Experiment set10S179 for Methanococcus maripaludis S2

Compare to:

H2 N-free with 10mM Uridine

200 most important genes:

  gene name fitness t score description  
MMP_RS03300 -4.6 -0.8 TOBE domain-containing protein compare
MMP_RS01500 -4.0 -2.9 CBS domain-containing protein compare
MMP_RS01385 -3.8 -0.6 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS01225 -3.5 -4.9 DUF5379 domain-containing protein compare
MMP_RS07860 -3.5 -1.0 hypothetical protein compare
MMP_RS08715 -3.4 -2.2 formylmethanofuran dehydrogenase subunit B compare
MMP_RS00750 -3.0 -2.7 fumarate hydratase compare
MMP_RS07545 -2.9 -1.0 HTH domain-containing protein compare
MMP_RS02340 -2.9 -2.1 DNA-directed RNA polymerase subunit E'' compare
MMP_RS02010 -2.9 -10.3 PHP domain-containing protein compare
MMP_RS07435 -2.8 -1.8 GMP synthase subunit A compare
MMP_RS08165 -2.8 -2.5 phosphoglycerate dehydrogenase compare
MMP_RS08440 -2.8 -3.0 cell division protein SepF compare
MMP_RS01380 -2.8 -5.9 PHP domain-containing protein compare
MMP_RS00730 -2.8 -6.1 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS02355 -2.7 -3.0 30S ribosomal protein S27ae compare
MMP_RS01020 -2.7 -1.2 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS01175 -2.7 -5.1 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS00040 -2.7 -6.8 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS01005 -2.7 -1.2 riboflavin synthase compare
MMP_RS07635 -2.6 -8.3 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS07600 -2.6 -2.3 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS08650 -2.6 -3.7 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS01700 -2.6 -0.6 dihydroxy-acid dehydratase compare
MMP_RS08860 -2.6 -5.8 MinD/ParA family protein compare
MMP_RS00725 -2.6 -8.0 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS04465 -2.6 -14.4 nitrogenase iron-molybdenum cofactor biosynthesis protein NifE compare
MMP_RS07730 -2.5 -1.9 pyruvate synthase subunit beta compare
MMP_RS04460 -2.5 -15.8 nitrogenase molybdenum-iron protein subunit beta compare
MMP_RS07390 -2.5 -2.8 cell division protein FtsZ compare
MMP_RS00555 -2.5 -9.9 MFS transporter compare
MMP_RS02280 -2.5 -0.8 DUF211 domain-containing protein compare
MMP_RS02730 -2.4 -9.4 ModD protein compare
MMP_RS04710 -2.4 -1.8 hypothetical protein compare
MMP_RS07345 -2.4 -7.7 glycine synthesis protein GlyXL (from data) compare
MMP_RS06895 -2.4 -1.6 selenocysteine-specific translation elongation factor compare
MMP_RS02190 -2.4 -3.1 sulfopyruvate decarboxylase subunit alpha compare
MMP_RS04445 -2.4 -7.2 P-II family nitrogen regulator compare
MMP_RS00735 -2.4 -3.4 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS02135 -2.4 -5.2 DUF5612 domain-containing protein compare
MMP_RS00685 -2.4 -3.9 2-phospho-L-lactate guanylyltransferase compare
MMP_RS06285 -2.3 -2.6 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS08500 -2.3 -5.3 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMP_RS04470 -2.3 -13.2 nitrogenase compare
MMP_RS04450 -2.3 -10.5 P-II family nitrogen regulator compare
MMP_RS02685 -2.3 -10.0 molybdate ABC transporter substrate-binding protein compare
