Experiment set10S178 for Methanococcus maripaludis S2

Compare to:

H2 N-free with 2mM Adenine hydrochloride hydrate

200 most important genes:

  gene name fitness t score description  
MMP_RS08715 -5.6 -3.0 formylmethanofuran dehydrogenase subunit B compare
MMP_RS01500 -5.4 -3.3 CBS domain-containing protein compare
MMP_RS01175 -5.2 -4.7 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS01545 -4.9 -1.4 CBS domain-containing protein compare
MMP_RS06400 -4.9 -2.5 4Fe-4S binding protein compare
MMP_RS03450 -4.8 -3.9 glycine synthesis protein GlyXS (from data) compare
MMP_RS03435 -4.8 -3.2 ketol-acid reductoisomerase compare
MMP_RS03035 -4.6 -6.4 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS06355 -4.5 -5.1 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS08720 -4.5 -2.6 4Fe-4S binding protein compare
MMP_RS07345 -4.5 -11.2 glycine synthesis protein GlyXL (from data) compare
MMP_RS07955 -4.5 -6.9 FumA C-terminus/TtdB family hydratase beta subunit compare
MMP_RS07185 -4.4 -14.8 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS03315 -4.4 -2.1 ferrous iron transport protein A compare
MMP_RS05515 -4.2 -8.6 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS04710 -4.2 -2.9 hypothetical protein compare
MMP_RS05500 -4.2 -9.7 2-isopropylmalate synthase compare
MMP_RS00750 -4.1 -3.8 fumarate hydratase compare
MMP_RS05265 -4.1 -3.7 2-isopropylmalate synthase compare
MMP_RS05250 -4.1 -2.6 NFYB/HAP3 family transcription factor subunit compare
MMP_RS02010 -4.0 -14.5 PHP domain-containing protein compare
MMP_RS07845 -4.0 -3.4 LL-diaminopimelate aminotransferase compare
MMP_RS03015 -3.9 -12.8 GTP 3' 8-cyclase MoaA compare
MMP_RS04455 -3.8 -23.8 nitrogenase subunit alpha compare
MMP_RS04470 -3.8 -22.9 nitrogenase compare
MMP_RS02675 -3.8 -4.9 hypothetical protein compare
MMP_RS04465 -3.8 -20.9 nitrogenase iron-molybdenum cofactor biosynthesis protein NifE compare
MMP_RS04890 -3.8 -1.6 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS07730 -3.8 -3.2 pyruvate synthase subunit beta compare
MMP_RS07635 -3.7 -9.0 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS04450 -3.7 -16.1 P-II family nitrogen regulator compare
MMP_RS07525 -3.7 -9.6 4Fe-4S binding protein compare
MMP_RS00555 -3.7 -8.7 MFS transporter compare
MMP_RS04440 -3.6 -15.5 nitrogenase iron protein compare
MMP_RS06350 -3.6 -9.3 HesA/MoeB/ThiF family protein compare
MMP_RS02670 -3.6 -21.7 ATP-binding cassette domain-containing protein compare
MMP_RS01005 -3.6 -2.1 riboflavin synthase compare
MMP_RS02145 -3.6 -10.9 winged helix-turn-helix transcriptional regulator compare
MMP_RS07365 -3.6 -13.4 2-phosphoglycerate kinase compare
MMP_RS04460 -3.5 -23.1 nitrogenase molybdenum-iron protein subunit beta compare
MMP_RS02685 -3.5 -16.9 molybdate ABC transporter substrate-binding protein compare
MMP_RS04445 -3.4 -12.2 P-II family nitrogen regulator compare
MMP_RS08165 -3.3 -4.5 phosphoglycerate dehydrogenase compare
MMP_RS03700 -3.3 -12.4 sodium:proton antiporter compare
MMP_RS05930 -3.3 -3.2 3-isopropylmalate dehydratase large subunit compare
MMP_RS03640 -3.2 -6.2 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS06295 -3.2 -8.7 methanogenesis marker 14 protein compare
