Experiment set10S253 for Phocaeicola vulgatus CL09T03C04

Compare to:

L-Serine nitrogen source; Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen

Genes with specific phenotypes:

  gene name fitness t score description  
HMPREF1058_RS10975 -4.1 -8.7 serine acetyltransferase compare
HMPREF1058_RS17595 -3.9 -5.4 Lrp/AsnC family transcriptional regulator compare
HMPREF1058_RS17635 -3.0 -6.5 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase compare
HMPREF1058_RS03795 -2.6 -6.6 MATE family efflux transporter compare
HMPREF1058_RS04690 -2.4 -10.5 cation:proton antiporter conserved
HMPREF1058_RS03790 -2.0 -5.7 OmpA family protein compare
HMPREF1058_RS14810 -1.7 -7.0 pyridoxal phosphate-dependent aminotransferase compare
HMPREF1058_RS00705 -1.7 -9.7 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase compare
HMPREF1058_RS06405 -1.3 -5.0 Na+/H+ antiporter NhaA conserved
HMPREF1058_RS06105 -1.3 -5.4 ABC transporter permease compare
HMPREF1058_RS02855 +1.2 5.5 DEAD/DEAH box helicase compare
HMPREF1058_RS11950 +1.3 5.0 HAD family phosphatase compare
HMPREF1058_RS17470 +1.3 6.0 transporter conserved
HMPREF1058_RS06800 +1.5 5.6 response regulator compare
HMPREF1058_RS06240 +1.5 5.8 YggS family pyridoxal phosphate-dependent enzyme compare
HMPREF1058_RS15535 +1.5 8.1 glycoside hydrolase family 25 protein compare
HMPREF1058_RS09160 +1.6 7.8 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase compare
HMPREF1058_RS01230 +1.6 9.1 redoxin domain-containing protein compare
HMPREF1058_RS02760 +1.7 5.5 peptidylprolyl isomerase conserved
HMPREF1058_RS06695 +1.8 6.3 glycosyltransferase compare
HMPREF1058_RS11565 +2.0 9.5 murein L,D-transpeptidase catalytic domain family protein compare
HMPREF1058_RS05410 +2.6 6.7 RNA polymerase sigma factor compare


Specific phenotypes for nitrogen source L-Serine across organisms