Experiment set10S411 for Enterobacter sp. TBS_079

Compare to:

Gelatin nitrogen source

200 most important genes:

  gene name fitness t score description  
MPMX20_02372 -4.7 -3.3 HTH-type transcriptional repressor NsrR compare
MPMX20_04344 -4.3 -2.0 hypothetical protein compare
MPMX20_02826 -3.7 -2.5 Cold shock-like protein CspB compare
MPMX20_00764 -3.5 -1.6 hypothetical protein compare
MPMX20_02203 -3.4 -2.9 hypothetical protein compare
MPMX20_04272 -3.3 -1.3 hypothetical protein compare
MPMX20_01028 -3.2 -2.2 ATP-dependent Clp protease proteolytic subunit compare
MPMX20_03408 -3.2 -2.2 Co-chaperone protein HscB compare
MPMX20_04440 -3.2 -1.7 Transcription antitermination protein RfaH compare
MPMX20_03653 -3.1 -9.5 GTP pyrophosphokinase compare
MPMX20_04119 -3.0 -2.1 DNA polymerase III subunit chi compare
MPMX20_04642 -2.9 -2.0 Phosphate import ATP-binding protein PstB compare
MPMX20_01549 -2.8 -4.7 ATP-binding/permease protein CydD compare
MPMX20_00693 -2.8 -5.7 Phosphoserine phosphatase compare
MPMX20_04595 -2.8 -1.9 Glutamine synthetase compare
MPMX20_03435 -2.7 -2.3 Pyridoxine 5'-phosphate synthase compare
MPMX20_00441 -2.7 -1.0 Phosphatidylserine decarboxylase proenzyme compare
MPMX20_03318 -2.7 -3.9 Dye-decolorizing peroxidase YfeX compare
MPMX20_00801 -2.6 -2.9 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD compare
MPMX20_00262 -2.6 -2.9 Zinc uptake regulation protein compare
MPMX20_04029 -2.6 -3.4 Cyclic dipyrimidine nucleotide synthase compare
MPMX20_02701 -2.5 -2.9 Fatty acid metabolism regulator protein compare
MPMX20_00728 -2.4 -0.9 FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase compare
MPMX20_03685 -2.4 -3.7 RecBCD enzyme subunit RecC compare
MPMX20_03309 -2.4 -3.0 Phosphocarrier protein HPr compare
MPMX20_04253 -2.4 -0.9 Malonate decarboxylase acyl carrier protein compare
MPMX20_03580 -2.3 -6.0 Protein RecA compare
MPMX20_03407 -2.3 -3.8 Chaperone protein HscA compare
MPMX20_03683 -2.3 -3.7 RecBCD enzyme subunit RecB compare
MPMX20_03571 -2.2 -1.5 tRNA-Arg compare
MPMX20_01030 -2.1 -5.9 Lon protease compare
MPMX20_03409 -2.1 -2.3 Iron-binding protein IscA compare
MPMX20_02514 -2.0 -2.5 Tryptophan synthase alpha chain compare
MPMX20_04597 -2.0 -5.8 DNA-binding transcriptional regulator NtrC compare
MPMX20_02635 -2.0 -2.5 Release factor glutamine methyltransferase compare
MPMX20_04162 -2.0 -3.5 3-dehydroquinate dehydratase compare
MPMX20_01551 -1.9 -3.9 Leucine-responsive regulatory protein compare
MPMX20_02121 -1.9 -2.7 hypothetical protein compare
MPMX20_04189 -1.9 -4.6 Shikimate dehydrogenase (NADP(+)) compare
MPMX20_01566 -1.9 -6.9 Phosphoserine aminotransferase compare
MPMX20_04596 -1.8 -5.4 Sensory histidine kinase/phosphatase NtrB compare
MPMX20_03705 -1.8 -5.6 Diaminopimelate decarboxylase compare
MPMX20_00766 -1.8 -2.9 3-isopropylmalate dehydratase small subunit 1 compare
MPMX20_01134 -1.8 -2.2 hypothetical protein compare
MPMX20_04330 -1.8 -3.8 High-affinity branched-chain amino acid transport ATP-binding protein LivF compare
MPMX20_01989 -1.8 -2.8 hypothetical protein compare
MPMX20_00093 -1.7 -4.9 Orotate phosphoribosyltransferase compare
MPMX20_03005 -1.7 -4.4 Imidazole glycerol phosphate synthase subunit HisH compare