MMP_RS02680 -3.2 -11.5 ABC transporter permease compare
MMP_RS04790 -3.2 -13.5 4-hydroxy-tetrahydrodipicolinate reductase compare
MMP_RS08650 -3.2 -4.5 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS06730 -3.2 -2.2 phosphopantothenate/pantothenate synthetase compare
MMP_RS07445 -3.2 -8.8 helix-turn-helix domain-containing protein compare
MMP_RS00305 -3.1 -2.4 phosphoribosyl-ATP diphosphatase compare
MMP_RS07390 -3.1 -4.5 cell division protein FtsZ compare
MMP_RS01455 -3.1 -8.2 nickel pincer cofactor biosynthesis protein LarC compare
MMP_RS06020 -3.0 -5.5 archaeoflavoprotein AfpA compare
MMP_RS06395 -3.0 -4.6 ThiF family adenylyltransferase compare
MMP_RS01325 -3.0 -3.9 dihydroneopterin aldolase family protein compare
MMP_RS05920 -3.0 -0.9 50S ribosomal protein L37e compare
MMP_RS01830 -3.0 -2.9 tRNA-Val compare
MMP_RS00040 -3.0 -6.5 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS06475 -3.0 -6.8 FAD-dependent oxidoreductase compare
MMP_RS01385 -3.0 -1.0 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS02240 -3.0 -4.9 methanogenesis marker 7 protein compare
MMP_RS01445 -2.9 -10.7 hypothetical protein compare
MMP_RS04850 -2.9 -21.9 UPF0254 family protein compare
MMP_RS03025 -2.9 -7.6 molybdenum cofactor guanylyltransferase compare
MMP_RS07695 -2.9 -9.0 DUF3236 domain-containing protein compare
MMP_RS07435 -2.9 -2.6 GMP synthase subunit A compare
MMP_RS07555 -2.8 -1.4 monovalent cation/H+ antiporter subunit E compare
MMP_RS07755 -2.8 -2.1 DUF555 domain-containing protein compare
MMP_RS00455 -2.8 -14.4 orotate phosphoribosyltransferase-like protein compare
MMP_RS06625 -2.8 -2.8 DNA primase compare
MMP_RS07600 -2.8 -3.4 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS07605 -2.7 -5.4 diadenylate cyclase compare
MMP_RS03485 -2.7 -5.7 TIGR00267 family protein compare
MMP_RS08500 -2.7 -7.7 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMP_RS07710 -2.7 -10.7 cell division protein FtsZ compare
MMP_RS04780 -2.7 -5.7 ribonuclease P compare
MMP_RS01610 -2.7 -4.4 hypothetical protein compare
MMP_RS04090 -2.7 -4.6 hypothetical protein compare
MMP_RS01180 -2.6 -2.2 XTP/dITP diphosphatase compare
MMP_RS00725 -2.6 -8.9 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS07075 -2.6 -7.7 phosphomannomutase/phosphoglucomutase compare
MMP_RS00730 -2.6 -9.8 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS02800 -2.6 -6.2 nucleotidyltransferase domain-containing protein compare
MMP_RS00735 -2.6 -5.4 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS00915 -2.5 -9.8 DUF116 domain-containing protein compare
MMP_RS01755 -2.5 -2.0 DUF2097 domain-containing protein compare
MMP_RS07700 -2.5 -10.7 DUF1188 domain-containing protein compare
MMP_RS03960 -2.5 -2.5 hypothetical protein compare
MMP_RS03110 -2.5 -6.6 glycosyltransferase family 2 protein compare
MMP_RS01265 -2.5 -2.8 hypothetical protein compare
MMP_RS04685 -2.5 -3.1 DUF126 domain-containing protein compare
MMP_RS05430 -2.5 -6.5 TIGR00288 family NYN domain-containing protein compare
MMP_RS04615 -2.5 -5.4 PDGLE domain-containing protein compare
MMP_RS01225 -2.4 -6.1 DUF5379 domain-containing protein compare
