Experiment set10S396 for Enterobacter sp. TBS_079

Compare to:

L-Proline nitrogen source

200 most important genes:

  gene name fitness t score description  
MPMX20_03771 -6.5 -7.7 D-3-phosphoglycerate dehydrogenase compare
MPMX20_00768 -6.3 -6.2 3-isopropylmalate dehydrogenase compare
MPMX20_03354 -6.3 -8.7 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX20_01566 -6.3 -11.4 Phosphoserine aminotransferase compare
MPMX20_03002 -6.3 -7.5 Histidinol dehydrogenase compare
MPMX20_03008 -6.1 -6.0 Histidine biosynthesis bifunctional protein HisIE compare
MPMX20_01320 -6.1 -6.0 Asparagine synthetase B [glutamine-hydrolyzing] compare
MPMX20_02514 -6.1 -4.2 Tryptophan synthase alpha chain compare
MPMX20_00710 -6.0 -8.3 Bifunctional aspartokinase/homoserine dehydrogenase 1 compare
MPMX20_02510 -6.0 -10.9 Anthranilate synthase component 1 compare
MPMX20_03006 -5.9 -5.8 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX20_00711 -5.9 -5.8 Homoserine kinase compare
MPMX20_00767 -5.9 -5.8 3-isopropylmalate dehydratase large subunit 1 compare
MPMX20_02511 -5.9 -7.1 Bifunctional protein TrpGD compare
MPMX20_02513 -5.8 -7.0 Tryptophan synthase beta chain compare
MPMX20_03001 -5.8 -8.0 ATP phosphoribosyltransferase compare
MPMX20_03653 -5.8 -8.8 GTP pyrophosphokinase compare
MPMX20_00556 -5.8 -7.9 Ornithine carbamoyltransferase subunit F compare
MPMX20_02512 -5.8 -6.9 Tryptophan biosynthesis protein TrpCF compare
MPMX20_00693 -5.7 -8.8 Phosphoserine phosphatase compare
MPMX20_00831 -5.7 -5.6 RNA polymerase-binding transcription factor DksA compare
MPMX20_03007 -5.7 -5.6 Imidazole glycerol phosphate synthase subunit HisF compare
MPMX20_04523 -5.7 -3.9 Acetylornithine deacetylase compare
MPMX20_03705 -5.7 -3.9 Diaminopimelate decarboxylase compare
MPMX20_00766 -5.6 -6.7 3-isopropylmalate dehydratase small subunit 1 compare
MPMX20_04499 -5.6 -9.4 Dihydroxy-acid dehydratase compare
MPMX20_04077 -5.5 -7.6 Argininosuccinate synthase compare
MPMX20_03003 -5.5 -8.5 Histidinol-phosphate aminotransferase compare
MPMX20_04498 -5.5 -6.6 L-threonine dehydratase biosynthetic IlvA compare
MPMX20_04597 -5.5 -3.8 DNA-binding transcriptional regulator NtrC compare
MPMX20_00712 -5.3 -8.9 Threonine synthase compare
MPMX20_01098 -5.3 -6.3 N5-carboxyaminoimidazole ribonucleotide mutase compare
MPMX20_00225 -5.2 -8.7 Phosphoribosylamine--glycine ligase compare
MPMX20_03468 -5.2 -6.2 T-protein compare
MPMX20_00544 -5.2 -7.2 Aspartate carbamoyltransferase catalytic subunit compare
MPMX20_03466 -5.2 -10.0 Bifunctional chorismate mutase/prephenate dehydratase compare
MPMX20_03005 -5.2 -6.2 Imidazole glycerol phosphate synthase subunit HisH compare
MPMX20_03426 -5.2 -13.4 Phosphoribosylformylglycinamidine synthase compare
MPMX20_00740 -5.1 -6.1 Carbamoyl-phosphate synthase large chain compare
MPMX20_03004 -5.1 -9.8 Histidine biosynthesis bifunctional protein HisB compare
MPMX20_04520 -5.1 -6.1 Argininosuccinate lyase compare
MPMX20_04531 -5.0 -8.4 Cystathionine gamma-synthase compare
MPMX20_03264 -5.0 -6.0 Chorismate synthase compare
MPMX20_02494 -5.0 -5.9 Orotidine 5'-phosphate decarboxylase compare
MPMX20_00226 -4.9 -8.9 Bifunctional purine biosynthesis protein PurH compare
MPMX20_01097 -4.9 -6.7 N5-carboxyaminoimidazole ribonucleotide synthase compare
