Experiment set10S408 for Enterobacter sp. TBS_079

Compare to:

Gly-Glu nitrogen source

200 most important genes:

  gene name fitness t score description  
MPMX20_00927 -6.6 -4.6 Glutamate 5-kinase compare
MPMX20_00928 -6.0 -4.2 Gamma-glutamyl phosphate reductase compare
MPMX20_03002 -6.0 -8.2 Histidinol dehydrogenase compare
MPMX20_02514 -6.0 -4.1 Tryptophan synthase alpha chain compare
MPMX20_03001 -5.9 -5.8 ATP phosphoribosyltransferase compare
MPMX20_00710 -5.9 -7.0 Bifunctional aspartokinase/homoserine dehydrogenase 1 compare
MPMX20_03008 -5.7 -6.8 Histidine biosynthesis bifunctional protein HisIE compare
MPMX20_03852 -5.7 -6.8 Cystathionine beta-lyase MetC compare
MPMX20_03466 -5.7 -5.6 Bifunctional chorismate mutase/prephenate dehydratase compare
MPMX20_03354 -5.7 -9.5 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX20_01320 -5.6 -8.6 Asparagine synthetase B [glutamine-hydrolyzing] compare
MPMX20_03468 -5.6 -3.9 T-protein compare
MPMX20_03006 -5.6 -6.7 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX20_04077 -5.6 -5.5 Argininosuccinate synthase compare
MPMX20_02510 -5.6 -11.3 Anthranilate synthase component 1 compare
MPMX20_02513 -5.6 -7.6 Tryptophan synthase beta chain compare
MPMX20_00230 -5.5 -5.4 Homoserine O-succinyltransferase compare
MPMX20_00768 -5.5 -10.6 3-isopropylmalate dehydrogenase compare
MPMX20_03003 -5.5 -7.6 Histidinol-phosphate aminotransferase compare
MPMX20_00544 -5.5 -3.8 Aspartate carbamoyltransferase catalytic subunit compare
MPMX20_00556 -5.5 -7.5 Ornithine carbamoyltransferase subunit F compare
MPMX20_03005 -5.5 -3.8 Imidazole glycerol phosphate synthase subunit HisH compare
MPMX20_01098 -5.4 -5.3 N5-carboxyaminoimidazole ribonucleotide mutase compare
MPMX20_04531 -5.4 -6.5 Cystathionine gamma-synthase compare
MPMX20_00711 -5.4 -8.2 Homoserine kinase compare
MPMX20_00712 -5.3 -7.3 Threonine synthase compare
MPMX20_00767 -5.3 -7.3 3-isopropylmalate dehydratase large subunit 1 compare
MPMX20_04498 -5.3 -6.3 L-threonine dehydratase biosynthetic IlvA compare
MPMX20_03007 -5.2 -6.2 Imidazole glycerol phosphate synthase subunit HisF compare
MPMX20_00831 -5.2 -6.2 RNA polymerase-binding transcription factor DksA compare
MPMX20_04497 -5.2 -6.2 HTH-type transcriptional regulator GltC compare
MPMX20_02511 -5.2 -10.0 Bifunctional protein TrpGD compare
MPMX20_03338 -5.2 -5.0 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_03705 -5.2 -6.2 Diaminopimelate decarboxylase compare
MPMX20_04522 -5.2 -3.6 N-acetyl-gamma-glutamyl-phosphate reductase compare
MPMX20_04597 -5.1 -5.0 DNA-binding transcriptional regulator NtrC compare
MPMX20_03004 -5.1 -9.1 Histidine biosynthesis bifunctional protein HisB compare
MPMX20_03247 -5.1 -7.7 Amidophosphoribosyltransferase compare
MPMX20_03653 -5.1 -10.8 GTP pyrophosphokinase compare
MPMX20_04521 -5.1 -4.9 Acetylglutamate kinase compare
MPMX20_00226 -5.0 -6.0 Bifunctional purine biosynthesis protein PurH compare
MPMX20_02512 -5.0 -9.1 Tryptophan biosynthesis protein TrpCF compare
MPMX20_03264 -5.0 -4.9 Chorismate synthase compare
MPMX20_03706 -5.0 -7.7 Octopine catabolism/uptake operon regulatory protein OccR compare
MPMX20_00740 -5.0 -4.9 Carbamoyl-phosphate synthase large chain compare
MPMX20_01354 -5.0 -3.4 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_03426 -4.9 -13.9 Phosphoribosylformylglycinamidine synthase compare