MPMX20_04559 -1.7 -2.3 Superoxide dismutase [Mn] compare
MPMX20_03002 -1.7 -5.0 Histidinol dehydrogenase compare
MPMX20_04278 -1.7 -3.6 3-dehydroquinate synthase compare
MPMX20_03440 -1.7 -3.7 Elongation factor 4 compare
MPMX20_00831 -1.6 -4.1 RNA polymerase-binding transcription factor DksA compare
MPMX20_04626 -1.6 -3.3 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_04624 -1.6 -4.5 Regulatory protein AsnC compare
MPMX20_04275 -1.6 -1.8 Ribulose-phosphate 3-epimerase compare
MPMX20_00712 -1.6 -6.5 Threonine synthase compare
MPMX20_00029 -1.6 -3.2 hypothetical protein compare
MPMX20_00775 -1.6 -1.8 Ribosomal RNA small subunit methyltransferase H compare
MPMX20_02753 -1.6 -2.6 Inner membrane protein YebE compare
MPMX20_04066 -1.6 -1.5 ATP-dependent RNA helicase DeaD compare
MPMX20_00739 -1.5 -3.7 Carbamoyl-phosphate synthase small chain compare
MPMX20_02477 -1.5 -2.9 Peptide transport system ATP-binding protein SapD compare
MPMX20_01741 -1.5 -3.7 Dihydroorotase compare
MPMX20_02513 -1.5 -5.5 Tryptophan synthase beta chain compare
MPMX20_04496 -1.5 -4.5 Ketol-acid reductoisomerase (NADP(+)) compare
MPMX20_01354 -1.5 -2.0 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_00928 -1.5 -4.7 Gamma-glutamyl phosphate reductase compare
MPMX20_03771 -1.5 -4.9 D-3-phosphoglycerate dehydrogenase compare
MPMX20_01542 -1.5 -1.7 Cold shock-like protein CspD compare
MPMX20_03466 -1.5 -4.9 Bifunctional chorismate mutase/prephenate dehydratase compare
MPMX20_01567 -1.5 -3.4 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_01943 -1.5 -3.8 Protein SufA compare
MPMX20_04523 -1.5 -4.3 Acetylornithine deacetylase compare
MPMX20_04498 -1.5 -4.5 L-threonine dehydratase biosynthetic IlvA compare
MPMX20_00927 -1.5 -5.5 Glutamate 5-kinase compare
MPMX20_03852 -1.4 -5.8 Cystathionine beta-lyase MetC compare
MPMX20_02576 -1.4 -2.0 Protein TonB compare
MPMX20_00032 -1.4 -1.5 Acetolactate synthase isozyme 1 small subunit compare
MPMX20_03004 -1.4 -4.4 Histidine biosynthesis bifunctional protein HisB compare
MPMX20_00680 -1.4 -2.9 Deoxyribose-phosphate aldolase compare
MPMX20_03706 -1.4 -3.6 Octopine catabolism/uptake operon regulatory protein OccR compare
MPMX20_02546 -1.4 -2.2 hypothetical protein compare
MPMX20_00086 -1.4 -2.4 Bifunctional (p)ppGpp synthase/hydrolase SpoT compare
MPMX20_03037 -1.4 -4.4 hypothetical protein compare
MPMX20_02769 -1.4 -1.2 putative transcriptional regulatory protein YebC compare
MPMX20_01019 -1.4 -2.6 Protoheme IX farnesyltransferase compare
MPMX20_04495 -1.4 -2.7 Peptidyl-prolyl cis-trans isomerase C compare
MPMX20_01704 -1.4 -2.0 hypothetical protein compare
MPMX20_04531 -1.4 -4.6 Cystathionine gamma-synthase compare
MPMX20_02475 -1.3 -2.9 Putrescine export system permease protein SapB compare
MPMX20_04126 -1.3 -6.5 Glutamate synthase [NADPH] large chain compare
MPMX20_01837 -1.3 -1.2 hypothetical protein compare
MPMX20_01351 -1.3 -2.2 Succinate dehydrogenase hydrophobic membrane anchor subunit compare
MPMX20_04276 -1.3 -2.9 DNA adenine methylase compare
MPMX20_01320 -1.3 -4.6 Asparagine synthetase B [glutamine-hydrolyzing] compare
MPMX20_03008 -1.3 -2.8 Histidine biosynthesis bifunctional protein HisIE compare
MPMX20_02542 -1.3 -2.4 HTH-type transcriptional activator RhaR compare