MMP_RS08745 -2.3 -7.7 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS04455 -2.3 -13.6 nitrogenase subunit alpha compare
MMP_RS07845 -2.3 -2.1 LL-diaminopimelate aminotransferase compare
MMP_RS07525 -2.3 -7.1 4Fe-4S binding protein compare
MMP_RS00810 -2.3 -7.7 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS02165 -2.3 -7.9 tRNA-dihydrouridine synthase compare
MMP_RS03110 -2.2 -7.0 glycosyltransferase family 2 protein compare
MMP_RS03445 -2.2 -0.9 methanogenesis marker 17 protein compare
MMP_RS04440 -2.2 -11.0 nitrogenase iron protein compare
MMP_RS06315 -2.2 -0.7 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS02670 -2.2 -10.3 ATP-binding cassette domain-containing protein compare
MMP_RS01220 -2.2 -7.4 hypothetical protein compare
MMP_RS02675 -2.2 -2.5 hypothetical protein compare
MMP_RS02680 -2.2 -5.7 ABC transporter permease compare
MMP_RS05435 -2.1 -7.4 5'/3'-nucleotidase SurE compare
MMP_RS08720 -2.1 -1.5 4Fe-4S binding protein compare
MMP_RS02900 -2.1 -0.5 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS01365 -2.1 -3.8 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS00985 -2.1 -4.4 CDC48 family AAA ATPase compare
MMP_RS04585 -2.1 -9.8 AIR synthase related protein compare
MMP_RS03025 -2.1 -5.3 molybdenum cofactor guanylyltransferase compare
MMP_RS07185 -2.1 -9.8 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS01445 -2.1 -6.5 hypothetical protein compare
MMP_RS04850 -2.1 -13.8 UPF0254 family protein compare
MMP_RS03435 -2.1 -1.4 ketol-acid reductoisomerase compare
MMP_RS06630 -2.1 -0.8 UPF0058 family protein compare
MMP_RS01830 -2.1 -1.5 tRNA-Val compare
MMP_RS04870 -2.0 -4.3 TIGR02253 family HAD-type hydrolase compare
MMP_RS02145 -2.0 -7.4 winged helix-turn-helix transcriptional regulator compare
MMP_RS07605 -2.0 -3.6 diadenylate cyclase compare
MMP_RS04790 -2.0 -11.9 4-hydroxy-tetrahydrodipicolinate reductase compare
MMP_RS03205 -2.0 -1.5 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS07700 -2.0 -9.4 DUF1188 domain-containing protein compare
MMP_RS08210 -2.0 -2.2 phosphatidylglycerophosphatase A compare
MMP_RS03600 -2.0 -1.9 triose-phosphate isomerase compare
MMP_RS07630 -1.9 -1.1 ATP-binding cassette domain-containing protein compare
MMP_RS07200 -1.9 -5.7 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS00115 -1.9 -9.9 radical SAM protein compare
MMP_RS08855 -1.9 -9.0 hypothetical protein compare
MMP_RS02240 -1.9 -2.4 methanogenesis marker 7 protein compare
MMP_RS00035 -1.9 -9.1 DUF2098 family protein compare
MMP_RS08705 -1.9 -7.8 sulfopyruvate decarboxylase subunit beta compare
MMP_RS06925 -1.9 -2.6 ribonuclease VapC4 compare
MMP_RS06725 -1.9 -8.9 hypothetical protein compare
MMP_RS03755 -1.9 -10.2 MarR family transcriptional regulator compare
MMP_RS01610 -1.9 -2.9 hypothetical protein compare
MMP_RS04955 -1.9 -5.5 DNA topoisomerase I compare
MMP_RS00315 -1.9 -5.2 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS07820 -1.9 -4.5 UPF0104 family protein compare
MMP_RS01545 -1.9 -0.9 CBS domain-containing protein compare
MMP_RS07695 -1.9 -4.4 DUF3236 domain-containing protein compare
MMP_RS00520 -1.9 -1.7 RNA polymerase Rpb4 family protein compare
MMP_RS06540 -1.9 -2.4 3-methyl-2-oxobutanoate dehydrogenase subunit VorB compare
