Experiment set10S401 for Enterobacter sp. TBS_079

Compare to:

L-Methionine nitrogen source

200 most important genes:

  gene name fitness t score description  
MPMX20_00544 -4.8 -8.6 Aspartate carbamoyltransferase catalytic subunit compare
MPMX20_04597 -4.6 -9.3 DNA-binding transcriptional regulator NtrC compare
MPMX20_03004 -4.6 -12.2 Histidine biosynthesis bifunctional protein HisB compare
MPMX20_03005 -4.5 -8.6 Imidazole glycerol phosphate synthase subunit HisH compare
MPMX20_00831 -4.5 -8.0 RNA polymerase-binding transcription factor DksA compare
MPMX20_03771 -4.5 -11.1 D-3-phosphoglycerate dehydrogenase compare
MPMX20_03003 -4.4 -12.4 Histidinol-phosphate aminotransferase compare
MPMX20_00556 -4.3 -11.1 Ornithine carbamoyltransferase subunit F compare
MPMX20_00693 -4.3 -8.9 Phosphoserine phosphatase compare
MPMX20_03705 -4.3 -10.8 Diaminopimelate decarboxylase compare
MPMX20_04520 -4.2 -11.6 Argininosuccinate lyase compare
MPMX20_03006 -4.2 -10.0 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX20_03653 -4.0 -13.4 GTP pyrophosphokinase compare
MPMX20_03338 -3.9 -7.1 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_01349 -3.9 -7.5 Citrate synthase compare
MPMX20_01098 -3.9 -5.9 N5-carboxyaminoimidazole ribonucleotide mutase compare
MPMX20_04077 -3.8 -12.2 Argininosuccinate synthase compare
MPMX20_04066 -3.8 -3.0 ATP-dependent RNA helicase DeaD compare
MPMX20_01014 -3.7 -13.3 tRNA sulfurtransferase compare
MPMX20_03007 -3.7 -7.9 Imidazole glycerol phosphate synthase subunit HisF compare
MPMX20_02494 -3.6 -9.7 Orotidine 5'-phosphate decarboxylase compare
MPMX20_04319 -3.6 -10.8 HTH-type transcriptional regulator GntR compare
MPMX20_04596 -3.6 -11.6 Sensory histidine kinase/phosphatase NtrB compare
MPMX20_00928 -3.6 -11.6 Gamma-glutamyl phosphate reductase compare
MPMX20_01320 -3.6 -13.0 Asparagine synthetase B [glutamine-hydrolyzing] compare
MPMX20_01566 -3.6 -9.9 Phosphoserine aminotransferase compare
MPMX20_00712 -3.6 -12.1 Threonine synthase compare
MPMX20_01028 -3.5 -2.4 ATP-dependent Clp protease proteolytic subunit compare
MPMX20_00711 -3.5 -11.2 Homoserine kinase compare
MPMX20_03002 -3.5 -11.4 Histidinol dehydrogenase compare
MPMX20_02696 -3.4 -7.3 Murein tetrapeptide carboxypeptidase compare
MPMX20_01596 -3.4 -22.0 Dihydroorotate dehydrogenase (quinone) compare
MPMX20_02513 -3.4 -12.3 Tryptophan synthase beta chain compare
MPMX20_04275 -3.3 -2.3 Ribulose-phosphate 3-epimerase compare
MPMX20_00739 -3.3 -6.7 Carbamoyl-phosphate synthase small chain compare
MPMX20_03681 -3.3 -11.2 Amino-acid acetyltransferase compare
MPMX20_00768 -3.2 -10.4 3-isopropylmalate dehydrogenase compare
MPMX20_00740 -3.2 -11.2 Carbamoyl-phosphate synthase large chain compare
MPMX20_00927 -3.2 -11.0 Glutamate 5-kinase compare
MPMX20_04521 -3.1 -8.4 Acetylglutamate kinase compare
MPMX20_01366 -3.1 -5.2 Tol-Pal system protein TolQ compare
MPMX20_01741 -3.1 -7.6 Dihydroorotase compare
MPMX20_00093 -3.1 -9.5 Orotate phosphoribosyltransferase compare
MPMX20_04595 -3.1 -2.1 Glutamine synthetase compare
MPMX20_04523 -3.0 -7.5 Acetylornithine deacetylase compare
MPMX20_00766 -3.0 -6.3 3-isopropylmalate dehydratase small subunit 1 compare
