Experiment set10S181 for Methanococcus maripaludis S2

Compare to:

H2 N-free with 5mM Inosine

200 most important genes:

  gene name fitness t score description  
MMP_RS06400 -6.2 -1.2 4Fe-4S binding protein compare
MMP_RS01020 -6.2 -0.7 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS09020 -5.8 -1.1 hypothetical protein compare
MMP_RS01500 -5.6 -2.2 CBS domain-containing protein compare
MMP_RS01795 -5.6 -1.1 methanogenesis marker 6 protein compare
MMP_RS03315 -5.3 -1.0 ferrous iron transport protein A compare
MMP_RS06730 -5.1 -1.1 phosphopantothenate/pantothenate synthetase compare
MMP_RS02240 -4.8 -3.1 methanogenesis marker 7 protein compare
MMP_RS01175 -4.7 -4.9 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS08165 -4.6 -2.0 phosphoglycerate dehydrogenase compare
MMP_RS02675 -4.6 -2.9 hypothetical protein compare
MMP_RS00300 -4.6 -0.5 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS04440 -4.6 -11.0 nitrogenase iron protein compare
MMP_RS01455 -4.5 -8.1 nickel pincer cofactor biosynthesis protein LarC compare
MMP_RS05265 -4.5 -1.7 2-isopropylmalate synthase compare
MMP_RS03035 -4.4 -3.9 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS05930 -4.4 -1.8 3-isopropylmalate dehydratase large subunit compare
MMP_RS04460 -4.3 -20.5 nitrogenase molybdenum-iron protein subunit beta compare
MMP_RS04455 -4.3 -23.6 nitrogenase subunit alpha compare
MMP_RS04465 -4.3 -21.6 nitrogenase iron-molybdenum cofactor biosynthesis protein NifE compare
MMP_RS03475 -4.2 -0.5 hypothetical protein compare
MMP_RS07845 -4.2 -1.9 LL-diaminopimelate aminotransferase compare
MMP_RS04450 -4.2 -15.2 P-II family nitrogen regulator compare
MMP_RS02145 -4.2 -10.4 winged helix-turn-helix transcriptional regulator compare
MMP_RS04470 -4.2 -18.3 nitrogenase compare
MMP_RS08715 -4.2 -1.8 formylmethanofuran dehydrogenase subunit B compare
MMP_RS00060 -4.2 -1.8 3-dehydroquinate synthase II compare
MMP_RS03960 -4.2 -1.3 hypothetical protein compare
MMP_RS02685 -4.1 -11.7 molybdate ABC transporter substrate-binding protein compare
MMP_RS05500 -4.1 -8.3 2-isopropylmalate synthase compare
MMP_RS04445 -4.1 -7.6 P-II family nitrogen regulator compare
MMP_RS06625 -4.0 -2.1 DNA primase compare
MMP_RS02670 -4.0 -14.3 ATP-binding cassette domain-containing protein compare
MMP_RS06270 -3.9 -6.1 TIGR00300 family protein compare
MMP_RS00555 -3.9 -7.8 MFS transporter compare
MMP_RS01545 -3.9 -0.9 CBS domain-containing protein compare
MMP_RS03025 -3.8 -5.6 molybdenum cofactor guanylyltransferase compare
MMP_RS05845 -3.8 -1.4 tRNA-intron lyase compare
MMP_RS04685 -3.8 -2.9 DUF126 domain-containing protein compare
MMP_RS07345 -3.8 -6.8 glycine synthesis protein GlyXL (from data) compare
MMP_RS02010 -3.7 -9.8 PHP domain-containing protein compare
MMP_RS01830 -3.7 -1.5 tRNA-Val compare
MMP_RS03435 -3.7 -1.8 ketol-acid reductoisomerase compare
MMP_RS06375 -3.6 -5.3 ATP-dependent sacrificial sulfur transferase LarE compare
MMP_RS01325 -3.6 -2.3 dihydroneopterin aldolase family protein compare
MMP_RS01225 -3.6 -5.1 DUF5379 domain-containing protein compare
MMP_RS07525 -3.6 -7.7 4Fe-4S binding protein compare
MMP_RS06475 -3.6 -4.9 FAD-dependent oxidoreductase compare
