Experiment set10S182 for Methanococcus maripaludis S2

Compare to:

H2 N-free with 10mM Cytidine

200 most important genes:

  gene name fitness t score description  
MMP_RS01020 -6.2 -0.8 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS06625 -4.4 -2.7 DNA primase compare
MMP_RS07435 -4.2 -2.0 GMP synthase subunit A compare
MMP_RS01610 -4.1 -3.6 hypothetical protein compare
MMP_RS02010 -4.1 -11.7 PHP domain-containing protein compare
MMP_RS01325 -4.0 -2.5 dihydroneopterin aldolase family protein compare
MMP_RS01500 -4.0 -2.6 CBS domain-containing protein compare
MMP_RS04440 -4.0 -11.5 nitrogenase iron protein compare
MMP_RS04445 -3.9 -9.7 P-II family nitrogen regulator compare
MMP_RS04470 -3.9 -20.8 nitrogenase compare
MMP_RS04460 -3.9 -22.5 nitrogenase molybdenum-iron protein subunit beta compare
MMP_RS04450 -3.9 -16.7 P-II family nitrogen regulator compare
MMP_RS04465 -3.9 -17.4 nitrogenase iron-molybdenum cofactor biosynthesis protein NifE compare
MMP_RS04455 -3.8 -23.2 nitrogenase subunit alpha compare
MMP_RS02240 -3.8 -3.7 methanogenesis marker 7 protein compare
MMP_RS06730 -3.8 -1.6 phosphopantothenate/pantothenate synthetase compare
MMP_RS08165 -3.8 -1.7 phosphoglycerate dehydrogenase compare
MMP_RS02685 -3.7 -13.5 molybdate ABC transporter substrate-binding protein compare
MMP_RS08785 -3.7 -1.2 RNA-protein complex protein Nop10 compare
MMP_RS03315 -3.7 -1.4 ferrous iron transport protein A compare
MMP_RS00555 -3.6 -8.4 MFS transporter compare
MMP_RS07635 -3.6 -7.7 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS04890 -3.6 -0.9 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS08860 -3.6 -6.0 MinD/ParA family protein compare
MMP_RS03035 -3.6 -4.6 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS07345 -3.5 -7.9 glycine synthesis protein GlyXL (from data) compare
MMP_RS02670 -3.5 -12.3 ATP-binding cassette domain-containing protein compare
MMP_RS02680 -3.5 -7.7 ABC transporter permease compare
MMP_RS02730 -3.5 -12.9 ModD protein compare
MMP_RS03450 -3.5 -2.5 glycine synthesis protein GlyXS (from data) compare
MMP_RS08720 -3.4 -1.6 4Fe-4S binding protein compare
MMP_RS07845 -3.4 -1.6 LL-diaminopimelate aminotransferase compare
MMP_RS02675 -3.4 -3.2 hypothetical protein compare
MMP_RS01795 -3.4 -1.5 methanogenesis marker 6 protein compare
MMP_RS01455 -3.4 -9.7 nickel pincer cofactor biosynthesis protein LarC compare
MMP_RS01830 -3.3 -1.8 tRNA-Val compare
MMP_RS07185 -3.3 -13.6 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS01175 -3.2 -6.4 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS01220 -3.2 -7.5 hypothetical protein compare
MMP_RS02145 -3.2 -11.2 winged helix-turn-helix transcriptional regulator compare
MMP_RS00750 -3.2 -2.4 fumarate hydratase compare
MMP_RS01380 -3.2 -5.3 PHP domain-containing protein compare
MMP_RS07525 -3.1 -9.4 4Fe-4S binding protein compare
MMP_RS00040 -3.1 -6.3 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS02340 -3.0 -2.0 DNA-directed RNA polymerase subunit E'' compare
MMP_RS07445 -3.0 -9.3 helix-turn-helix domain-containing protein compare
MMP_RS06895 -3.0 -1.9 selenocysteine-specific translation elongation factor compare