MPMX20_00976 -3.0 -5.4 Pyrroline-5-carboxylate reductase compare
MPMX20_01984 -2.9 -3.3 Ribonuclease T compare
MPMX20_03264 -2.9 -4.7 Chorismate synthase compare
MPMX20_03683 -2.9 -2.0 RecBCD enzyme subunit RecB compare
MPMX20_00226 -2.8 -8.6 Bifunctional purine biosynthesis protein PurH compare
MPMX20_02512 -2.8 -10.2 Tryptophan biosynthesis protein TrpCF compare
MPMX20_01030 -2.8 -8.6 Lon protease compare
MPMX20_04344 -2.7 -1.9 hypothetical protein compare
MPMX20_01367 -2.7 -6.3 Tol-Pal system protein TolR compare
MPMX20_04570 -2.7 -8.5 HTH-type transcriptional regulator SutR compare
MPMX20_03468 -2.7 -6.7 T-protein compare
MPMX20_03001 -2.6 -9.6 ATP phosphoribosyltransferase compare
MPMX20_02514 -2.6 -4.0 Tryptophan synthase alpha chain compare
MPMX20_01549 -2.6 -5.3 ATP-binding/permease protein CydD compare
MPMX20_02732 -2.6 -4.4 PhoP/PhoQ regulator MgrB compare
MPMX20_02766 -2.6 -5.0 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_00767 -2.5 -9.0 3-isopropylmalate dehydratase large subunit 1 compare
MPMX20_04522 -2.5 -7.9 N-acetyl-gamma-glutamyl-phosphate reductase compare
MPMX20_01548 -2.5 -5.1 putative ABC transporter ATP-binding/permease protein compare
MPMX20_03247 -2.5 -5.1 Amidophosphoribosyltransferase compare
MPMX20_02511 -2.5 -10.5 Bifunctional protein TrpGD compare
MPMX20_04276 -2.4 -6.0 DNA adenine methylase compare
MPMX20_00480 -2.4 -3.5 50S ribosomal protein L9 compare
MPMX20_04524 -2.4 -11.8 Phosphoenolpyruvate carboxylase compare
MPMX20_04194 -2.4 -2.1 Peptide deformylase compare
MPMX20_03685 -2.3 -4.7 RecBCD enzyme subunit RecC compare
MPMX20_04499 -2.3 -10.3 Dihydroxy-acid dehydratase compare
MPMX20_03382 -2.3 -3.1 Inosine-5'-monophosphate dehydrogenase compare
MPMX20_00710 -2.3 -10.8 Bifunctional aspartokinase/homoserine dehydrogenase 1 compare
MPMX20_04498 -2.3 -6.1 L-threonine dehydratase biosynthetic IlvA compare
MPMX20_03318 -2.3 -5.7 Dye-decolorizing peroxidase YfeX compare
MPMX20_01567 -2.3 -5.6 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_01370 -2.2 -4.4 Peptidoglycan-associated lipoprotein compare
MPMX20_03090 -2.2 -1.8 Methionine--tRNA ligase compare
MPMX20_01368 -2.2 -3.1 hypothetical protein compare
MPMX20_02710 -2.2 -7.1 Ribonuclease D compare
MPMX20_03426 -2.2 -10.7 Phosphoribosylformylglycinamidine synthase compare
MPMX20_01570 -2.1 -1.8 Integration host factor subunit beta compare
MPMX20_02510 -2.1 -8.7 Anthranilate synthase component 1 compare
MPMX20_00225 -2.1 -7.8 Phosphoribosylamine--glycine ligase compare
MPMX20_00764 -2.1 -1.6 hypothetical protein compare
MPMX20_01369 -2.0 -6.1 Tol-Pal system protein TolB compare
MPMX20_04119 -2.0 -2.3 DNA polymerase III subunit chi compare
MPMX20_03354 -2.0 -5.3 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX20_04496 -1.9 -6.3 Ketol-acid reductoisomerase (NADP(+)) compare
MPMX20_04126 -1.9 -12.1 Glutamate synthase [NADPH] large chain compare
MPMX20_02768 -1.9 -2.7 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_00031 -1.9 -8.7 Acetolactate synthase isozyme 1 large subunit compare
MPMX20_00453 -1.9 -2.2 RNA-binding protein Hfq compare
MPMX20_02591 -1.9 -4.4 DNA-binding protein H-NS compare
MPMX20_01354 -1.8 -2.5 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_02755 -1.8 -4.0 KHG/KDPG aldolase compare