MMP_RS07415 -1.8 -5.6 molybdopterin-guanine dinucleotide biosynthesis protein MobB compare
MMP_RS06625 -1.8 -1.3 DNA primase compare
MMP_RS05500 -1.8 -7.7 2-isopropylmalate synthase compare
MMP_RS08615 -1.8 -1.9 flagellar protein G compare
MMP_RS06395 -1.8 -2.9 ThiF family adenylyltransferase compare
MMP_RS05515 -1.7 -5.4 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS00915 -1.7 -4.6 DUF116 domain-containing protein compare
MMP_RS07385 -1.7 -2.5 protein translocase SEC61 complex subunit gamma compare
MMP_RS03315 -1.7 -1.1 ferrous iron transport protein A compare
MMP_RS06355 -1.7 -2.0 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS07445 -1.7 -7.9 helix-turn-helix domain-containing protein compare
MMP_RS01570 -1.7 -1.2 hypothetical protein compare
MMP_RS05550 -1.7 -0.6 cation:proton antiporter compare
MMP_RS03450 -1.7 -2.1 glycine synthesis protein GlyXS (from data) compare
MMP_RS06290 -1.7 -3.2 DNA repair and recombination protein RadA compare
MMP_RS03090 -1.7 -4.7 cation:proton antiporter compare
MMP_RS07955 -1.7 -5.0 FumA C-terminus/TtdB family hydratase beta subunit compare
MMP_RS00310 -1.7 -6.4 CBS domain-containing protein compare
MMP_RS00855 -1.7 -4.9 DUF367 family protein compare
MMP_RS06325 -1.7 -1.1 hypothetical protein compare
MMP_RS03700 -1.6 -5.2 sodium:proton antiporter compare
MMP_RS06120 -1.6 -1.8 UPF0147 family protein compare
MMP_RS05535 -1.6 -5.2 hypothetical protein compare
MMP_RS02800 -1.6 -5.0 nucleotidyltransferase domain-containing protein compare
MMP_RS02195 -1.6 -2.3 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS03035 -1.6 -2.6 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS05295 -1.6 -8.2 minichromosome maintenance protein MCM compare
MMP_RS07380 -1.6 -1.7 transcription elongation factor Spt5 compare
MMP_RS06020 -1.6 -3.7 archaeoflavoprotein AfpA compare
MMP_RS02175 -1.5 -0.7 DUF1611 domain-containing protein compare
MMP_RS00515 -1.5 -0.7 DUF655 domain-containing protein compare
MMP_RS03015 -1.5 -4.3 GTP 3' 8-cyclase MoaA compare
MMP_RS02110 -1.5 -1.9 hypothetical protein compare
MMP_RS03535 -1.5 -2.7 helix-turn-helix transcriptional regulator compare
MMP_RS01840 -1.5 -4.0 TIGR00289 family protein compare
MMP_RS01250 -1.5 -3.1 tRNA (guanine(26)-N(2))-dimethyltransferase compare
MMP_RS08645 -1.5 -6.3 UPF0179 family protein compare
MMP_RS02130 -1.5 -5.1 zinc metalloprotease HtpX compare
MMP_RS06295 -1.5 -5.0 methanogenesis marker 14 protein compare
MMP_RS03960 -1.5 -1.2 hypothetical protein compare
MMP_RS01755 -1.4 -0.8 DUF2097 domain-containing protein compare
MMP_RS03020 -1.4 -4.8 peptidylprolyl isomerase compare
MMP_RS08570 -1.4 -5.3 coenzyme F420-0:L-glutamate ligase compare
MMP_RS07755 -1.4 -1.1 DUF555 domain-containing protein compare
MMP_RS06475 -1.4 -3.3 FAD-dependent oxidoreductase compare
MMP_RS08660 -1.4 -4.5 DHH family phosphoesterase compare
MMP_RS08215 -1.4 -2.7 DUF483 domain-containing protein compare
MMP_RS05250 -1.4 -0.9 NFYB/HAP3 family transcription factor subunit compare
MMP_RS03485 -1.4 -3.8 TIGR00267 family protein compare
MMP_RS03580 -1.4 -2.2 signal recognition particle-docking protein FtsY compare
MMP_RS03550 -1.4 -1.4 DUF2124 domain-containing protein compare
