Experiment set10S184 for Methanococcus maripaludis S2

Compare to:

H2 N-free with 2.5mM Cytosine

200 most important genes:

  gene name fitness t score description  
MMP_RS06400 -6.7 -2.0 4Fe-4S binding protein compare
MMP_RS09020 -6.3 -1.9 hypothetical protein compare
MMP_RS06625 -6.2 -2.9 DNA primase compare
MMP_RS01610 -5.9 -4.0 hypothetical protein compare
MMP_RS01500 -5.9 -3.4 CBS domain-containing protein compare
MMP_RS01175 -5.5 -6.3 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS02675 -5.2 -4.4 hypothetical protein compare
MMP_RS07345 -5.1 -9.9 glycine synthesis protein GlyXL (from data) compare
MMP_RS02010 -5.0 -13.4 PHP domain-containing protein compare
MMP_RS02670 -5.0 -16.8 ATP-binding cassette domain-containing protein compare
MMP_RS04460 -5.0 -22.8 nitrogenase molybdenum-iron protein subunit beta compare
MMP_RS02680 -4.9 -8.5 ABC transporter permease compare
MMP_RS04445 -4.9 -9.9 P-II family nitrogen regulator compare
MMP_RS01225 -4.9 -5.3 DUF5379 domain-containing protein compare
MMP_RS04455 -4.8 -23.7 nitrogenase subunit alpha compare
MMP_RS07845 -4.8 -2.8 LL-diaminopimelate aminotransferase compare
MMP_RS04465 -4.8 -20.5 nitrogenase iron-molybdenum cofactor biosynthesis protein NifE compare
MMP_RS04470 -4.7 -20.5 nitrogenase compare
MMP_RS04440 -4.7 -11.5 nitrogenase iron protein compare
MMP_RS08715 -4.6 -2.9 formylmethanofuran dehydrogenase subunit B compare
MMP_RS03035 -4.5 -6.1 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS01385 -4.5 -0.8 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS04450 -4.4 -14.6 P-II family nitrogen regulator compare
MMP_RS02145 -4.4 -15.4 winged helix-turn-helix transcriptional regulator compare
MMP_RS01020 -4.3 -1.5 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS02685 -4.3 -13.6 molybdate ABC transporter substrate-binding protein compare
MMP_RS07355 -4.3 -1.0 transcription factor S compare
MMP_RS07635 -4.2 -10.5 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS08860 -4.1 -8.6 MinD/ParA family protein compare
MMP_RS01800 -4.0 -6.0 TIGR00303 family protein compare
MMP_RS02730 -4.0 -16.8 ModD protein compare
MMP_RS06630 -4.0 -1.0 UPF0058 family protein compare
MMP_RS01005 -3.9 -1.7 riboflavin synthase compare
MMP_RS08165 -3.9 -3.9 phosphoglycerate dehydrogenase compare
MMP_RS05930 -3.9 -3.3 3-isopropylmalate dehydratase large subunit compare
MMP_RS07185 -3.9 -14.6 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS05500 -3.8 -11.2 2-isopropylmalate synthase compare
MMP_RS03450 -3.8 -2.7 glycine synthesis protein GlyXS (from data) compare
MMP_RS06315 -3.8 -0.9 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS06855 -3.8 -12.5 hypothetical protein compare
MMP_RS03315 -3.8 -2.1 ferrous iron transport protein A compare
MMP_RS00040 -3.7 -5.8 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS06475 -3.7 -6.6 FAD-dependent oxidoreductase compare
MMP_RS00985 -3.6 -7.5 CDC48 family AAA ATPase compare
MMP_RS03205 -3.6 -2.2 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS00750 -3.6 -3.0 fumarate hydratase compare
MMP_RS00555 -3.6 -8.5 MFS transporter compare
MMP_RS07525 -3.6 -8.4 4Fe-4S binding protein compare
MMP_RS01830 -3.5 -2.3 tRNA-Val compare