MPMX20_01567 -4.9 -3.4 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_03338 -4.9 -6.7 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_01370 -4.7 -5.1 Peptidoglycan-associated lipoprotein compare
MPMX20_04522 -4.7 -7.2 N-acetyl-gamma-glutamyl-phosphate reductase compare
MPMX20_01596 -4.7 -15.7 Dihydroorotate dehydrogenase (quinone) compare
MPMX20_00739 -4.6 -3.2 Carbamoyl-phosphate synthase small chain compare
MPMX20_04162 -4.6 -3.2 3-dehydroquinate dehydratase compare
MPMX20_04319 -4.6 -9.3 HTH-type transcriptional regulator GntR compare
MPMX20_04189 -4.6 -3.2 Shikimate dehydrogenase (NADP(+)) compare
MPMX20_00230 -4.5 -8.1 Homoserine O-succinyltransferase compare
MPMX20_03852 -4.5 -13.5 Cystathionine beta-lyase MetC compare
MPMX20_04496 -4.4 -5.3 Ketol-acid reductoisomerase (NADP(+)) compare
MPMX20_03681 -4.4 -14.7 Amino-acid acetyltransferase compare
MPMX20_01354 -4.3 -4.2 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_04596 -4.3 -9.7 Sensory histidine kinase/phosphatase NtrB compare
MPMX20_03247 -4.3 -9.1 Amidophosphoribosyltransferase compare
MPMX20_01030 -4.3 -8.7 Lon protease compare
MPMX20_01369 -4.3 -11.4 Tol-Pal system protein TolB compare
MPMX20_01367 -4.2 -7.6 Tol-Pal system protein TolR compare
MPMX20_01741 -4.1 -5.7 Dihydroorotase compare
MPMX20_04278 -4.1 -2.9 3-dehydroquinate synthase compare
MPMX20_04521 -4.1 -6.8 Acetylglutamate kinase compare
MPMX20_00093 -4.1 -6.8 Orotate phosphoribosyltransferase compare
MPMX20_03356 -4.0 -15.3 Polyphosphate kinase compare
MPMX20_01368 -3.9 -4.5 hypothetical protein compare
MPMX20_03706 -3.9 -8.8 Octopine catabolism/uptake operon regulatory protein OccR compare
MPMX20_04497 -3.8 -9.6 HTH-type transcriptional regulator GltC compare
MPMX20_01702 -3.8 -20.6 Bifunctional protein PutA conserved
MPMX20_03090 -3.7 -1.9 Methionine--tRNA ligase compare
MPMX20_02768 -3.7 -3.6 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_01548 -3.7 -6.1 putative ABC transporter ATP-binding/permease protein compare
MPMX20_03318 -3.6 -7.0 Dye-decolorizing peroxidase YfeX compare
MPMX20_01350 -3.5 -5.5 Succinate dehydrogenase cytochrome b556 subunit compare
MPMX20_04624 -3.4 -9.2 Regulatory protein AsnC compare
MPMX20_01286 -3.4 -2.5 Sec-independent protein translocase protein TatE compare
MPMX20_00769 -3.4 -9.8 2-isopropylmalate synthase compare
MPMX20_04275 -3.3 -2.3 Ribulose-phosphate 3-epimerase compare
MPMX20_04119 -3.3 -2.3 DNA polymerase III subunit chi compare
MPMX20_01366 -3.1 -5.2 Tol-Pal system protein TolQ compare
MPMX20_01355 -3.1 -1.6 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_03382 -3.1 -2.1 Inosine-5'-monophosphate dehydrogenase compare
MPMX20_01382 -3.0 -2.1 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
MPMX20_01549 -3.0 -4.5 ATP-binding/permease protein CydD compare
MPMX20_04595 -3.0 -2.1 Glutamine synthetase compare
MPMX20_01361 -3.0 -8.6 Cytochrome bd-I ubiquinol oxidase subunit 1 compare
MPMX20_00086 -2.9 -3.8 Bifunctional (p)ppGpp synthase/hydrolase SpoT compare
MPMX20_03685 -2.9 -2.8 RecBCD enzyme subunit RecC compare
MPMX20_00721 -2.8 -3.8 Chaperone protein DnaJ compare
MPMX20_01362 -2.7 -6.2 Cytochrome bd-I ubiquinol oxidase subunit 2 compare
MPMX20_03683 -2.7 -3.2 RecBCD enzyme subunit RecB compare
MPMX20_01352 -2.7 -9.3 Succinate dehydrogenase flavoprotein subunit compare
MPMX20_04443 -2.6 -2.6 Sec-independent protein translocase protein TatB compare
