Experiment set10S422 for Enterobacter sp. TBS_079

Compare to:

Cytidine nitrogen source

200 most important genes:

  gene name fitness t score description  
MPMX20_03771 -6.7 -7.9 D-3-phosphoglycerate dehydrogenase compare
MPMX20_03681 -6.6 -6.4 Amino-acid acetyltransferase compare
MPMX20_03002 -6.5 -6.3 Histidinol dehydrogenase compare
MPMX20_00927 -6.4 -8.8 Glutamate 5-kinase compare
MPMX20_00693 -6.3 -6.2 Phosphoserine phosphatase compare
MPMX20_01566 -6.3 -11.4 Phosphoserine aminotransferase compare
MPMX20_03006 -6.3 -4.4 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX20_03001 -6.3 -4.4 ATP phosphoribosyltransferase compare
MPMX20_00766 -6.2 -4.3 3-isopropylmalate dehydratase small subunit 1 compare
MPMX20_04531 -6.2 -4.3 Cystathionine gamma-synthase compare
MPMX20_00710 -6.2 -7.4 Bifunctional aspartokinase/homoserine dehydrogenase 1 compare
MPMX20_04127 -6.2 -7.4 Glutamate synthase [NADPH] small chain compare
MPMX20_03003 -6.1 -7.2 Histidinol-phosphate aminotransferase compare
MPMX20_02510 -6.1 -11.0 Anthranilate synthase component 1 compare
MPMX20_00768 -6.1 -8.3 3-isopropylmalate dehydrogenase compare
MPMX20_04126 -6.0 -15.1 Glutamate synthase [NADPH] large chain compare
MPMX20_03004 -6.0 -5.9 Histidine biosynthesis bifunctional protein HisB compare
MPMX20_01098 -6.0 -4.2 N5-carboxyaminoimidazole ribonucleotide mutase compare
MPMX20_00711 -6.0 -5.8 Homoserine kinase compare
MPMX20_03354 -6.0 -10.7 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX20_04498 -6.0 -5.8 L-threonine dehydratase biosynthetic IlvA compare
MPMX20_02512 -6.0 -5.8 Tryptophan biosynthesis protein TrpCF compare
MPMX20_00928 -5.9 -7.1 Gamma-glutamyl phosphate reductase compare
MPMX20_02511 -5.9 -8.1 Bifunctional protein TrpGD compare
MPMX20_03008 -5.9 -8.1 Histidine biosynthesis bifunctional protein HisIE compare
MPMX20_03338 -5.9 -4.1 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_04499 -5.9 -9.0 Dihydroxy-acid dehydratase compare
MPMX20_03007 -5.8 -5.7 Imidazole glycerol phosphate synthase subunit HisF compare
MPMX20_04497 -5.8 -5.7 HTH-type transcriptional regulator GltC compare
MPMX20_03426 -5.8 -10.4 Phosphoribosylformylglycinamidine synthase compare
MPMX20_01551 -5.8 -4.0 Leucine-responsive regulatory protein compare
MPMX20_00712 -5.8 -6.9 Threonine synthase compare
MPMX20_04524 -5.7 -9.6 Phosphoenolpyruvate carboxylase compare
MPMX20_00230 -5.7 -6.8 Homoserine O-succinyltransferase compare
MPMX20_03705 -5.6 -5.5 Diaminopimelate decarboxylase compare
MPMX20_00831 -5.6 -6.7 RNA polymerase-binding transcription factor DksA compare
MPMX20_03852 -5.6 -10.7 Cystathionine beta-lyase MetC compare
MPMX20_03247 -5.6 -7.7 Amidophosphoribosyltransferase compare
MPMX20_00556 -5.6 -7.7 Ornithine carbamoyltransferase subunit F compare
MPMX20_00225 -5.5 -8.5 Phosphoribosylamine--glycine ligase compare
MPMX20_04521 -5.5 -5.4 Acetylglutamate kinase compare
MPMX20_04523 -5.5 -6.5 Acetylornithine deacetylase compare
MPMX20_04077 -5.4 -9.7 Argininosuccinate synthase compare
MPMX20_00226 -5.4 -6.4 Bifunctional purine biosynthesis protein PurH compare
MPMX20_03005 -5.4 -6.4 Imidazole glycerol phosphate synthase subunit HisH compare
MPMX20_03264 -5.3 -5.2 Chorismate synthase compare
