Experiment set10S174 for Methanococcus maripaludis S2

Compare to:

H2 N-free with 10mM N-Acetyl-D-Glucosamine

200 most important genes:

  gene name fitness t score description  
MMP_RS07345 -3.6 -8.4 glycine synthesis protein GlyXL (from data) compare
MMP_RS07555 -3.3 -0.8 monovalent cation/H+ antiporter subunit E compare
MMP_RS08165 -3.2 -2.5 phosphoglycerate dehydrogenase compare
MMP_RS03340 -3.2 -1.0 ABC transporter ATP-binding protein compare
MMP_RS06400 -3.1 -1.8 4Fe-4S binding protein compare
MMP_RS01500 -3.0 -2.6 CBS domain-containing protein compare
MMP_RS08350 -2.9 -0.9 hypothetical protein compare
MMP_RS01005 -2.9 -1.3 riboflavin synthase compare
MMP_RS03700 -2.9 -9.8 sodium:proton antiporter compare
MMP_RS04445 -2.9 -10.2 P-II family nitrogen regulator compare
MMP_RS00725 -2.9 -9.4 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS01380 -2.9 -5.2 PHP domain-containing protein compare
MMP_RS02010 -2.8 -11.9 PHP domain-containing protein compare
MMP_RS04440 -2.8 -13.1 nitrogenase iron protein compare
MMP_RS03960 -2.8 -1.6 hypothetical protein compare
MMP_RS04470 -2.8 -17.3 nitrogenase compare
MMP_RS04460 -2.8 -18.9 nitrogenase molybdenum-iron protein subunit beta compare
MMP_RS04450 -2.7 -12.9 P-II family nitrogen regulator compare
MMP_RS04455 -2.7 -20.6 nitrogenase subunit alpha compare
MMP_RS00555 -2.7 -8.5 MFS transporter compare
MMP_RS04465 -2.7 -16.6 nitrogenase iron-molybdenum cofactor biosynthesis protein NifE compare
MMP_RS07955 -2.7 -5.9 FumA C-terminus/TtdB family hydratase beta subunit compare
MMP_RS02145 -2.7 -9.9 winged helix-turn-helix transcriptional regulator compare
MMP_RS03300 -2.7 -0.9 TOBE domain-containing protein compare
MMP_RS01175 -2.6 -4.8 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS00455 -2.6 -10.5 orotate phosphoribosyltransferase-like protein compare
MMP_RS05425 -2.6 -4.5 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS02685 -2.6 -10.9 molybdate ABC transporter substrate-binding protein compare
MMP_RS07845 -2.6 -2.3 LL-diaminopimelate aminotransferase compare
MMP_RS01925 -2.6 -12.5 DUF1616 domain-containing protein compare
MMP_RS04215 -2.6 -10.2 nickel pincer cofactor biosynthesis protein LarB compare
MMP_RS07635 -2.6 -7.3 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS02670 -2.6 -12.9 ATP-binding cassette domain-containing protein compare
MMP_RS01795 -2.6 -1.4 methanogenesis marker 6 protein compare
MMP_RS00730 -2.6 -5.9 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS01180 -2.6 -2.3 XTP/dITP diphosphatase compare
MMP_RS07755 -2.6 -1.2 DUF555 domain-containing protein compare
MMP_RS05265 -2.5 -2.3 2-isopropylmalate synthase compare
MMP_RS06175 -2.5 -6.8 winged helix-turn-helix transcriptional regulator compare
MMP_RS01610 -2.5 -3.4 hypothetical protein compare
MMP_RS03020 -2.5 -6.5 peptidylprolyl isomerase compare
MMP_RS03390 -2.5 -8.1 malate dehydrogenase compare
MMP_RS00300 -2.4 -0.7 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS08370 -2.4 -0.7 cation:proton antiporter subunit C compare
MMP_RS06600 -2.4 -1.2 class III signal peptide-containing protein compare
MMP_RS04850 -2.4 -16.0 UPF0254 family protein compare
MMP_RS08100 -2.4 -6.9 8-amino-7-oxononanoate synthase compare