MPMX20_04499 -4.9 -11.5 Dihydroxy-acid dehydratase compare
MPMX20_04523 -4.9 -7.5 Acetylornithine deacetylase compare
MPMX20_04520 -4.8 -7.4 Argininosuccinate lyase compare
MPMX20_02494 -4.8 -5.7 Orotidine 5'-phosphate decarboxylase compare
MPMX20_01567 -4.7 -3.3 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_00922 -4.6 -13.3 Cytosol non-specific dipeptidase compare
MPMX20_00766 -4.6 -7.0 3-isopropylmalate dehydratase small subunit 1 compare
MPMX20_01355 -4.6 -1.8 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_03318 -4.6 -5.5 Dye-decolorizing peroxidase YfeX compare
MPMX20_01596 -4.5 -14.8 Dihydroorotate dehydrogenase (quinone) compare
MPMX20_04532 -4.5 -4.3 Met repressor compare
MPMX20_04162 -4.4 -3.1 3-dehydroquinate dehydratase compare
MPMX20_00225 -4.4 -10.7 Phosphoribosylamine--glycine ligase compare
MPMX20_00976 -4.3 -3.0 Pyrroline-5-carboxylate reductase compare
MPMX20_00093 -4.3 -4.2 Orotate phosphoribosyltransferase compare
MPMX20_01741 -4.3 -5.0 Dihydroorotase compare
MPMX20_00769 -4.2 -14.7 2-isopropylmalate synthase compare
MPMX20_04496 -4.2 -5.7 Ketol-acid reductoisomerase (NADP(+)) compare
MPMX20_04127 -4.1 -13.9 Glutamate synthase [NADPH] small chain compare
MPMX20_04126 -4.0 -19.6 Glutamate synthase [NADPH] large chain compare
MPMX20_00739 -4.0 -3.9 Carbamoyl-phosphate synthase small chain compare
MPMX20_01368 -4.0 -6.1 hypothetical protein compare
MPMX20_01097 -4.0 -7.7 N5-carboxyaminoimidazole ribonucleotide synthase compare
MPMX20_04189 -3.9 -4.7 Shikimate dehydrogenase (NADP(+)) compare
MPMX20_00453 -3.8 -2.6 RNA-binding protein Hfq compare
MPMX20_04319 -3.8 -10.2 HTH-type transcriptional regulator GntR compare
MPMX20_04278 -3.7 -3.6 3-dehydroquinate synthase compare
MPMX20_03090 -3.6 -2.0 Methionine--tRNA ligase compare
MPMX20_04596 -3.5 -10.5 Sensory histidine kinase/phosphatase NtrB compare
MPMX20_00452 -3.4 -7.3 tRNA dimethylallyltransferase compare
MPMX20_00086 -3.4 -3.7 Bifunctional (p)ppGpp synthase/hydrolase SpoT compare
MPMX20_04529 -3.3 -7.1 5,10-methylenetetrahydrofolate reductase compare
MPMX20_01366 -3.3 -5.5 Tol-Pal system protein TolQ compare
MPMX20_01370 -3.2 -4.4 Peptidoglycan-associated lipoprotein compare
MPMX20_01030 -3.2 -9.5 Lon protease compare
MPMX20_01369 -3.2 -9.7 Tol-Pal system protein TolB compare
MPMX20_04275 -3.2 -2.2 Ribulose-phosphate 3-epimerase compare
MPMX20_04194 -3.0 -2.4 Peptide deformylase compare
MPMX20_01549 -3.0 -4.5 ATP-binding/permease protein CydD compare
MPMX20_01028 -3.0 -2.8 ATP-dependent Clp protease proteolytic subunit compare
MPMX20_01548 -2.9 -5.8 putative ABC transporter ATP-binding/permease protein compare
MPMX20_03580 -2.9 -6.4 Protein RecA compare
MPMX20_01352 -2.9 -9.1 Succinate dehydrogenase flavoprotein subunit compare
MPMX20_04641 -2.8 -2.0 Phosphate transport system permease protein PstA compare
MPMX20_04595 -2.8 -1.9 Glutamine synthetase compare
MPMX20_04624 -2.8 -8.1 Regulatory protein AsnC compare
MPMX20_03762 -2.8 -13.3 Glycine dehydrogenase (decarboxylating) conserved
MPMX20_04301 -2.8 -3.3 Fe/S biogenesis protein NfuA compare
MPMX20_01566 -2.8 -6.9 Phosphoserine aminotransferase compare
MPMX20_01984 -2.7 -3.2 Ribonuclease T compare
MPMX20_04640 -2.7 -3.2 Phosphate transport system permease protein PstC compare