MMP_RS03580 -3.5 -4.6 signal recognition particle-docking protein FtsY compare
MMP_RS00735 -3.5 -4.3 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS06120 -3.5 -3.4 UPF0147 family protein compare
MMP_RS02355 -3.5 -4.2 30S ribosomal protein S27ae compare
MMP_RS03025 -3.5 -8.6 molybdenum cofactor guanylyltransferase compare
MMP_RS07695 -3.4 -9.4 DUF3236 domain-containing protein compare
MMP_RS08500 -3.4 -6.5 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMP_RS06895 -3.4 -2.7 selenocysteine-specific translation elongation factor compare
MMP_RS04585 -3.4 -13.2 AIR synthase related protein compare
MMP_RS04780 -3.4 -3.9 ribonuclease P compare
MMP_RS03960 -3.4 -2.2 hypothetical protein compare
MMP_RS06020 -3.3 -6.4 archaeoflavoprotein AfpA compare
MMP_RS08650 -3.3 -5.2 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS02240 -3.3 -4.5 methanogenesis marker 7 protein compare
MMP_RS03700 -3.3 -11.2 sodium:proton antiporter compare
MMP_RS06840 -3.3 -1.2 DNA-directed RNA polymerase subunit N compare
MMP_RS00730 -3.3 -6.2 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS02245 -3.3 -4.1 hypothetical protein compare
MMP_RS07605 -3.3 -5.4 diadenylate cyclase compare
MMP_RS02345 -3.2 -5.4 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS06270 -3.2 -7.2 TIGR00300 family protein compare
MMP_RS04850 -3.2 -22.1 UPF0254 family protein compare
MMP_RS06295 -3.2 -8.5 methanogenesis marker 14 protein compare
MMP_RS01220 -3.2 -10.3 hypothetical protein compare
MMP_RS00915 -3.2 -7.0 DUF116 domain-containing protein compare
MMP_RS00725 -3.1 -10.1 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS08645 -3.1 -8.9 UPF0179 family protein compare
MMP_RS07365 -3.1 -15.0 2-phosphoglycerate kinase compare
MMP_RS04090 -3.1 -3.7 hypothetical protein compare
MMP_RS08435 -3.1 -3.3 Era-like GTP-binding protein compare
MMP_RS08720 -3.1 -2.2 4Fe-4S binding protein compare
MMP_RS01380 -3.1 -6.3 PHP domain-containing protein compare
MMP_RS00810 -3.1 -9.1 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS06725 -3.1 -12.3 hypothetical protein compare
MMP_RS07700 -3.1 -13.1 DUF1188 domain-containing protein compare
MMP_RS05265 -3.0 -3.1 2-isopropylmalate synthase compare
MMP_RS00305 -3.0 -2.0 phosphoribosyl-ATP diphosphatase compare
MMP_RS00310 -3.0 -12.3 CBS domain-containing protein compare
MMP_RS01455 -3.0 -5.1 nickel pincer cofactor biosynthesis protein LarC compare
MMP_RS04890 -3.0 -1.4 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS01725 -3.0 -5.4 class I SAM-dependent methyltransferase family protein compare
MMP_RS07380 -3.0 -3.0 transcription elongation factor Spt5 compare
MMP_RS01325 -3.0 -2.9 dihydroneopterin aldolase family protein compare
MMP_RS07390 -2.9 -3.5 cell division protein FtsZ compare
MMP_RS04685 -2.9 -3.6 DUF126 domain-containing protein compare
MMP_RS07445 -2.9 -6.6 helix-turn-helix domain-containing protein compare
MMP_RS03110 -2.9 -6.8 glycosyltransferase family 2 protein compare
MMP_RS07730 -2.9 -2.6 pyruvate synthase subunit beta compare
MMP_RS03090 -2.8 -9.4 cation:proton antiporter compare
MMP_RS02340 -2.8 -2.5 DNA-directed RNA polymerase subunit E'' compare
MMP_RS07200 -2.8 -8.3 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS07435 -2.8 -2.3 GMP synthase subunit A compare