MPMX20_02826 -1.8 -2.4 Cold shock-like protein CspB compare
MPMX20_03008 -1.8 -5.3 Histidine biosynthesis bifunctional protein HisIE compare
MPMX20_04111 -1.8 -4.0 RNase adapter protein RapZ compare
MPMX20_04127 -1.8 -8.5 Glutamate synthase [NADPH] small chain compare
MPMX20_00745 -1.8 -4.0 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical compare
MPMX20_03356 -1.7 -7.8 Polyphosphate kinase compare
MPMX20_01446 -1.7 -2.0 Small protein MntS compare
MPMX20_02596 -1.7 -8.5 Formyltetrahydrofolate deformylase compare
MPMX20_04465 -1.7 -3.8 Tyrosine recombinase XerC compare
MPMX20_00086 -1.7 -1.8 Bifunctional (p)ppGpp synthase/hydrolase SpoT compare
MPMX20_04162 -1.7 -3.8 3-dehydroquinate dehydratase compare
MPMX20_01382 -1.7 -2.7 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
MPMX20_03309 -1.7 -3.1 Phosphocarrier protein HPr compare
MPMX20_00570 -1.7 -10.4 putative BsuMI modification methylase subunit YdiO compare
MPMX20_04557 -1.7 -6.2 Sensor histidine kinase CpxA compare
MPMX20_03043 -1.7 -3.7 Low molecular weight protein-tyrosine-phosphatase Wzb compare
MPMX20_00032 -1.6 -2.3 Acetolactate synthase isozyme 1 small subunit compare
MPMX20_00899 -1.6 -2.1 Ribonuclease HI compare
MPMX20_04189 -1.6 -5.3 Shikimate dehydrogenase (NADP(+)) compare
MPMX20_01901 -1.6 -2.2 Integration host factor subunit alpha compare
MPMX20_01784 -1.5 -3.5 Purine nucleoside phosphoramidase compare
MPMX20_01768 -1.5 -3.0 Large ribosomal RNA subunit accumulation protein YceD compare
MPMX20_04504 -1.5 -2.6 hypothetical protein compare
MPMX20_04624 -1.5 -5.5 Regulatory protein AsnC compare
MPMX20_03580 -1.5 -4.3 Protein RecA compare
MPMX20_04133 -1.5 -3.2 Stringent starvation protein A compare
MPMX20_04278 -1.5 -3.9 3-dehydroquinate synthase compare
MPMX20_00769 -1.5 -7.6 2-isopropylmalate synthase compare
MPMX20_01552 -1.5 -4.1 hypothetical protein compare
MPMX20_00395 -1.4 -2.7 hypothetical protein compare
MPMX20_01951 -1.4 -4.2 Pyruvate kinase I compare
MPMX20_00720 -1.4 -1.4 Chaperone protein DnaK compare
MPMX20_01989 -1.4 -1.6 hypothetical protein compare
MPMX20_04559 -1.4 -1.9 Superoxide dismutase [Mn] compare
MPMX20_03310 -1.4 -3.5 Phosphoenolpyruvate-protein phosphotransferase compare
MPMX20_04393 -1.4 -4.2 Low-affinity inorganic phosphate transporter 1 compare
MPMX20_03706 -1.4 -4.7 Octopine catabolism/uptake operon regulatory protein OccR compare
MPMX20_00272 -1.3 -7.8 Aromatic-amino-acid aminotransferase compare
MPMX20_02549 -1.3 -2.0 hypothetical protein compare
MPMX20_04497 -1.3 -3.8 HTH-type transcriptional regulator GltC compare
MPMX20_04243 -1.3 -1.1 hypothetical protein compare
MPMX20_04466 -1.3 -3.6 hypothetical protein compare
MPMX20_03753 -1.3 -4.1 Tyrosine recombinase XerD compare
MPMX20_03629 -1.3 -2.4 Protein-L-isoaspartate O-methyltransferase compare
MPMX20_00542 -1.3 -4.2 2-iminobutanoate/2-iminopropanoate deaminase compare
MPMX20_01781 -1.2 -4.5 PTS system glucose-specific EIICB component compare
MPMX20_04505 -1.2 -4.7 HTH-type transcriptional regulator HdfR compare
MPMX20_02295 -1.2 -1.2 hypothetical protein compare
MPMX20_00666 -1.2 -1.8 tRNA-Leu compare
MPMX20_00785 -1.2 -1.9 D-alanine--D-alanine ligase B compare