MMP_RS00810 -2.4 -9.0 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS00685 -2.4 -4.5 2-phospho-L-lactate guanylyltransferase compare
MMP_RS06285 -2.4 -4.1 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS01700 -2.4 -1.2 dihydroxy-acid dehydratase compare
MMP_RS07090 -2.4 -12.7 tRNA (adenine-N1)-methyltransferase compare
MMP_RS06270 -2.4 -5.1 TIGR00300 family protein compare
MMP_RS00315 -2.4 -7.2 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS02355 -2.3 -4.9 30S ribosomal protein S27ae compare
MMP_RS01380 -2.3 -6.6 PHP domain-containing protein compare
MMP_RS01800 -2.3 -4.4 TIGR00303 family protein compare
MMP_RS08635 -2.3 -2.0 UbiA family prenyltransferase compare
MMP_RS07380 -2.3 -2.8 transcription elongation factor Spt5 compare
MMP_RS02345 -2.3 -4.4 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS08645 -2.3 -9.3 UPF0179 family protein compare
MMP_RS08435 -2.3 -3.5 Era-like GTP-binding protein compare
MMP_RS04605 -2.3 -5.3 cobalt ECF transporter T component CbiQ compare
MMP_RS04955 -2.3 -7.1 DNA topoisomerase I compare
MMP_RS06370 -2.3 -6.5 biotin synthase BioB compare
MMP_RS01020 -2.2 -1.8 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS03205 -2.2 -2.2 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS04215 -2.2 -7.3 nickel pincer cofactor biosynthesis protein LarB compare
MMP_RS06315 -2.2 -1.4 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS04500 -2.2 -14.1 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS06105 -2.2 -8.8 hydrogenase maturation peptidase HycI compare
MMP_RS01220 -2.2 -8.5 hypothetical protein compare
MMP_RS00300 -2.2 -1.0 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS00310 -2.2 -8.4 CBS domain-containing protein compare
MMP_RS08790 -2.2 -2.7 translation initiation factor IF-2 subunit alpha compare
MMP_RS06855 -2.2 -9.8 hypothetical protein compare
MMP_RS08860 -2.2 -5.9 MinD/ParA family protein compare
MMP_RS02730 -2.1 -8.8 ModD protein compare
MMP_RS03580 -2.1 -3.9 signal recognition particle-docking protein FtsY compare
MMP_RS03390 -2.1 -7.7 malate dehydrogenase compare
MMP_RS01875 -2.1 -11.5 N-acetyltransferase compare
MMP_RS02195 -2.1 -4.9 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS04585 -2.1 -10.7 AIR synthase related protein compare
MMP_RS08195 -2.1 -11.2 hypothetical protein compare
MMP_RS05765 -2.1 -6.0 M42 family metallopeptidase compare
MMP_RS05425 -2.1 -6.1 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS00985 -2.1 -7.4 CDC48 family AAA ATPase compare
MMP_RS08745 -2.1 -6.1 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS02135 -2.1 -6.1 DUF5612 domain-containing protein compare
MMP_RS05550 -2.1 -1.1 cation:proton antiporter compare
MMP_RS05640 -2.1 -8.2 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS01880 -2.1 -8.0 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS08095 -2.0 -7.8 dethiobiotin synthase compare
MMP_RS06375 -2.0 -6.0 ATP-dependent sacrificial sulfur transferase LarE compare
MMP_RS05925 -2.0 -5.0 small nuclear ribonucleoprotein compare
MMP_RS08300 -2.0 -1.3 metal-sulfur cluster assembly factor compare
MMP_RS06120 -2.0 -2.9 UPF0147 family protein compare
MMP_RS07575 -1.9 -4.0 RNA ligase partner protein compare
MMP_RS07355 -1.9 -1.2 transcription factor S compare