MMP_RS02800 -3.0 -9.2 nucleotidyltransferase domain-containing protein compare
MMP_RS03025 -3.0 -5.9 molybdenum cofactor guanylyltransferase compare
MMP_RS07355 -2.9 -0.8 transcription factor S compare
MMP_RS07600 -2.9 -2.5 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS04710 -2.9 -2.3 hypothetical protein compare
MMP_RS06475 -2.9 -5.6 FAD-dependent oxidoreductase compare
MMP_RS08500 -2.9 -5.9 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMP_RS00130 -2.8 -1.2 nickel-responsive transcriptional regulator NikR compare
MMP_RS00915 -2.8 -5.5 DUF116 domain-containing protein compare
MMP_RS00810 -2.8 -8.6 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS06270 -2.8 -5.1 TIGR00300 family protein compare
MMP_RS06020 -2.8 -4.8 archaeoflavoprotein AfpA compare
MMP_RS05265 -2.8 -2.3 2-isopropylmalate synthase compare
MMP_RS01755 -2.8 -1.2 DUF2097 domain-containing protein compare
MMP_RS02245 -2.8 -3.4 hypothetical protein compare
MMP_RS07695 -2.8 -8.7 DUF3236 domain-containing protein compare
MMP_RS03110 -2.8 -5.0 glycosyltransferase family 2 protein compare
MMP_RS04585 -2.8 -13.1 AIR synthase related protein compare
MMP_RS08645 -2.8 -8.1 UPF0179 family protein compare
MMP_RS00725 -2.7 -7.9 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS06375 -2.7 -5.8 ATP-dependent sacrificial sulfur transferase LarE compare
MMP_RS01005 -2.7 -1.4 riboflavin synthase compare
MMP_RS00300 -2.7 -0.7 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS08705 -2.7 -7.0 sulfopyruvate decarboxylase subunit beta compare
MMP_RS06295 -2.7 -9.2 methanogenesis marker 14 protein compare
MMP_RS00735 -2.7 -3.6 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS04790 -2.7 -14.4 4-hydroxy-tetrahydrodipicolinate reductase compare
MMP_RS07755 -2.7 -1.4 DUF555 domain-containing protein compare
MMP_RS05500 -2.7 -8.5 2-isopropylmalate synthase compare
MMP_RS03205 -2.7 -1.8 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS07730 -2.7 -1.8 pyruvate synthase subunit beta compare
MMP_RS03580 -2.7 -3.9 signal recognition particle-docking protein FtsY compare
MMP_RS03700 -2.6 -8.0 sodium:proton antiporter compare
MMP_RS03960 -2.6 -1.7 hypothetical protein compare
MMP_RS00310 -2.6 -9.1 CBS domain-containing protein compare
MMP_RS02355 -2.6 -2.4 30S ribosomal protein S27ae compare
MMP_RS04215 -2.6 -8.8 nickel pincer cofactor biosynthesis protein LarB compare
MMP_RS03600 -2.6 -2.0 triose-phosphate isomerase compare
MMP_RS03445 -2.6 -1.0 methanogenesis marker 17 protein compare
MMP_RS07700 -2.6 -10.0 DUF1188 domain-containing protein compare
MMP_RS07200 -2.6 -6.8 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS01725 -2.6 -4.6 class I SAM-dependent methyltransferase family protein compare
MMP_RS03435 -2.6 -2.0 ketol-acid reductoisomerase compare
MMP_RS06285 -2.5 -3.1 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS07380 -2.5 -2.1 transcription elongation factor Spt5 compare
MMP_RS06725 -2.5 -11.3 hypothetical protein compare
MMP_RS08210 -2.5 -2.1 phosphatidylglycerophosphatase A compare
MMP_RS01225 -2.5 -5.1 DUF5379 domain-containing protein compare
MMP_RS01385 -2.5 -0.6 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS08715 -2.5 -2.0 formylmethanofuran dehydrogenase subunit B compare