MMP_RS02195 -3.5 -3.4 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS01755 -3.5 -1.0 DUF2097 domain-containing protein compare
MMP_RS04790 -3.5 -12.5 4-hydroxy-tetrahydrodipicolinate reductase compare
MMP_RS04215 -3.5 -7.6 nickel pincer cofactor biosynthesis protein LarB compare
MMP_RS04890 -3.5 -0.8 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS06315 -3.5 -0.6 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS07185 -3.5 -12.6 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS03445 -3.5 -0.8 methanogenesis marker 17 protein compare
MMP_RS07635 -3.4 -8.3 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS00985 -3.4 -5.2 CDC48 family AAA ATPase compare
MMP_RS02680 -3.4 -5.5 ABC transporter permease compare
MMP_RS07365 -3.4 -13.3 2-phosphoglycerate kinase compare
MMP_RS01800 -3.4 -3.6 TIGR00303 family protein compare
MMP_RS07575 -3.4 -4.0 RNA ligase partner protein compare
MMP_RS08635 -3.3 -1.5 UbiA family prenyltransferase compare
MMP_RS01005 -3.3 -1.1 riboflavin synthase compare
MMP_RS08595 -3.3 -0.9 flagellar protein C compare
MMP_RS08860 -3.3 -5.8 MinD/ParA family protein compare
MMP_RS08645 -3.2 -7.5 UPF0179 family protein compare
MMP_RS02355 -3.2 -2.8 30S ribosomal protein S27ae compare
MMP_RS03700 -3.2 -8.8 sodium:proton antiporter compare
MMP_RS03110 -3.2 -7.0 glycosyltransferase family 2 protein compare
MMP_RS05765 -3.2 -6.6 M42 family metallopeptidase compare
MMP_RS06295 -3.1 -8.3 methanogenesis marker 14 protein compare
MMP_RS08500 -3.1 -5.1 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMP_RS08330 -3.1 -5.7 NADH-quinone oxidoreductase subunit H compare
MMP_RS07390 -3.1 -2.5 cell division protein FtsZ compare
MMP_RS00735 -3.1 -3.3 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS00310 -3.0 -11.7 CBS domain-containing protein compare
MMP_RS04710 -3.0 -1.7 hypothetical protein compare
MMP_RS01445 -3.0 -6.5 hypothetical protein compare
MMP_RS07600 -3.0 -2.2 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS08785 -3.0 -1.0 RNA-protein complex protein Nop10 compare
MMP_RS06855 -3.0 -11.0 hypothetical protein compare
MMP_RS00455 -2.9 -9.9 orotate phosphoribosyltransferase-like protein compare
MMP_RS02730 -2.9 -8.0 ModD protein compare
MMP_RS01385 -2.9 -0.5 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS04500 -2.9 -14.0 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS08095 -2.9 -6.5 dethiobiotin synthase compare
MMP_RS08650 -2.9 -3.7 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS08210 -2.9 -2.0 phosphatidylglycerophosphatase A compare
MMP_RS05640 -2.9 -7.6 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS01610 -2.9 -2.5 hypothetical protein compare
MMP_RS05550 -2.9 -0.6 cation:proton antiporter compare
MMP_RS07755 -2.9 -1.0 DUF555 domain-containing protein compare
MMP_RS01725 -2.9 -4.3 class I SAM-dependent methyltransferase family protein compare
MMP_RS07435 -2.8 -1.6 GMP synthase subunit A compare
MMP_RS06230 -2.8 -1.9 helix-turn-helix domain-containing protein compare
MMP_RS04585 -2.8 -11.8 AIR synthase related protein compare
MMP_RS08195 -2.8 -9.4 hypothetical protein compare
MMP_RS00515 -2.8 -0.6 DUF655 domain-containing protein compare