MPMX20_01350 -2.7 -3.5 Succinate dehydrogenase cytochrome b556 subunit compare
MPMX20_02755 -2.6 -6.3 KHG/KDPG aldolase compare
MPMX20_04467 -2.6 -7.0 Diaminopimelate epimerase compare
MPMX20_02826 -2.6 -3.0 Cold shock-like protein CspB compare
MPMX20_04141 -2.6 -5.3 Arginine repressor compare
MPMX20_03382 -2.6 -2.5 Inosine-5'-monophosphate dehydrogenase compare
MPMX20_01446 -2.5 -3.7 Small protein MntS compare
MPMX20_03685 -2.5 -3.4 RecBCD enzyme subunit RecC compare
MPMX20_03683 -2.5 -3.0 RecBCD enzyme subunit RecB compare
MPMX20_00745 -2.5 -5.0 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical compare
MPMX20_04642 -2.5 -2.4 Phosphate import ATP-binding protein PstB compare
MPMX20_02768 -2.5 -3.8 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_03764 -2.4 -9.5 Aminomethyltransferase compare
MPMX20_01353 -2.4 -5.7 Succinate dehydrogenase iron-sulfur subunit compare
MPMX20_03763 -2.4 -5.0 Glycine cleavage system H protein compare
MPMX20_04552 -2.4 -4.8 ATP-dependent 6-phosphofructokinase isozyme 1 compare
MPMX20_01989 -2.4 -3.5 hypothetical protein compare
MPMX20_03671 -2.3 -8.1 Glycine cleavage system transcriptional activator compare
MPMX20_01362 -2.3 -5.7 Cytochrome bd-I ubiquinol oxidase subunit 2 compare
MPMX20_00102 -2.3 -3.5 hypothetical protein compare
MPMX20_02576 -2.2 -3.2 Protein TonB compare
MPMX20_04650 -2.1 -3.8 tRNA modification GTPase MnmE compare
MPMX20_04626 -2.1 -4.0 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_02767 -2.1 -3.6 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_04519 -2.1 -8.1 Hydrogen peroxide-inducible genes activator compare
MPMX20_03356 -2.1 -9.9 Polyphosphate kinase compare
MPMX20_03469 -2.0 -6.9 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive compare
MPMX20_01088 -2.0 -11.0 putative iron export ATP-binding protein FetA compare
MPMX20_01351 -2.0 -3.8 Succinate dehydrogenase hydrophobic membrane anchor subunit compare
MPMX20_02766 -2.0 -3.3 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_00626 -1.9 -1.8 hypothetical protein compare
MPMX20_03641 -1.9 -6.8 Phosphoadenosine phosphosulfate reductase compare
MPMX20_00807 -1.9 -2.9 Pyruvate dehydrogenase E1 component compare
MPMX20_03075 -1.8 -5.1 HTH-type transcriptional repressor NagR compare
MPMX20_03864 -1.8 -6.2 Sensor protein QseC compare
MPMX20_04492 -1.8 -6.0 ATP-dependent RNA helicase RhlB compare
MPMX20_02710 -1.8 -6.5 Ribonuclease D compare
MPMX20_00494 -1.7 -3.2 hypothetical protein compare
MPMX20_03028 -1.7 -9.3 Lipopolysaccharide biosynthesis protein WzxC compare
MPMX20_02635 -1.7 -2.7 Release factor glutamine methyltransferase compare
MPMX20_01089 -1.7 -7.1 putative iron export permease protein FetB compare
MPMX20_01382 -1.7 -2.5 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
MPMX20_01969 -1.7 -3.9 Carbonic anhydrase 1 compare
MPMX20_04444 -1.7 -1.5 Sec-independent protein translocase protein TatA compare
MPMX20_03227 -1.7 -4.7 Phosphate acetyltransferase compare
MPMX20_01367 -1.6 -3.6 Tol-Pal system protein TolR compare
MPMX20_00721 -1.6 -2.7 Chaperone protein DnaJ compare
MPMX20_00716 -1.6 -4.7 Transaldolase B compare
MPMX20_03308 -1.6 -5.7 Cysteine synthase A compare
MPMX20_04493 -1.6 -6.3 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase compare