MMP_RS00985 -2.5 -4.7 CDC48 family AAA ATPase compare
MMP_RS02190 -2.5 -2.8 sulfopyruvate decarboxylase subunit alpha compare
MMP_RS08855 -2.5 -9.7 hypothetical protein compare
MMP_RS08650 -2.5 -3.5 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS05430 -2.5 -6.8 TIGR00288 family NYN domain-containing protein compare
MMP_RS00685 -2.5 -4.3 2-phospho-L-lactate guanylyltransferase compare
MMP_RS02110 -2.4 -2.4 hypothetical protein compare
MMP_RS01335 -2.4 -2.1 prefoldin subunit beta compare
MMP_RS01445 -2.4 -8.7 hypothetical protein compare
MMP_RS06630 -2.4 -1.0 UPF0058 family protein compare
MMP_RS04850 -2.4 -16.6 UPF0254 family protein compare
MMP_RS06855 -2.4 -11.1 hypothetical protein compare
MMP_RS06840 -2.4 -0.9 DNA-directed RNA polymerase subunit N compare
MMP_RS04500 -2.4 -15.3 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS06120 -2.4 -2.3 UPF0147 family protein compare
MMP_RS04870 -2.3 -5.6 TIGR02253 family HAD-type hydrolase compare
MMP_RS02165 -2.3 -8.1 tRNA-dihydrouridine synthase compare
MMP_RS07075 -2.3 -4.3 phosphomannomutase/phosphoglucomutase compare
MMP_RS03640 -2.3 -3.2 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS02345 -2.3 -3.0 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS05930 -2.3 -1.9 3-isopropylmalate dehydratase large subunit compare
MMP_RS04090 -2.3 -2.7 hypothetical protein compare
MMP_RS07390 -2.3 -2.4 cell division protein FtsZ compare
MMP_RS02875 -2.3 -7.8 chorismate pyruvate-lyase family protein compare
MMP_RS02195 -2.2 -3.3 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS00730 -2.2 -4.5 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS07605 -2.2 -4.0 diadenylate cyclase compare
MMP_RS01800 -2.2 -4.3 TIGR00303 family protein compare
MMP_RS07750 -2.2 -5.0 DUF357 domain-containing protein compare
MMP_RS07365 -2.2 -11.7 2-phosphoglycerate kinase compare
MMP_RS04955 -2.1 -5.8 DNA topoisomerase I compare
MMP_RS06925 -2.1 -2.1 ribonuclease VapC4 compare
MMP_RS05540 -2.1 -2.9 hypothetical protein compare
MMP_RS06370 -2.1 -4.4 biotin synthase BioB compare
MMP_RS01545 -2.1 -1.0 CBS domain-containing protein compare
MMP_RS02900 -2.1 -0.5 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS07575 -2.1 -3.2 RNA ligase partner protein compare
MMP_RS04685 -2.1 -2.6 DUF126 domain-containing protein compare
MMP_RS00115 -2.0 -9.7 radical SAM protein compare
MMP_RS02175 -2.0 -0.9 DUF1611 domain-containing protein compare
MMP_RS08820 -2.0 -5.1 hypothetical protein compare
MMP_RS05280 -2.0 -6.6 COG1361 S-layer family protein compare
MMP_RS05020 -2.0 -4.6 hypothetical protein compare
MMP_RS06400 -2.0 -1.7 4Fe-4S binding protein compare
MMP_RS08095 -2.0 -7.1 dethiobiotin synthase compare
MMP_RS01665 -2.0 -3.2 DUF2111 domain-containing protein compare
MMP_RS00895 -1.9 -2.7 hypothetical protein compare
MMP_RS06885 -1.9 -2.4 50S ribosome-binding GTPase compare
MMP_RS08195 -1.9 -8.2 hypothetical protein compare
MMP_RS05925 -1.9 -4.3 small nuclear ribonucleoprotein compare
MMP_RS03420 -1.9 -2.6 acetolactate synthase small subunit compare
MMP_RS00305 -1.9 -1.3 phosphoribosyl-ATP diphosphatase compare
MMP_RS07535 -1.8 -6.6 4Fe-4S binding protein compare