MPMX20_01765 -2.6 -5.4 Ribonuclease E compare
MPMX20_03043 -2.6 -4.3 Low molecular weight protein-tyrosine-phosphatase Wzb compare
MPMX20_02766 -2.5 -4.6 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_04306 -2.5 -5.9 Glycerol-3-phosphate regulon repressor compare
MPMX20_04668 -2.5 -3.3 hypothetical protein compare
MPMX20_04601 -2.5 -2.9 DNA polymerase I compare
MPMX20_04110 -2.5 -5.9 Nitrogen regulatory protein compare
MPMX20_01353 -2.5 -6.7 Succinate dehydrogenase iron-sulfur subunit compare
MPMX20_00106 -2.5 -6.3 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_04626 -2.4 -4.6 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_00388 -2.4 -1.2 hypothetical protein compare
MPMX20_03010 -2.4 -6.3 UDP-glucose 4-epimerase compare
MPMX20_00806 -2.4 -4.9 Pyruvate dehydrogenase complex repressor compare
MPMX20_04469 -2.3 -4.6 Adenylate cyclase compare
MPMX20_03028 -2.3 -12.2 Lipopolysaccharide biosynthesis protein WzxC compare
MPMX20_04111 -2.3 -4.2 RNase adapter protein RapZ compare
MPMX20_03469 -2.2 -6.9 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive compare
MPMX20_02767 -2.2 -3.9 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_03038 -2.2 -14.3 hypothetical protein compare
MPMX20_01551 -2.2 -5.7 Leucine-responsive regulatory protein compare
MPMX20_03310 -2.2 -5.5 Phosphoenolpyruvate-protein phosphotransferase compare
MPMX20_03036 -2.1 -5.7 Putative acetyltransferase compare
MPMX20_00899 -2.1 -2.0 Ribonuclease HI compare
MPMX20_03042 -2.1 -11.6 Tyrosine-protein kinase wzc compare
MPMX20_02770 -2.1 -5.7 Dihydroneopterin triphosphate diphosphatase compare
MPMX20_00514 -2.1 -8.0 Fructose-1,6-bisphosphatase class 1 compare
MPMX20_03154 -2.1 -9.1 Inner membrane protein YejM compare
MPMX20_04552 -2.1 -4.4 ATP-dependent 6-phosphofructokinase isozyme 1 compare
MPMX20_04197 -2.1 -5.7 Trk system potassium uptake protein TrkA compare
MPMX20_01028 -2.0 -3.3 ATP-dependent Clp protease proteolytic subunit compare
MPMX20_04140 -2.0 -8.2 Malate dehydrogenase compare
MPMX20_01156 -2.0 -3.5 hypothetical protein compare
MPMX20_00570 -2.0 -12.1 putative BsuMI modification methylase subunit YdiO compare
MPMX20_03044 -2.0 -15.4 hypothetical protein compare
MPMX20_03390 -2.0 -7.0 Outer membrane protein assembly factor BamB compare
MPMX20_04442 -2.0 -4.4 Sec-independent protein translocase protein TatC compare
MPMX20_01101 -2.0 -3.0 Peptidyl-prolyl cis-trans isomerase B compare
MPMX20_04639 -2.0 -1.9 Phosphate-binding protein PstS compare
MPMX20_04642 -2.0 -2.6 Phosphate import ATP-binding protein PstB compare
MPMX20_03218 -2.0 -3.8 NAD(P)H-quinone oxidoreductase subunit 3 compare
MPMX20_02635 -2.0 -2.8 Release factor glutamine methyltransferase compare
MPMX20_00812 -1.9 -6.7 Aconitate hydratase B compare
MPMX20_01552 -1.9 -4.7 hypothetical protein compare
MPMX20_00419 -1.9 -8.5 Aspartate ammonia-lyase compare
MPMX20_02116 -1.9 -2.7 hypothetical protein compare
MPMX20_00976 -1.9 -4.9 Pyrroline-5-carboxylate reductase compare
MPMX20_04465 -1.9 -5.2 Tyrosine recombinase XerC compare
MPMX20_03753 -1.9 -5.3 Tyrosine recombinase XerD compare
MPMX20_00773 -1.8 -9.8 Catabolite repressor/activator compare
MPMX20_03629 -1.8 -4.6 Protein-L-isoaspartate O-methyltransferase compare
MPMX20_03207 -1.8 -5.9 NADH-quinone oxidoreductase subunit M compare
MPMX20_04483 -1.8 -3.7 Lipid III flippase compare