MPMX20_00087 -1.2 -2.1 DNA-directed RNA polymerase subunit omega compare
MPMX20_04558 -1.2 -2.0 Protein YiiM compare
MPMX20_03285 -1.2 -1.0 hypothetical protein compare
MPMX20_04500 -1.1 -4.1 Branched-chain-amino-acid aminotransferase compare
MPMX20_02411 -1.1 -2.7 hypothetical protein compare
MPMX20_01919 -1.1 -2.2 putative protein YdiE compare
MPMX20_03227 -1.1 -3.4 Phosphate acetyltransferase compare
MPMX20_01097 -1.1 -2.8 N5-carboxyaminoimidazole ribonucleotide synthase compare
MPMX20_04141 -1.1 -3.0 Arginine repressor compare
MPMX20_03466 -1.1 -5.2 Bifunctional chorismate mutase/prephenate dehydratase compare
MPMX20_02707 -1.1 -1.8 Septum site-determining protein MinC compare
MPMX20_03253 -1.1 -3.6 tRNA pseudouridine synthase A compare
MPMX20_04440 -1.1 -1.2 Transcription antitermination protein RfaH compare
MPMX20_02116 -1.1 -1.3 hypothetical protein compare
MPMX20_02471 -1.1 -3.4 Phage shock protein B compare
MPMX20_02593 -1.1 -7.4 Regulator of RpoS compare
MPMX20_03154 -1.1 -3.9 Inner membrane protein YejM compare
MPMX20_03515 -1.1 -2.5 hypothetical protein compare
MPMX20_00620 -1.0 -4.6 Inner membrane protein YibH compare
MPMX20_01605 -1.0 -3.3 Lon protease compare
MPMX20_00807 -1.0 -2.4 Pyruvate dehydrogenase E1 component compare
MPMX20_00123 -1.0 -1.5 Glutaredoxin 3 compare
MPMX20_02997 -1.0 -4.1 Exodeoxyribonuclease I compare
MPMX20_02737 -1.0 -6.2 Tail-specific protease compare
MPMX20_01484 -1.0 -2.9 HTH-type transcriptional regulator RcdA compare
MPMX20_04687 -1.0 -4.6 hypothetical protein compare
MPMX20_00084 -1.0 -4.3 ATP-dependent DNA helicase RecG compare
MPMX20_01043 -1.0 -5.0 Ammonia channel compare
MPMX20_01607 -1.0 -1.8 Outer membrane protein A compare
MPMX20_00806 -1.0 -2.3 Pyruvate dehydrogenase complex repressor compare
MPMX20_03000 -1.0 -2.7 Protein YeeZ compare
MPMX20_03864 -1.0 -3.4 Sensor protein QseC compare
MPMX20_04495 -1.0 -2.8 Peptidyl-prolyl cis-trans isomerase C compare
MPMX20_03463 -1.0 -3.9 Ribosomal large subunit pseudouridine synthase D compare
MPMX20_01029 -1.0 -2.3 ATP-dependent Clp protease ATP-binding subunit ClpX compare
MPMX20_03929 -1.0 -2.5 hypothetical protein compare
MPMX20_02275 -0.9 -2.3 Acetyltransferase compare
MPMX20_03047 -0.9 -3.1 dCTP deaminase compare
MPMX20_02574 -0.9 -2.0 putative intracellular septation protein A compare
MPMX20_03304 -0.9 -2.3 hypothetical protein compare
MPMX20_00340 -0.9 -1.1 hypothetical protein compare
MPMX20_00213 -0.9 -1.4 Thiazole synthase compare
MPMX20_04601 -0.9 -1.1 DNA polymerase I compare
MPMX20_00621 -0.9 -4.2 hypothetical protein compare
MPMX20_00136 -0.9 -1.0 hypothetical protein compare
MPMX20_02176 -0.9 -2.7 hypothetical protein compare
MPMX20_03932 -0.9 -2.7 hypothetical protein compare
MPMX20_02767 -0.9 -1.9 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_04532 -0.9 -1.4 Met repressor compare
MPMX20_04301 -0.9 -1.6 Fe/S biogenesis protein NfuA compare
MPMX20_03648 -0.9 -4.6 putative HTH-type transcriptional regulator YbbH compare
MPMX20_01256 -0.9 -1.2 hypothetical protein compare


Specific Phenotypes

For 2 genes in this experiment

For nitrogen source L-Methionine in Enterobacter sp. TBS_079

For nitrogen source L-Methionine across organisms