MMP_RS08660 -1.8 -6.7 DHH family phosphoesterase compare
MMP_RS08105 -1.8 -4.8 6-carboxyhexanoate--CoA ligase compare
MMP_RS08635 -1.8 -1.6 UbiA family prenyltransferase compare
MMP_RS03090 -1.8 -7.3 cation:proton antiporter compare
MMP_RS06395 -1.8 -3.1 ThiF family adenylyltransferase compare
MMP_RS00035 -1.8 -6.1 DUF2098 family protein compare
MMP_RS09020 -1.8 -1.5 hypothetical protein compare
MMP_RS07530 -1.8 -7.4 4Fe-4S binding protein compare
MMP_RS08570 -1.8 -7.6 coenzyme F420-0:L-glutamate ligase compare
MMP_RS06865 -1.7 -1.8 HypC/HybG/HupF family hydrogenase formation chaperone compare
MMP_RS07710 -1.7 -5.2 cell division protein FtsZ compare
MMP_RS00455 -1.7 -3.6 orotate phosphoribosyltransferase-like protein compare
MMP_RS01195 -1.7 -1.0 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS08435 -1.7 -1.5 Era-like GTP-binding protein compare
MMP_RS04900 -1.7 -10.3 hypothetical protein compare
MMP_RS02780 -1.6 -5.7 hypothetical protein compare
MMP_RS03400 -1.6 -2.1 archease compare
MMP_RS06980 -1.6 -6.2 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMP_RS01265 -1.6 -1.4 hypothetical protein compare
MMP_RS03535 -1.6 -2.1 helix-turn-helix transcriptional regulator compare
MMP_RS05285 -1.6 -6.2 MMPL family transporter compare
MMP_RS08330 -1.6 -4.0 NADH-quinone oxidoreductase subunit H compare
MMP_RS07955 -1.6 -3.1 FumA C-terminus/TtdB family hydratase beta subunit compare
MMP_RS01875 -1.6 -7.4 N-acetyltransferase compare
MMP_RS05555 -1.6 -1.1 DUF4040 domain-containing protein compare
MMP_RS04720 -1.6 -2.8 DedA family protein compare
MMP_RS01700 -1.5 -0.6 dihydroxy-acid dehydratase compare
MMP_RS06355 -1.5 -1.9 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS06230 -1.5 -2.0 helix-turn-helix domain-containing protein compare
MMP_RS07820 -1.5 -4.3 UPF0104 family protein compare
MMP_RS00515 -1.5 -0.7 DUF655 domain-containing protein compare
MMP_RS08155 -1.5 -5.1 hypothetical protein compare
MMP_RS02955 -1.5 -3.2 DJ-1/PfpI family protein compare
MMP_RS01180 -1.5 -0.9 XTP/dITP diphosphatase compare
MMP_RS05515 -1.4 -3.1 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS07685 -1.4 -5.5 TIGR01212 family radical SAM protein compare
MMP_RS00315 -1.4 -5.3 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS05920 -1.4 -0.4 50S ribosomal protein L37e compare
MMP_RS08300 -1.4 -0.7 metal-sulfur cluster assembly factor compare
MMP_RS08790 -1.3 -1.4 translation initiation factor IF-2 subunit alpha compare
MMP_RS01900 -1.3 -8.5 hypothetical protein compare
MMP_RS06670 -1.3 -3.9 glucose-6-phosphate isomerase compare
MMP_RS05485 -1.3 -6.3 cysteine--tRNA ligase compare
MMP_RS03095 -1.3 -2.5 diphthine synthase compare
MMP_RS02135 -1.3 -2.7 DUF5612 domain-containing protein compare
MMP_RS05420 -1.3 -2.4 DUF61 family protein compare
MMP_RS05295 -1.3 -6.4 minichromosome maintenance protein MCM compare
MMP_RS06175 -1.3 -3.3 winged helix-turn-helix transcriptional regulator compare
MMP_RS00320 -1.3 -1.2 class I SAM-dependent methyltransferase compare
MMP_RS05535 -1.3 -3.2 hypothetical protein compare


Specific Phenotypes

For 1 genes in this experiment

For nitrogen source Cytidine in Methanococcus maripaludis S2

For nitrogen source Cytidine across organisms