MMP_RS02730 -2.4 -9.7 ModD protein compare
MMP_RS01700 -2.3 -0.7 dihydroxy-acid dehydratase compare
MMP_RS06295 -2.3 -8.2 methanogenesis marker 14 protein compare
MMP_RS06730 -2.3 -1.3 phosphopantothenate/pantothenate synthetase compare
MMP_RS07435 -2.3 -1.9 GMP synthase subunit A compare
MMP_RS07075 -2.3 -5.3 phosphomannomutase/phosphoglucomutase compare
MMP_RS05500 -2.3 -9.8 2-isopropylmalate synthase compare
MMP_RS08195 -2.3 -9.8 hypothetical protein compare
MMP_RS03600 -2.3 -2.0 triose-phosphate isomerase compare
MMP_RS06395 -2.3 -3.5 ThiF family adenylyltransferase compare
MMP_RS03025 -2.3 -4.7 molybdenum cofactor guanylyltransferase compare
MMP_RS05250 -2.3 -1.5 NFYB/HAP3 family transcription factor subunit compare
MMP_RS01900 -2.3 -15.1 hypothetical protein compare
MMP_RS03450 -2.3 -2.5 glycine synthesis protein GlyXS (from data) compare
MMP_RS01455 -2.3 -8.6 nickel pincer cofactor biosynthesis protein LarC compare
MMP_RS02195 -2.2 -3.4 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS06725 -2.2 -11.1 hypothetical protein compare
MMP_RS02245 -2.2 -3.4 hypothetical protein compare
MMP_RS01885 -2.2 -9.2 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS03445 -2.2 -0.9 methanogenesis marker 17 protein compare
MMP_RS04500 -2.2 -13.6 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS03035 -2.2 -3.6 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS08095 -2.2 -6.1 dethiobiotin synthase compare
MMP_RS03435 -2.2 -2.0 ketol-acid reductoisomerase compare
MMP_RS02240 -2.2 -3.1 methanogenesis marker 7 protein compare
MMP_RS07445 -2.2 -8.5 helix-turn-helix domain-containing protein compare
MMP_RS02800 -2.2 -7.3 nucleotidyltransferase domain-containing protein compare
MMP_RS08715 -2.2 -1.9 formylmethanofuran dehydrogenase subunit B compare
MMP_RS00040 -2.2 -7.2 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS02680 -2.2 -5.9 ABC transporter permease compare
MMP_RS08860 -2.2 -4.5 MinD/ParA family protein compare
MMP_RS01830 -2.1 -1.7 tRNA-Val compare
MMP_RS01940 -2.1 -4.5 MoxR family ATPase compare
MMP_RS08650 -2.1 -3.7 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS00735 -2.1 -3.5 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS00685 -2.1 -3.1 2-phospho-L-lactate guanylyltransferase compare
MMP_RS09020 -2.1 -1.2 hypothetical protein compare
MMP_RS03315 -2.1 -1.3 ferrous iron transport protein A compare
MMP_RS05550 -2.1 -0.7 cation:proton antiporter compare
MMP_RS03535 -2.1 -3.1 helix-turn-helix transcriptional regulator compare
MMP_RS02165 -2.1 -9.3 tRNA-dihydrouridine synthase compare
MMP_RS07605 -2.1 -3.9 diadenylate cyclase compare
MMP_RS00520 -2.1 -1.9 RNA polymerase Rpb4 family protein compare
MMP_RS01970 -2.1 -13.4 TIGR04279 domain-containing protein compare
MMP_RS04890 -2.0 -1.0 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS03485 -2.0 -5.8 TIGR00267 family protein compare
MMP_RS06285 -2.0 -2.1 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS02110 -2.0 -2.2 hypothetical protein compare
MMP_RS02355 -2.0 -3.2 30S ribosomal protein S27ae compare
MMP_RS07600 -2.0 -2.2 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS01975 -2.0 -13.9 hypothetical protein compare
MMP_RS07365 -2.0 -10.3 2-phosphoglycerate kinase compare