MMP_RS01885 -2.8 -11.4 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS06630 -2.8 -0.7 UPF0058 family protein compare
MMP_RS07075 -2.8 -4.2 phosphomannomutase/phosphoglucomutase compare
MMP_RS03450 -2.7 -2.1 glycine synthesis protein GlyXS (from data) compare
MMP_RS00915 -2.7 -6.2 DUF116 domain-containing protein compare
MMP_RS01700 -2.7 -0.6 dihydroxy-acid dehydratase compare
MMP_RS02245 -2.7 -2.7 hypothetical protein compare
MMP_RS06725 -2.7 -10.7 hypothetical protein compare
MMP_RS01220 -2.7 -7.5 hypothetical protein compare
MMP_RS00895 -2.7 -3.5 hypothetical protein compare
MMP_RS00040 -2.7 -4.9 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS02345 -2.7 -3.1 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS07605 -2.7 -3.6 diadenylate cyclase compare
MMP_RS02135 -2.7 -4.1 DUF5612 domain-containing protein compare
MMP_RS02340 -2.6 -1.5 DNA-directed RNA polymerase subunit E'' compare
MMP_RS00315 -2.6 -6.4 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS00685 -2.6 -3.0 2-phospho-L-lactate guanylyltransferase compare
MMP_RS07090 -2.6 -7.3 tRNA (adenine-N1)-methyltransferase compare
MMP_RS08100 -2.6 -5.6 8-amino-7-oxononanoate synthase compare
MMP_RS04780 -2.6 -2.9 ribonuclease P compare
MMP_RS07700 -2.6 -10.7 DUF1188 domain-containing protein compare
MMP_RS06285 -2.6 -2.5 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS06370 -2.6 -4.7 biotin synthase BioB compare
MMP_RS02800 -2.5 -5.1 nucleotidyltransferase domain-containing protein compare
MMP_RS07445 -2.5 -4.9 helix-turn-helix domain-containing protein compare
MMP_RS06925 -2.5 -1.9 ribonuclease VapC4 compare
MMP_RS07695 -2.5 -4.4 DUF3236 domain-containing protein compare
MMP_RS07200 -2.5 -5.4 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS01265 -2.4 -3.0 hypothetical protein compare
MMP_RS05280 -2.4 -7.7 COG1361 S-layer family protein compare
MMP_RS00695 -2.4 -0.5 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS03600 -2.4 -1.8 triose-phosphate isomerase compare
MMP_RS05515 -2.4 -5.3 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS05285 -2.4 -6.3 MMPL family transporter compare
MMP_RS07380 -2.4 -1.7 transcription elongation factor Spt5 compare
MMP_RS04850 -2.4 -13.3 UPF0254 family protein compare
MMP_RS05540 -2.4 -3.5 hypothetical protein compare
MMP_RS00305 -2.3 -1.3 phosphoribosyl-ATP diphosphatase compare
MMP_RS06020 -2.3 -3.2 archaeoflavoprotein AfpA compare
MMP_RS08435 -2.3 -1.8 Era-like GTP-binding protein compare
MMP_RS02280 -2.3 -0.7 DUF211 domain-containing protein compare
MMP_RS00115 -2.3 -7.8 radical SAM protein compare
MMP_RS02190 -2.3 -2.4 sulfopyruvate decarboxylase subunit alpha compare
MMP_RS06885 -2.3 -2.3 50S ribosome-binding GTPase compare
MMP_RS00810 -2.3 -6.4 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS01075 -2.3 -1.8 hypothetical protein compare
MMP_RS01875 -2.3 -11.9 N-acetyltransferase compare
MMP_RS05555 -2.3 -1.0 DUF4040 domain-containing protein compare
MMP_RS03580 -2.3 -3.2 signal recognition particle-docking protein FtsY compare
MMP_RS04955 -2.3 -5.0 DNA topoisomerase I compare
MMP_RS07535 -2.2 -8.6 4Fe-4S binding protein compare
MMP_RS01880 -2.2 -7.7 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS05425 -2.2 -4.0 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS07645 -2.2 -5.1 aldehyde dehydrogenase family protein compare