MPMX20_03641 -1.8 -6.3 Phosphoadenosine phosphosulfate reductase compare
MPMX20_02593 -1.8 -11.1 Regulator of RpoS compare
MPMX20_03211 -1.8 -3.1 NADH-quinone oxidoreductase subunit I compare
MPMX20_04466 -1.7 -4.3 hypothetical protein compare
MPMX20_04272 -1.7 -1.4 hypothetical protein compare
MPMX20_03214 -1.7 -7.2 NADH-quinone oxidoreductase subunit F compare
MPMX20_04127 -1.7 -9.0 Glutamate synthase [NADPH] small chain compare
MPMX20_03377 -1.7 -2.7 hypothetical protein compare
MPMX20_00102 -1.7 -3.5 hypothetical protein compare
MPMX20_00038 -1.7 -2.3 hypothetical protein compare
MPMX20_01357 -1.6 -4.8 Succinate--CoA ligase [ADP-forming] subunit alpha compare
MPMX20_01029 -1.6 -4.0 ATP-dependent Clp protease ATP-binding subunit ClpX compare
MPMX20_01349 -1.6 -4.9 Citrate synthase compare
MPMX20_01042 -1.6 -3.7 Nitrogen regulatory protein P-II 2 compare
MPMX20_03309 -1.6 -2.9 Phosphocarrier protein HPr compare
MPMX20_00031 -1.6 -7.8 Acetolactate synthase isozyme 1 large subunit compare
MPMX20_03037 -1.6 -5.2 hypothetical protein compare
MPMX20_04444 -1.6 -1.0 Sec-independent protein translocase protein TatA compare
MPMX20_03206 -1.6 -7.5 NADH-quinone oxidoreductase subunit N compare
MPMX20_00032 -1.6 -3.5 Acetolactate synthase isozyme 1 small subunit compare
MPMX20_02755 -1.6 -4.8 KHG/KDPG aldolase compare
MPMX20_01043 -1.5 -6.9 Ammonia channel compare
MPMX20_03022 -1.5 -4.3 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_03095 -1.5 -1.5 hypothetical protein compare
MPMX20_04557 -1.5 -5.5 Sensor histidine kinase CpxA compare
MPMX20_03580 -1.5 -4.5 Protein RecA compare
MPMX20_02672 -1.5 -11.0 hypothetical protein compare
MPMX20_04279 -1.4 -2.5 Shikimate kinase 1 compare
MPMX20_03216 -1.4 -7.2 NADH-quinone oxidoreductase subunit C/D compare
MPMX20_02957 -1.4 -10.1 DNA-cytosine methyltransferase compare
MPMX20_01351 -1.4 -3.1 Succinate dehydrogenase hydrophobic membrane anchor subunit compare
MPMX20_04570 -1.4 -5.5 HTH-type transcriptional regulator SutR compare
MPMX20_00214 -1.4 -2.5 Sulfur carrier protein ThiS compare
MPMX20_03209 -1.4 -2.4 NADH-quinone oxidoreductase subunit K compare
MPMX20_00764 -1.4 -1.4 hypothetical protein compare
MPMX20_00630 -1.4 -3.7 hypothetical protein compare
MPMX20_00087 -1.4 -2.6 DNA-directed RNA polymerase subunit omega compare
MPMX20_02983 -1.4 -5.4 HTH-type transcriptional regulator ArgP conserved
MPMX20_03409 -1.4 -1.9 Iron-binding protein IscA compare
MPMX20_04126 -1.4 -8.9 Glutamate synthase [NADPH] large chain compare
MPMX20_04393 -1.3 -4.4 Low-affinity inorganic phosphate transporter 1 compare
MPMX20_03488 -1.3 -3.3 Persistence and stress-resistance antitoxin PasI compare
MPMX20_01570 -1.3 -1.5 Integration host factor subunit beta compare
MPMX20_00728 -1.3 -0.7 FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase compare
MPMX20_03217 -1.3 -3.4 NADH-quinone oxidoreductase subunit B compare
MPMX20_02708 -1.3 -5.7 Septum site-determining protein MinD compare
MPMX20_04641 -1.3 -2.2 Phosphate transport system permease protein PstA compare
MPMX20_03407 -1.3 -3.0 Chaperone protein HscA compare
MPMX20_03213 -1.3 -6.3 NADH-quinone oxidoreductase subunit G compare
MPMX20_02710 -1.3 -4.4 Ribonuclease D compare


Specific Phenotypes

For 8 genes in this experiment

For nitrogen source L-Proline in Enterobacter sp. TBS_079

For nitrogen source L-Proline across organisms