MMP_RS07700 -2.0 -10.7 DUF1188 domain-containing protein compare
MMP_RS01220 -2.0 -7.7 hypothetical protein compare
MMP_RS06270 -2.0 -5.2 TIGR00300 family protein compare
MMP_RS02675 -2.0 -3.2 hypothetical protein compare
MMP_RS00315 -2.0 -5.9 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS08500 -1.9 -4.4 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMP_RS05930 -1.9 -1.9 3-isopropylmalate dehydratase large subunit compare
MMP_RS06475 -1.9 -4.6 FAD-dependent oxidoreductase compare
MMP_RS08720 -1.9 -1.4 4Fe-4S binding protein compare
MMP_RS01955 -1.9 -2.9 hypothetical protein compare
MMP_RS08645 -1.9 -6.8 UPF0179 family protein compare
MMP_RS03580 -1.9 -3.7 signal recognition particle-docking protein FtsY compare
MMP_RS00750 -1.9 -2.0 fumarate hydratase compare
MMP_RS04955 -1.9 -6.6 DNA topoisomerase I compare
MMP_RS01755 -1.9 -0.8 DUF2097 domain-containing protein compare
MMP_RS00810 -1.9 -8.0 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS08210 -1.9 -1.9 phosphatidylglycerophosphatase A compare
MMP_RS06355 -1.9 -2.3 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS02280 -1.8 -0.7 DUF211 domain-containing protein compare
MMP_RS01225 -1.8 -5.4 DUF5379 domain-containing protein compare
MMP_RS04090 -1.8 -2.4 hypothetical protein compare
MMP_RS04685 -1.8 -2.5 DUF126 domain-containing protein compare
MMP_RS07695 -1.8 -6.1 DUF3236 domain-containing protein compare
MMP_RS07710 -1.8 -6.0 cell division protein FtsZ compare
MMP_RS08745 -1.8 -4.3 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS08330 -1.8 -6.3 NADH-quinone oxidoreductase subunit H compare
MMP_RS00310 -1.8 -7.5 CBS domain-containing protein compare
MMP_RS04710 -1.8 -1.6 hypothetical protein compare
MMP_RS06120 -1.8 -1.9 UPF0147 family protein compare
MMP_RS05835 -1.8 -0.9 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMP_RS06840 -1.8 -0.8 DNA-directed RNA polymerase subunit N compare
MMP_RS01020 -1.8 -1.0 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS08635 -1.8 -1.6 UbiA family prenyltransferase compare
MMP_RS04780 -1.7 -2.8 ribonuclease P compare
MMP_RS01445 -1.7 -4.8 hypothetical protein compare
MMP_RS07525 -1.7 -8.3 4Fe-4S binding protein compare
MMP_RS01800 -1.7 -3.1 TIGR00303 family protein compare
MMP_RS02900 -1.7 -0.5 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS07185 -1.7 -9.2 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS05640 -1.7 -6.0 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS05540 -1.7 -3.0 hypothetical protein compare
MMP_RS01325 -1.7 -2.0 dihydroneopterin aldolase family protein compare
MMP_RS08705 -1.7 -5.4 sulfopyruvate decarboxylase subunit beta compare
MMP_RS02135 -1.7 -4.0 DUF5612 domain-containing protein compare
MMP_RS03465 -1.6 -1.1 adenine phosphoribosyltransferase compare
MMP_RS06630 -1.6 -0.8 UPF0058 family protein compare
MMP_RS07380 -1.6 -1.7 transcription elongation factor Spt5 compare
MMP_RS04015 -1.6 -2.0 hypothetical protein compare
MMP_RS07200 -1.6 -5.6 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS06375 -1.6 -5.0 ATP-dependent sacrificial sulfur transferase LarE compare
MMP_RS05925 -1.6 -2.9 small nuclear ribonucleoprotein compare
MMP_RS02955 -1.6 -2.6 DJ-1/PfpI family protein compare