MMP_RS07555 -2.1 -0.7 monovalent cation/H+ antiporter subunit E compare
MMP_RS00725 -2.1 -5.5 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS04090 -2.1 -1.8 hypothetical protein compare
MMP_RS08720 -2.1 -1.2 4Fe-4S binding protein compare
MMP_RS07730 -2.1 -1.4 pyruvate synthase subunit beta compare
MMP_RS06940 -2.1 -3.6 polyprenyl diphosphate synthase compare
MMP_RS01335 -2.1 -1.4 prefoldin subunit beta compare
MMP_RS06340 -2.1 -5.3 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS01380 -2.1 -4.0 PHP domain-containing protein compare
MMP_RS01890 -2.1 -4.0 nucleotide sugar dehydrogenase compare
MMP_RS01250 -2.1 -3.9 tRNA (guanine(26)-N(2))-dimethyltransferase compare
MMP_RS07710 -2.1 -6.2 cell division protein FtsZ compare
MMP_RS06895 -2.1 -1.2 selenocysteine-specific translation elongation factor compare
MMP_RS05430 -2.1 -3.8 TIGR00288 family NYN domain-containing protein compare
MMP_RS08790 -2.0 -1.5 translation initiation factor IF-2 subunit alpha compare
MMP_RS08440 -2.0 -2.4 cell division protein SepF compare
MMP_RS01925 -2.0 -8.5 DUF1616 domain-containing protein compare
MMP_RS03015 -2.0 -3.9 GTP 3' 8-cyclase MoaA compare
MMP_RS06670 -2.0 -5.0 glucose-6-phosphate isomerase compare
MMP_RS03640 -2.0 -3.7 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS08105 -1.9 -4.6 6-carboxyhexanoate--CoA ligase compare
MMP_RS07735 -1.9 -0.3 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS06355 -1.9 -1.7 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS02900 -1.9 -0.4 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS05925 -1.9 -2.9 small nuclear ribonucleoprotein compare
MMP_RS07955 -1.9 -4.2 FumA C-terminus/TtdB family hydratase beta subunit compare
MMP_RS05460 -1.9 -6.9 YcaO-related McrA-glycine thioamidation protein compare
MMP_RS01900 -1.9 -10.2 hypothetical protein compare
MMP_RS08300 -1.9 -0.7 metal-sulfur cluster assembly factor compare
MMP_RS06110 -1.9 -2.1 ATP-dependent protease LonB compare
MMP_RS04265 -1.9 -2.2 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS06120 -1.8 -1.6 UPF0147 family protein compare
MMP_RS07875 -1.8 -4.6 hypothetical protein compare
MMP_RS08155 -1.8 -5.1 hypothetical protein compare
MMP_RS05920 -1.8 -0.4 50S ribosomal protein L37e compare
MMP_RS06105 -1.8 -5.0 hydrogenase maturation peptidase HycI compare
MMP_RS07580 -1.8 -2.1 DUF356 domain-containing protein compare
MMP_RS07860 -1.8 -0.7 hypothetical protein compare
MMP_RS04195 -1.8 -2.9 flavodoxin compare
MMP_RS06900 -1.8 -2.3 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS03590 -1.8 -5.0 METTL5 family protein compare
MMP_RS08705 -1.7 -3.3 sulfopyruvate decarboxylase subunit beta compare
MMP_RS00730 -1.7 -2.7 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS07750 -1.7 -2.6 DUF357 domain-containing protein compare
MMP_RS03140 -1.7 -5.1 hypothetical protein compare
MMP_RS05440 -1.7 -6.2 winged helix-turn-helix transcriptional regulator compare
MMP_RS00900 -1.7 -1.4 50S ribosomal protein L39e compare


Specific Phenotypes

For 4 genes in this experiment

For nitrogen source Inosine in Methanococcus maripaludis S2

For nitrogen source Inosine across organisms