MMP_RS01890 -1.9 -5.4 nucleotide sugar dehydrogenase compare
MMP_RS00895 -1.9 -5.5 hypothetical protein compare
MMP_RS07630 -1.9 -1.7 ATP-binding cassette domain-containing protein compare
MMP_RS07200 -1.9 -6.0 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS08210 -1.9 -2.0 phosphatidylglycerophosphatase A compare
MMP_RS01885 -1.9 -8.1 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS07420 -1.9 -5.6 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS01365 -1.9 -3.2 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS08440 -1.9 -3.1 cell division protein SepF compare
MMP_RS09020 -1.9 -2.5 hypothetical protein compare
MMP_RS04620 -1.9 -8.8 cobalt transporter CbiM compare
MMP_RS07860 -1.8 -1.4 hypothetical protein compare
MMP_RS06670 -1.8 -5.6 glucose-6-phosphate isomerase compare
MMP_RS07705 -1.8 -9.0 transcriptional regulator compare
MMP_RS05845 -1.8 -2.1 tRNA-intron lyase compare
MMP_RS07750 -1.8 -5.4 DUF357 domain-containing protein compare
MMP_RS01725 -1.8 -6.1 class I SAM-dependent methyltransferase family protein compare
MMP_RS06725 -1.8 -10.1 hypothetical protein compare
MMP_RS01925 -1.8 -9.5 DUF1616 domain-containing protein compare
MMP_RS02245 -1.8 -3.4 hypothetical protein compare
MMP_RS01335 -1.7 -3.2 prefoldin subunit beta compare
MMP_RS01900 -1.7 -12.1 hypothetical protein compare
MMP_RS03535 -1.7 -2.5 helix-turn-helix transcriptional regulator compare
MMP_RS03445 -1.7 -1.3 methanogenesis marker 17 protein compare
MMP_RS08100 -1.7 -6.6 8-amino-7-oxononanoate synthase compare
MMP_RS07535 -1.7 -7.7 4Fe-4S binding protein compare
MMP_RS00900 -1.7 -2.4 50S ribosomal protein L39e compare
MMP_RS02780 -1.7 -6.9 hypothetical protein compare
MMP_RS06895 -1.7 -2.4 selenocysteine-specific translation elongation factor compare
MMP_RS06975 -1.7 -3.1 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS07330 -1.7 -13.6 membrane protein compare
MMP_RS00035 -1.6 -5.9 DUF2098 family protein compare
MMP_RS07005 -1.6 -0.7 4Fe-4S binding protein compare
MMP_RS03600 -1.6 -2.0 triose-phosphate isomerase compare
MMP_RS08330 -1.6 -6.9 NADH-quinone oxidoreductase subunit H compare
MMP_RS08155 -1.6 -6.2 hypothetical protein compare
MMP_RS02175 -1.6 -1.2 DUF1611 domain-containing protein compare
MMP_RS05555 -1.5 -1.5 DUF4040 domain-containing protein compare
MMP_RS03080 -1.5 -2.8 universal stress protein compare
MMP_RS08105 -1.5 -5.8 6-carboxyhexanoate--CoA ligase compare
MMP_RS06630 -1.5 -1.0 UPF0058 family protein compare
MMP_RS04875 -1.4 -6.1 energy-converting hydrogenase B subunit P compare
MMP_RS05875 -1.4 -4.2 hydroxyethylthiazole kinase compare
MMP_RS00720 -1.4 -5.7 metal-dependent hydrolase compare
MMP_RS05280 -1.4 -7.2 COG1361 S-layer family protein compare
MMP_RS06885 -1.4 -2.8 50S ribosome-binding GTPase compare
MMP_RS05540 -1.4 -2.4 hypothetical protein compare
MMP_RS08570 -1.4 -7.0 coenzyme F420-0:L-glutamate ligase compare
MMP_RS03400 -1.4 -3.3 archease compare
MMP_RS07645 -1.4 -5.7 aldehyde dehydrogenase family protein compare
MMP_RS06980 -1.4 -5.8 tRNA 2-thiocytidine biosynthesis TtcA family protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in nitrogen source experiments

For nitrogen source Adenine hydrochloride hydrate across organisms