MPMX20_04132 -1.3 -2.6 Stringent starvation protein B compare
MPMX20_02549 -1.3 -2.8 hypothetical protein compare
MPMX20_04393 -1.3 -3.5 Low-affinity inorganic phosphate transporter 1 compare
MPMX20_02512 -1.3 -4.6 Tryptophan biosynthesis protein TrpCF compare
MPMX20_00807 -1.3 -2.9 Pyruvate dehydrogenase E1 component compare
MPMX20_00768 -1.3 -4.6 3-isopropylmalate dehydrogenase compare
MPMX20_00214 -1.3 -2.5 Sulfur carrier protein ThiS compare
MPMX20_03681 -1.3 -4.5 Amino-acid acetyltransferase compare
MPMX20_02106 -1.3 -2.8 hypothetical protein compare
MPMX20_03346 -1.3 -2.4 hypothetical protein compare
MPMX20_03862 -1.2 -2.8 Protein YgiW compare
MPMX20_00740 -1.2 -4.1 Carbamoyl-phosphate synthase large chain compare
MPMX20_00929 -1.2 -1.1 tRNA-Thr compare
MPMX20_02574 -1.2 -1.8 putative intracellular septation protein A compare
MPMX20_03260 -1.2 -1.3 hypothetical protein compare
MPMX20_01548 -1.2 -2.2 putative ABC transporter ATP-binding/permease protein compare
MPMX20_02114 -1.2 -2.3 hypothetical protein compare
MPMX20_00014 -1.2 -3.1 hypothetical protein compare
MPMX20_04499 -1.2 -4.2 Dihydroxy-acid dehydratase compare
MPMX20_04277 -1.2 -3.3 Cell division protein DamX compare
MPMX20_03356 -1.2 -5.2 Polyphosphate kinase compare
MPMX20_04306 -1.2 -2.0 Glycerol-3-phosphate regulon repressor compare
MPMX20_03310 -1.2 -2.7 Phosphoenolpyruvate-protein phosphotransferase compare
MPMX20_03753 -1.2 -2.8 Tyrosine recombinase XerD compare
MPMX20_01552 -1.2 -3.2 hypothetical protein compare
MPMX20_01361 -1.2 -3.0 Cytochrome bd-I ubiquinol oxidase subunit 1 compare
MPMX20_04759 -1.2 -1.7 IS3 family transposase ISYen3 compare
MPMX20_01467 -1.2 -2.9 Molybdopterin molybdenumtransferase compare
MPMX20_00710 -1.2 -4.8 Bifunctional aspartokinase/homoserine dehydrogenase 1 compare
MPMX20_00721 -1.2 -1.7 Chaperone protein DnaJ compare
MPMX20_01596 -1.2 -7.6 Dihydroorotate dehydrogenase (quinone) compare
MPMX20_02275 -1.2 -1.6 Acetyltransferase compare
MPMX20_04524 -1.1 -4.7 Phosphoenolpyruvate carboxylase compare
MPMX20_00812 -1.1 -4.1 Aconitate hydratase B compare
MPMX20_00031 -1.1 -5.2 Acetolactate synthase isozyme 1 large subunit compare
MPMX20_00745 -1.1 -1.9 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical compare
MPMX20_02382 -1.1 -3.3 hypothetical protein compare
MPMX20_02102 -1.1 -1.0 hypothetical protein compare
MPMX20_04077 -1.1 -4.1 Argininosuccinate synthase compare
MPMX20_01366 -1.1 -1.9 Tol-Pal system protein TolQ compare
MPMX20_04641 -1.1 -1.7 Phosphate transport system permease protein PstA compare
MPMX20_00542 -1.1 -2.7 2-iminobutanoate/2-iminopropanoate deaminase compare
MPMX20_03780 -1.1 -2.6 Transketolase 1 compare
MPMX20_04668 -1.1 -1.7 hypothetical protein compare
MPMX20_04127 -1.1 -4.0 Glutamate synthase [NADPH] small chain compare
MPMX20_03006 -1.1 -2.7 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX20_02305 -1.1 -1.5 hypothetical protein compare
MPMX20_01906 -1.1 -5.3 Anti-FlhC(2)FlhD(4) factor YdiV compare
MPMX20_01355 -1.1 -0.7 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_04520 -1.1 -4.5 Argininosuccinate lyase compare
MPMX20_04650 -1.1 -2.6 tRNA modification GTPase MnmE compare
MPMX20_04497 -1.1 -2.5 HTH-type transcriptional regulator GltC compare