MPMX20_01354 -5.3 -3.6 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_04597 -5.2 -6.2 DNA-binding transcriptional regulator NtrC compare
MPMX20_02513 -5.2 -11.7 Tryptophan synthase beta chain compare
MPMX20_02514 -5.2 -7.0 Tryptophan synthase alpha chain compare
MPMX20_00740 -5.1 -6.1 Carbamoyl-phosphate synthase large chain compare
MPMX20_00767 -5.0 -9.1 3-isopropylmalate dehydratase large subunit 1 compare
MPMX20_01097 -5.0 -7.6 N5-carboxyaminoimidazole ribonucleotide synthase compare
MPMX20_04520 -5.0 -8.3 Argininosuccinate lyase compare
MPMX20_03468 -5.0 -8.3 T-protein compare
MPMX20_03653 -4.9 -13.7 GTP pyrophosphokinase compare
MPMX20_04319 -4.8 -9.8 HTH-type transcriptional regulator GntR compare
MPMX20_04467 -4.7 -8.4 Diaminopimelate epimerase compare
MPMX20_03466 -4.7 -12.1 Bifunctional chorismate mutase/prephenate dehydratase compare
MPMX20_01567 -4.7 -6.4 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_00739 -4.7 -3.2 Carbamoyl-phosphate synthase small chain compare
MPMX20_04522 -4.6 -7.1 N-acetyl-gamma-glutamyl-phosphate reductase compare
MPMX20_04596 -4.6 -9.3 Sensory histidine kinase/phosphatase NtrB compare
MPMX20_00976 -4.6 -3.1 Pyrroline-5-carboxylate reductase compare
MPMX20_01349 -4.5 -6.2 Citrate synthase compare
MPMX20_04552 -4.5 -5.4 ATP-dependent 6-phosphofructokinase isozyme 1 compare
MPMX20_01368 -4.5 -6.8 hypothetical protein compare
MPMX20_04496 -4.4 -7.4 Ketol-acid reductoisomerase (NADP(+)) compare
MPMX20_03706 -4.4 -10.2 Octopine catabolism/uptake operon regulatory protein OccR compare
MPMX20_01030 -4.4 -9.3 Lon protease compare
MPMX20_04189 -4.3 -5.1 Shikimate dehydrogenase (NADP(+)) compare
MPMX20_04162 -4.2 -4.1 3-dehydroquinate dehydratase compare
MPMX20_01548 -4.2 -5.0 putative ABC transporter ATP-binding/permease protein compare
MPMX20_04278 -3.9 -3.8 3-dehydroquinate synthase compare
MPMX20_03660 -3.9 -6.4 hypothetical protein compare
MPMX20_03356 -3.8 -17.0 Polyphosphate kinase compare
MPMX20_03090 -3.8 -1.9 Methionine--tRNA ligase compare
MPMX20_01366 -3.7 -4.6 Tol-Pal system protein TolQ compare
MPMX20_02770 -3.7 -6.5 Dihydroneopterin triphosphate diphosphatase compare
MPMX20_04624 -3.6 -10.4 Regulatory protein AsnC compare
MPMX20_01028 -3.6 -2.5 ATP-dependent Clp protease proteolytic subunit compare
MPMX20_01286 -3.6 -2.8 Sec-independent protein translocase protein TatE compare
MPMX20_03409 -3.5 -3.4 Iron-binding protein IscA compare
MPMX20_03318 -3.5 -5.6 Dye-decolorizing peroxidase YfeX compare
MPMX20_01549 -3.5 -5.2 ATP-binding/permease protein CydD compare
MPMX20_02755 -3.4 -5.3 KHG/KDPG aldolase compare
MPMX20_04275 -3.4 -2.4 Ribulose-phosphate 3-epimerase compare
MPMX20_04559 -3.4 -4.5 Superoxide dismutase [Mn] compare
MPMX20_04279 -3.4 -4.0 Shikimate kinase 1 compare
MPMX20_01367 -3.4 -7.4 Tol-Pal system protein TolR compare
MPMX20_00769 -3.4 -9.8 2-isopropylmalate synthase compare
MPMX20_01369 -3.3 -11.9 Tol-Pal system protein TolB compare
MPMX20_01355 -3.2 -1.7 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_03641 -3.1 -7.4 Phosphoadenosine phosphosulfate reductase compare
MPMX20_03382 -3.1 -2.1 Inosine-5'-monophosphate dehydrogenase compare
MPMX20_04595 -3.1 -2.1 Glutamine synthetase compare
MPMX20_00197 -3.1 -2.8 tRNA-Tyr compare
MPMX20_04262 -3.0 -6.5 Acetylornithine/succinyldiaminopimelate aminotransferase compare