MMP_RS03640 -2.8 -3.7 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS08440 -2.8 -4.0 cell division protein SepF compare
MMP_RS05430 -2.7 -5.7 TIGR00288 family NYN domain-containing protein compare
MMP_RS05250 -2.7 -2.4 NFYB/HAP3 family transcription factor subunit compare
MMP_RS00315 -2.7 -7.7 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS08785 -2.7 -1.6 RNA-protein complex protein Nop10 compare
MMP_RS00685 -2.6 -4.6 2-phospho-L-lactate guanylyltransferase compare
MMP_RS06285 -2.6 -3.3 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS07955 -2.6 -4.9 FumA C-terminus/TtdB family hydratase beta subunit compare
MMP_RS05925 -2.6 -5.9 small nuclear ribonucleoprotein compare
MMP_RS04790 -2.5 -11.4 4-hydroxy-tetrahydrodipicolinate reductase compare
MMP_RS08705 -2.5 -6.2 sulfopyruvate decarboxylase subunit beta compare
MMP_RS03435 -2.5 -2.3 ketol-acid reductoisomerase compare
MMP_RS03445 -2.5 -1.4 methanogenesis marker 17 protein compare
MMP_RS02900 -2.5 -0.7 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS04955 -2.5 -7.6 DNA topoisomerase I compare
MMP_RS01445 -2.5 -9.4 hypothetical protein compare
MMP_RS06230 -2.5 -3.2 helix-turn-helix domain-containing protein compare
MMP_RS08155 -2.5 -10.0 hypothetical protein compare
MMP_RS07710 -2.5 -7.4 cell division protein FtsZ compare
MMP_RS00895 -2.4 -4.7 hypothetical protein compare
MMP_RS03600 -2.4 -3.1 triose-phosphate isomerase compare
MMP_RS04215 -2.4 -8.2 nickel pincer cofactor biosynthesis protein LarB compare
MMP_RS01265 -2.3 -1.8 hypothetical protein compare
MMP_RS06885 -2.3 -3.7 50S ribosome-binding GTPase compare
MMP_RS00455 -2.3 -7.6 orotate phosphoribosyltransferase-like protein compare
MMP_RS07075 -2.3 -4.7 phosphomannomutase/phosphoglucomutase compare
MMP_RS06395 -2.3 -3.7 ThiF family adenylyltransferase compare
MMP_RS06925 -2.3 -3.0 ribonuclease VapC4 compare
MMP_RS03475 -2.3 -0.8 hypothetical protein compare
MMP_RS02195 -2.3 -4.8 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS01545 -2.3 -1.3 CBS domain-containing protein compare
MMP_RS08210 -2.2 -3.0 phosphatidylglycerophosphatase A compare
MMP_RS08820 -2.2 -5.9 hypothetical protein compare
MMP_RS07090 -2.2 -8.4 tRNA (adenine-N1)-methyltransferase compare
MMP_RS08195 -2.1 -9.5 hypothetical protein compare
MMP_RS02175 -2.1 -1.2 DUF1611 domain-containing protein compare
MMP_RS02190 -2.1 -2.6 sulfopyruvate decarboxylase subunit alpha compare
MMP_RS05540 -2.1 -2.3 hypothetical protein compare
MMP_RS06340 -2.1 -7.8 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS02165 -2.1 -9.0 tRNA-dihydrouridine synthase compare
MMP_RS08855 -2.0 -8.5 hypothetical protein compare
MMP_RS04710 -2.0 -2.3 hypothetical protein compare
MMP_RS00300 -2.0 -0.8 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS08570 -2.0 -9.5 coenzyme F420-0:L-glutamate ligase compare
MMP_RS06730 -2.0 -1.6 phosphopantothenate/pantothenate synthetase compare
MMP_RS05845 -2.0 -1.6 tRNA-intron lyase compare
MMP_RS07685 -1.9 -6.1 TIGR01212 family radical SAM protein compare
MMP_RS00520 -1.9 -2.1 RNA polymerase Rpb4 family protein compare
MMP_RS00115 -1.9 -9.5 radical SAM protein compare