MPMX20_00350 -1.1 -2.7 hypothetical protein compare
MPMX20_03007 -1.1 -2.6 Imidazole glycerol phosphate synthase subunit HisF compare
MPMX20_03599 -1.0 -2.3 HTH-type transcriptional regulator AscG compare
MPMX20_04457 -1.0 -2.3 Threonine efflux protein compare
MPMX20_01029 -1.0 -1.9 ATP-dependent Clp protease ATP-binding subunit ClpX compare
MPMX20_04686 -1.0 -3.5 Phospholipase D compare
MPMX20_03135 -1.0 -1.1 hypothetical protein compare
MPMX20_04140 -1.0 -3.0 Malate dehydrogenase compare
MPMX20_02287 -1.0 -1.1 hypothetical protein compare
MPMX20_03090 -1.0 -0.7 Methionine--tRNA ligase compare
MPMX20_00266 -1.0 -1.5 Phage shock protein G compare
MPMX20_03278 -1.0 -1.4 hypothetical protein compare
MPMX20_04319 -1.0 -3.2 HTH-type transcriptional regulator GntR compare
MPMX20_02510 -1.0 -4.1 Anthranilate synthase component 1 compare
MPMX20_02825 -1.0 -1.7 Cold shock-like protein CspB compare
MPMX20_02511 -1.0 -3.8 Bifunctional protein TrpGD compare
MPMX20_00176 -1.0 -1.4 Cold shock protein CspA compare
MPMX20_04460 -1.0 -1.7 hypothetical protein compare
MPMX20_02696 -1.0 -2.8 Murein tetrapeptide carboxypeptidase compare
MPMX20_00785 -1.0 -1.5 D-alanine--D-alanine ligase B compare
MPMX20_02344 -1.0 -1.0 hypothetical protein compare
MPMX20_04522 -1.0 -2.6 N-acetyl-gamma-glutamyl-phosphate reductase compare
MPMX20_00393 -1.0 -2.4 hypothetical protein compare
MPMX20_02591 -1.0 -2.2 DNA-binding protein H-NS compare
MPMX20_03687 -1.0 -0.8 hypothetical protein compare
MPMX20_02646 -1.0 -0.7 hypothetical protein compare
MPMX20_01695 -0.9 -1.2 putative malonic semialdehyde reductase RutE compare
MPMX20_03767 -0.9 -2.7 Xaa-Pro aminopeptidase compare
MPMX20_01349 -0.9 -2.1 Citrate synthase compare
MPMX20_03285 -0.9 -0.7 hypothetical protein compare
MPMX20_02624 -0.9 -2.1 Nitrate/nitrite binding protein NrtA compare
MPMX20_03003 -0.9 -3.2 Histidinol-phosphate aminotransferase compare
MPMX20_02768 -0.9 -1.1 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_00617 -0.9 -1.8 hypothetical protein compare
MPMX20_01434 -0.9 -0.8 putative protein YbiI compare
MPMX20_00976 -0.9 -2.6 Pyrroline-5-carboxylate reductase compare
MPMX20_01444 -0.9 -2.5 Outer membrane protein X compare
MPMX20_04505 -0.9 -2.8 HTH-type transcriptional regulator HdfR compare
MPMX20_04467 -0.9 -2.6 Diaminopimelate epimerase compare
MPMX20_00226 -0.9 -3.0 Bifunctional purine biosynthesis protein PurH compare
MPMX20_02368 -0.9 -1.6 Stationary-phase-induced ribosome-associated protein compare
MPMX20_01942 -0.9 -2.3 HTH-type transcriptional repressor BluR compare
MPMX20_01308 -0.9 -2.6 Magnesium and cobalt efflux protein CorC compare
MPMX20_04035 -0.9 -2.2 hypothetical protein compare
MPMX20_00767 -0.9 -2.9 3-isopropylmalate dehydratase large subunit 1 compare
MPMX20_02478 -0.9 -2.8 Putrescine export system ATP-binding protein SapF compare
MPMX20_04058 -0.9 -1.7 hypothetical protein compare
MPMX20_04504 -0.9 -1.0 hypothetical protein compare
MPMX20_02845 -0.9 -3.3 L-cystine-binding protein FliY compare
MPMX20_04575 -0.9 -2.5 Formate dehydrogenase-O major subunit compare


Specific Phenotypes

None in this experiment

For Enterobacter sp. TBS_079 in nitrogen source experiments

For nitrogen source Gelatin across organisms