MMP_RS08300 -1.6 -0.7 metal-sulfur cluster assembly factor compare
MMP_RS07355 -1.6 -0.6 transcription factor S compare
MMP_RS03110 -1.6 -4.2 glycosyltransferase family 2 protein compare
MMP_RS06370 -1.6 -3.8 biotin synthase BioB compare
MMP_RS01875 -1.5 -5.8 N-acetyltransferase compare
MMP_RS08790 -1.5 -1.5 translation initiation factor IF-2 subunit alpha compare
MMP_RS01945 -1.5 -5.7 DUF4350 domain-containing protein compare
MMP_RS08105 -1.5 -4.7 6-carboxyhexanoate--CoA ligase compare
MMP_RS06445 -1.5 -3.2 DUF89 domain-containing protein compare
MMP_RS04585 -1.5 -6.9 AIR synthase related protein compare
MMP_RS07390 -1.5 -1.8 cell division protein FtsZ compare
MMP_RS06670 -1.5 -3.5 glucose-6-phosphate isomerase compare
MMP_RS06975 -1.5 -1.4 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS02175 -1.5 -0.7 DUF1611 domain-containing protein compare
MMP_RS02875 -1.5 -6.3 chorismate pyruvate-lyase family protein compare
MMP_RS05430 -1.5 -6.3 TIGR00288 family NYN domain-containing protein compare
MMP_RS06625 -1.4 -1.8 DNA primase compare
MMP_RS06020 -1.4 -3.3 archaeoflavoprotein AfpA compare
MMP_RS08570 -1.4 -6.3 coenzyme F420-0:L-glutamate ligase compare
MMP_RS01495 -1.4 -5.6 TraB/GumN family protein compare
MMP_RS08225 -1.4 -6.1 RimK family alpha-L-glutamate ligase compare
MMP_RS06310 -1.4 -3.7 NAD(P)/FAD-dependent oxidoreductase compare
MMP_RS02340 -1.4 -1.6 DNA-directed RNA polymerase subunit E'' compare
MMP_RS05765 -1.4 -3.9 M42 family metallopeptidase compare
MMP_RS01905 -1.4 -8.2 glycosyltransferase compare
MMP_RS04690 -1.4 -2.6 class III signal peptide-containing protein compare
MMP_RS01935 -1.4 -6.8 DUF58 domain-containing protein compare
MMP_RS05675 -1.4 -1.4 phosphate ABC transporter ATP-binding protein PstB compare
MMP_RS06895 -1.4 -1.4 selenocysteine-specific translation elongation factor compare
MMP_RS08660 -1.4 -5.6 DHH family phosphoesterase compare
MMP_RS08435 -1.4 -1.6 Era-like GTP-binding protein compare
MMP_RS04775 -1.3 -2.1 adenosylhomocysteinase compare
MMP_RS00035 -1.3 -5.6 DUF2098 family protein compare
MMP_RS07535 -1.3 -6.4 4Fe-4S binding protein compare
MMP_RS02130 -1.3 -6.1 zinc metalloprotease HtpX compare
MMP_RS07645 -1.3 -4.0 aldehyde dehydrogenase family protein compare
MMP_RS08595 -1.3 -0.9 flagellar protein C compare
MMP_RS05515 -1.3 -2.8 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS01545 -1.3 -0.7 CBS domain-containing protein compare
MMP_RS05950 -1.3 -5.7 nickel-dependent hydrogenase large subunit compare
MMP_RS04870 -1.3 -3.4 TIGR02253 family HAD-type hydrolase compare
MMP_RS06925 -1.3 -1.8 ribonuclease VapC4 compare
MMP_RS06315 -1.3 -0.6 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS03205 -1.3 -1.2 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS00720 -1.2 -4.1 metal-dependent hydrolase compare
MMP_RS08335 -1.2 -4.7 NADH-quinone oxidoreductase subunit B family protein compare
MMP_RS01540 -1.2 -2.1 DUF504 domain-containing protein compare
MMP_RS06325 -1.2 -1.0 hypothetical protein compare
MMP_RS06855 -1.2 -6.4 hypothetical protein compare


Specific Phenotypes

For 6 genes in this experiment

For nitrogen source N-Acetyl-D-Glucosamine in Methanococcus maripaludis S2

For nitrogen source N-Acetyl-D-Glucosamine across organisms