MPMX20_04306 -1.6 -4.7 Glycerol-3-phosphate regulon repressor compare
MPMX20_02116 -1.6 -2.5 hypothetical protein compare
MPMX20_03042 -1.5 -8.5 Tyrosine-protein kinase wzc compare
MPMX20_03479 -1.5 -2.1 30S ribosomal protein S16 compare
MPMX20_01901 -1.5 -2.2 Integration host factor subunit alpha compare
MPMX20_01765 -1.5 -3.2 Ribonuclease E compare
MPMX20_03753 -1.5 -4.8 Tyrosine recombinase XerD compare
MPMX20_04685 -1.5 -5.9 hypothetical protein compare
MPMX20_01552 -1.5 -3.9 hypothetical protein compare
MPMX20_04279 -1.5 -2.5 Shikimate kinase 1 compare
MPMX20_03770 -1.5 -2.9 5-formyltetrahydrofolate cyclo-ligase compare
MPMX20_03396 -1.5 -4.8 Nucleoside diphosphate kinase compare
MPMX20_03407 -1.5 -3.1 Chaperone protein HscA compare
MPMX20_01950 -1.5 -3.1 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_04140 -1.4 -5.7 Malate dehydrogenase compare
MPMX20_00395 -1.4 -3.7 hypothetical protein compare
MPMX20_00492 -1.4 -6.0 3'(2'),5'-bisphosphate nucleotidase CysQ compare
MPMX20_02701 -1.4 -2.1 Fatty acid metabolism regulator protein compare
MPMX20_03629 -1.4 -4.0 Protein-L-isoaspartate O-methyltransferase compare
MPMX20_00844 -1.4 -4.8 Vitamin B12-binding protein compare
MPMX20_01042 -1.4 -3.1 Nitrogen regulatory protein P-II 2 compare
MPMX20_00192 -1.4 -5.2 Dipeptide transport system permease protein DppC conserved
MPMX20_03355 -1.3 -4.1 Phosphoribosylglycinamide formyltransferase compare
MPMX20_01349 -1.3 -3.1 Citrate synthase compare
MPMX20_04504 -1.3 -2.9 hypothetical protein compare
MPMX20_02830 -1.3 -4.1 IS3 family transposase IS1222 compare
MPMX20_04502 -1.3 -6.5 Acetolactate synthase isozyme 2 large subunit compare
MPMX20_00213 -1.3 -2.2 Thiazole synthase compare
MPMX20_04483 -1.3 -2.6 Lipid III flippase compare
MPMX20_03267 -1.3 -2.0 Phosphohistidine phosphatase SixA compare
MPMX20_03043 -1.3 -3.6 Low molecular weight protein-tyrosine-phosphatase Wzb compare
MPMX20_02957 -1.3 -8.3 DNA-cytosine methyltransferase compare
MPMX20_04668 -1.3 -1.6 hypothetical protein compare
MPMX20_03039 -1.3 -5.2 hypothetical protein compare
MPMX20_02645 -1.3 -4.9 Ribosome-binding ATPase YchF compare
MPMX20_00611 -1.3 -2.9 hypothetical protein compare
MPMX20_04427 -1.3 -0.8 5S ribosomal RNA compare
MPMX20_04692 -1.2 -1.3 hypothetical protein compare
MPMX20_04066 -1.2 -1.4 ATP-dependent RNA helicase DeaD compare
MPMX20_04465 -1.2 -3.9 Tyrosine recombinase XerC compare
MPMX20_04009 -1.2 -2.7 hypothetical protein compare
MPMX20_02775 -1.2 -4.3 Carboxy-S-adenosyl-L-methionine synthase compare
MPMX20_04505 -1.2 -4.7 HTH-type transcriptional regulator HdfR compare
MPMX20_03038 -1.2 -8.2 hypothetical protein compare
MPMX20_01029 -1.2 -3.1 ATP-dependent Clp protease ATP-binding subunit ClpX compare
MPMX20_04501 -1.2 -3.1 Acetolactate synthase isozyme 2 small subunit compare
MPMX20_00197 -1.2 -1.5 tRNA-Tyr compare
MPMX20_02769 -1.2 -2.1 putative transcriptional regulatory protein YebC compare
MPMX20_03036 -1.2 -3.4 Putative acetyltransferase compare
MPMX20_02102 -1.2 -2.1 hypothetical protein compare
MPMX20_03756 -1.2 -2.4 FAD assembly factor SdhE compare
MPMX20_01902 -1.2 -4.2 Vitamin B12 import system permease protein BtuC compare


Specific Phenotypes

For 15 genes in this experiment

For nitrogen source Gly-Glu in Enterobacter sp. TBS_079

For nitrogen source Gly-Glu across organisms