MMP_RS01880 -1.9 -8.6 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS01875 -1.9 -9.2 N-acetyltransferase compare
MMP_RS02110 -1.9 -2.8 hypothetical protein compare
MMP_RS07005 -1.9 -0.7 4Fe-4S binding protein compare
MMP_RS01885 -1.9 -8.1 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS08300 -1.9 -1.0 metal-sulfur cluster assembly factor compare
MMP_RS07820 -1.9 -4.9 UPF0104 family protein compare
MMP_RS02780 -1.8 -5.1 hypothetical protein compare
MMP_RS05640 -1.8 -5.9 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS06175 -1.8 -4.5 winged helix-turn-helix transcriptional regulator compare
MMP_RS06375 -1.8 -4.5 ATP-dependent sacrificial sulfur transferase LarE compare
MMP_RS08790 -1.8 -1.5 translation initiation factor IF-2 subunit alpha compare
MMP_RS00035 -1.8 -5.4 DUF2098 family protein compare
MMP_RS06980 -1.8 -7.4 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMP_RS06105 -1.8 -6.6 hydrogenase maturation peptidase HycI compare
MMP_RS01335 -1.8 -2.5 prefoldin subunit beta compare
MMP_RS02135 -1.7 -4.2 DUF5612 domain-containing protein compare
MMP_RS08635 -1.7 -2.0 UbiA family prenyltransferase compare
MMP_RS02800 -1.7 -6.1 nucleotidyltransferase domain-containing protein compare
MMP_RS04900 -1.7 -11.9 hypothetical protein compare
MMP_RS07555 -1.7 -1.0 monovalent cation/H+ antiporter subunit E compare
MMP_RS06110 -1.7 -3.1 ATP-dependent protease LonB compare
MMP_RS04615 -1.6 -4.1 PDGLE domain-containing protein compare
MMP_RS01665 -1.6 -2.6 DUF2111 domain-containing protein compare
MMP_RS07705 -1.6 -7.1 transcriptional regulator compare
MMP_RS07875 -1.6 -6.0 hypothetical protein compare
MMP_RS02930 -1.5 -2.8 class I SAM-dependent methyltransferase compare
MMP_RS05535 -1.5 -3.0 hypothetical protein compare
MMP_RS00320 -1.5 -1.9 class I SAM-dependent methyltransferase compare
MMP_RS06865 -1.5 -1.7 HypC/HybG/HupF family hydrogenase formation chaperone compare
MMP_RS07535 -1.5 -7.8 4Fe-4S binding protein compare
MMP_RS05815 -1.5 -1.9 NOL1/NOP2/sun family putative RNA methylase compare
MMP_RS01085 -1.5 -2.0 hypothetical protein compare
MMP_RS01900 -1.5 -9.3 hypothetical protein compare
MMP_RS07180 -1.5 -4.6 DEAD/DEAH box helicase compare
MMP_RS05020 -1.5 -3.6 hypothetical protein compare
MMP_RS03420 -1.5 -2.1 acetolactate synthase small subunit compare
MMP_RS05550 -1.4 -0.8 cation:proton antiporter compare
MMP_RS08460 -1.4 -1.8 proteasome-activating nucleotidase compare
MMP_RS05425 -1.4 -4.7 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS04870 -1.4 -5.2 TIGR02253 family HAD-type hydrolase compare
MMP_RS01180 -1.4 -0.8 XTP/dITP diphosphatase compare
MMP_RS05345 -1.4 -5.3 hypothetical protein compare
MMP_RS06670 -1.4 -3.9 glucose-6-phosphate isomerase compare
MMP_RS01895 -1.4 -7.9 flippase compare
MMP_RS07600 -1.4 -1.5 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS04500 -1.4 -10.4 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS08660 -1.4 -7.2 DHH family phosphoesterase compare
MMP_RS05440 -1.4 -6.1 winged helix-turn-helix transcriptional regulator compare


Specific Phenotypes

For 2 genes in this experiment

For nitrogen source Cytosine in Methanococcus maripaludis S2

For nitrogen source Cytosine across organisms