MMP_RS02345 -1.4 -2.1 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS01885 -1.4 -6.3 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS07355 -1.4 -0.6 transcription factor S compare
MMP_RS01325 -1.4 -1.7 dihydroneopterin aldolase family protein compare
MMP_RS03245 -1.3 -3.9 DNA repair and recombination protein RadB compare
MMP_RS01900 -1.3 -8.7 hypothetical protein compare
MMP_RS01775 -1.3 -1.2 TIGR00297 family protein compare
MMP_RS06400 -1.3 -1.0 4Fe-4S binding protein compare
MMP_RS05430 -1.3 -3.9 TIGR00288 family NYN domain-containing protein compare
MMP_RS00305 -1.3 -1.2 phosphoribosyl-ATP diphosphatase compare
MMP_RS05975 -1.3 -1.0 hypothetical protein compare
MMP_RS08435 -1.3 -1.7 Era-like GTP-binding protein compare
MMP_RS02245 -1.3 -2.1 hypothetical protein compare
MMP_RS02415 -1.3 -1.1 site-specific integrase compare
MMP_RS00905 -1.3 -2.3 phenylacetate--CoA ligase compare
MMP_RS07535 -1.3 -5.3 4Fe-4S binding protein compare
MMP_RS04685 -1.2 -2.0 DUF126 domain-containing protein compare
MMP_RS01795 -1.2 -0.9 methanogenesis marker 6 protein compare
MMP_RS05540 -1.2 -2.8 hypothetical protein compare
MMP_RS05930 -1.2 -1.4 3-isopropylmalate dehydratase large subunit compare
MMP_RS01240 -1.2 -1.3 7-cyano-7-deazaguanine synthase QueC compare
MMP_RS01800 -1.2 -2.3 TIGR00303 family protein compare
MMP_RS04500 -1.2 -7.7 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS08100 -1.2 -4.1 8-amino-7-oxononanoate synthase compare
MMP_RS06335 -1.2 -2.1 HAD family hydrolase compare
MMP_RS01265 -1.2 -1.8 hypothetical protein compare
MMP_RS04780 -1.2 -2.0 ribonuclease P compare
MMP_RS04090 -1.2 -1.4 hypothetical protein compare
MMP_RS02895 -1.2 -4.0 DHH family phosphoesterase compare
MMP_RS07075 -1.2 -2.7 phosphomannomutase/phosphoglucomutase compare
MMP_RS04145 -1.2 -1.1 hypothetical protein compare
MMP_RS06350 -1.2 -2.7 HesA/MoeB/ThiF family protein compare
MMP_RS03640 -1.1 -2.0 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS01525 -1.1 -1.3 nucleoside-diphosphate kinase compare
MMP_RS03340 -1.1 -0.6 ABC transporter ATP-binding protein compare
MMP_RS08155 -1.1 -4.6 hypothetical protein compare
MMP_RS01960 -1.1 -0.4 hypothetical protein compare
MMP_RS06990 -1.1 -2.3 CatB-related O-acetyltransferase compare
MMP_RS01875 -1.1 -5.8 N-acetyltransferase compare
MMP_RS05800 -1.1 -5.1 B12-binding domain-containing radical SAM protein compare
MMP_RS07090 -1.1 -5.1 tRNA (adenine-N1)-methyltransferase compare
MMP_RS03400 -1.1 -1.8 archease compare
MMP_RS08350 -1.1 -0.6 hypothetical protein compare
MMP_RS03490 -1.1 -1.1 DUF2115 domain-containing protein compare
MMP_RS00720 -1.1 -3.6 metal-dependent hydrolase compare
MMP_RS04610 -1.1 -2.2 Dabb family protein compare
MMP_RS05640 -1.1 -4.0 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS00345 -1.1 -2.9 DUF2666 domain-containing protein compare
MMP_RS01665 -1.1 -2.3 DUF2111 domain-containing protein compare
MMP_RS01880 -1.0 -3.9 DegT/DnrJ/EryC1/StrS family aminotransferase compare


Specific Phenotypes

For 10 genes in this experiment

For nitrogen source Uridine in Methanococcus maripaludis S2

For nitrogen source Uridine across organisms