MPMX20_03683 -2.9 -2.0 RecBCD enzyme subunit RecB compare
MPMX20_01382 -2.8 -2.7 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
MPMX20_03309 -2.8 -3.8 Phosphocarrier protein HPr compare
MPMX20_03753 -2.8 -6.7 Tyrosine recombinase XerD compare
MPMX20_02766 -2.7 -5.0 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_04650 -2.6 -5.0 tRNA modification GTPase MnmE compare
MPMX20_02768 -2.5 -3.2 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_04119 -2.5 -3.0 DNA polymerase III subunit chi compare
MPMX20_03408 -2.5 -2.9 Co-chaperone protein HscB compare
MPMX20_01029 -2.4 -4.9 ATP-dependent Clp protease ATP-binding subunit ClpX compare
MPMX20_03780 -2.4 -5.3 Transketolase 1 compare
MPMX20_00807 -2.4 -2.8 Pyruvate dehydrogenase E1 component compare
MPMX20_03642 -2.4 -10.6 Sulfite reductase [NADPH] hemoprotein beta-component compare
MPMX20_01851 -2.3 -5.1 Putative NAD(P)H nitroreductase YdjA compare
MPMX20_03685 -2.3 -5.1 RecBCD enzyme subunit RecC compare
MPMX20_04626 -2.3 -4.6 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_04642 -2.3 -2.7 Phosphate import ATP-binding protein PstB compare
MPMX20_03308 -2.3 -7.4 Cysteine synthase A compare
MPMX20_01362 -2.3 -6.1 Cytochrome bd-I ubiquinol oxidase subunit 2 compare
MPMX20_02993 -2.3 -5.4 hypothetical protein compare
MPMX20_01042 -2.2 -3.4 Nitrogen regulatory protein P-II 2 compare
MPMX20_04529 -2.2 -5.1 5,10-methylenetetrahydrofolate reductase compare
MPMX20_01320 -2.2 -10.9 Asparagine synthetase B [glutamine-hydrolyzing] compare
MPMX20_01370 -2.1 -2.9 Peptidoglycan-associated lipoprotein compare
MPMX20_04639 -2.1 -2.0 Phosphate-binding protein PstS compare
MPMX20_01361 -2.1 -7.6 Cytochrome bd-I ubiquinol oxidase subunit 1 compare
MPMX20_03643 -2.0 -8.6 Sulfite reductase [NADPH] flavoprotein alpha-component compare
MPMX20_03580 -2.0 -5.8 Protein RecA compare
MPMX20_02767 -2.0 -4.3 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_03407 -1.9 -4.0 Chaperone protein HscA compare
MPMX20_03248 -1.9 -2.1 Colicin V production protein compare
MPMX20_01972 -1.9 -1.3 tRNA-Val compare
MPMX20_01552 -1.9 -4.4 hypothetical protein compare
MPMX20_01043 -1.8 -9.8 Ammonia channel compare
MPMX20_02546 -1.8 -2.7 hypothetical protein compare
MPMX20_04276 -1.8 -5.4 DNA adenine methylase compare
MPMX20_04504 -1.8 -2.6 hypothetical protein compare
MPMX20_00084 -1.7 -8.4 ATP-dependent DNA helicase RecG compare
MPMX20_01901 -1.7 -2.6 Integration host factor subunit alpha compare
MPMX20_01570 -1.7 -2.3 Integration host factor subunit beta compare
MPMX20_01984 -1.7 -2.3 Ribonuclease T compare
MPMX20_03440 -1.7 -4.5 Elongation factor 4 compare
MPMX20_01447 -1.6 -6.2 Transcriptional regulator MntR compare
MPMX20_00492 -1.6 -6.7 3'(2'),5'-bisphosphate nucleotidase CysQ compare
MPMX20_00812 -1.6 -6.2 Aconitate hydratase B compare
MPMX20_04502 -1.6 -8.5 Acetolactate synthase isozyme 2 large subunit compare
MPMX20_01624 -1.6 -4.4 tRNA-Ser compare
MPMX20_02596 -1.5 -8.6 Formyltetrahydrofolate deformylase compare
MPMX20_02646 -1.5 -2.5 hypothetical protein compare
MPMX20_03636 -1.5 -3.6 Adenylyl-sulfate kinase compare
MPMX20_04469 -1.5 -2.7 Adenylate cyclase compare
MPMX20_00708 -1.5 -4.1 Aerobic respiration control protein ArcA compare
MPMX20_03221 -1.5 -5.7 5'-deoxynucleotidase YfbR compare
MPMX20_04465 -1.4 -4.9 Tyrosine recombinase XerC compare
MPMX20_03226 -1.4 -3.6 Acetate kinase compare
MPMX20_03590 -1.4 -1.8 hypothetical protein compare
MPMX20_00030 -1.4 -2.5 hypothetical protein compare
MPMX20_03445 -1.4 -6.5 L-aspartate oxidase compare
MPMX20_01446 -1.4 -2.6 Small protein MntS compare
MPMX20_04463 -1.4 -4.7 DNA helicase II compare
MPMX20_00825 -1.3 -1.3 Aspartate 1-decarboxylase compare
MPMX20_04692 -1.3 -1.5 hypothetical protein compare
MPMX20_01377 -1.3 -5.0 Quinolinate synthase A compare
MPMX20_04641 -1.3 -2.5 Phosphate transport system permease protein PstA compare
MPMX20_00745 -1.3 -3.1 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical compare
MPMX20_03469 -1.3 -4.7 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive compare
MPMX20_00923 -1.2 -4.3 Xanthine phosphoribosyltransferase compare
MPMX20_00031 -1.2 -6.5 Acetolactate synthase isozyme 1 large subunit compare
MPMX20_04066 -1.2 -1.4 ATP-dependent RNA helicase DeaD compare
MPMX20_04393 -1.2 -4.2 Low-affinity inorganic phosphate transporter 1 compare
MPMX20_03310 -1.2 -3.8 Phosphoenolpyruvate-protein phosphotransferase compare
MPMX20_01586 -1.2 -6.9 Aspartate aminotransferase compare
MPMX20_00570 -1.1 -6.6 putative BsuMI modification methylase subunit YdiO compare
MPMX20_01691 -1.1 -1.8 hypothetical protein compare
MPMX20_01005 -1.1 -2.0 Transcriptional repressor NrdR compare
MPMX20_03209 -1.1 -1.5 NADH-quinone oxidoreductase subunit K compare
MPMX20_02857 -1.1 -5.6 Flagellar protein FliT compare
MPMX20_02025 -1.1 -4.3 hypothetical protein compare
MPMX20_01607 -1.1 -3.0 Outer membrane protein A compare
MPMX20_00480 -1.1 -2.7 50S ribosomal protein L9 compare
MPMX20_03047 -1.1 -3.1 dCTP deaminase compare
MPMX20_00453 -1.1 -1.8 RNA-binding protein Hfq compare
MPMX20_00639 -1.1 -2.7 5-carboxymethyl-2-hydroxymuconate Delta-isomerase compare
MPMX20_00716 -1.1 -2.7 Transaldolase B compare
MPMX20_03571 -1.0 -1.4 tRNA-Arg compare
MPMX20_01256 -1.0 -2.0 hypothetical protein compare
MPMX20_04452 -1.0 -4.8 HTH-type transcriptional regulator MetR compare
MPMX20_02696 -1.0 -3.9 Murein tetrapeptide carboxypeptidase compare
MPMX20_03447 -1.0 -3.6 ATP-dependent RNA helicase SrmB compare
MPMX20_04501 -1.0 -2.5 Acetolactate synthase isozyme 2 small subunit compare
MPMX20_02542 -1.0 -3.1 HTH-type transcriptional activator RhaR compare
MPMX20_04443 -1.0 -1.6 Sec-independent protein translocase protein TatB compare
MPMX20_03509 -1.0 -1.4 hypothetical protein compare
MPMX20_04685 -1.0 -3.3 hypothetical protein compare
MPMX20_01855 -0.9 -2.0 hypothetical protein compare
MPMX20_00086 -0.9 -2.1 Bifunctional (p)ppGpp synthase/hydrolase SpoT compare
MPMX20_04545 -0.9 -3.0 Flavodoxin/ferredoxin--NADP reductase compare
MPMX20_03945 -0.9 -1.9 hypothetical protein compare
MPMX20_03629 -0.9 -2.2 Protein-L-isoaspartate O-methyltransferase compare
MPMX20_04111 -0.9 -2.4 RNase adapter protein RapZ compare
MPMX20_01333 -0.9 -2.8 Negative modulator of initiation of replication compare
MPMX20_04505 -0.9 -3.7 HTH-type transcriptional regulator HdfR compare


Specific Phenotypes

For 2 genes in this experiment

For nitrogen source Cytidine in Enterobacter sp. TBS_079

For nitrogen source Cytidine across organisms