Experiment set10S169 for Methanococcus maripaludis S2

Compare to:

H2 N-free with 10mM L-Citrulline

200 most detrimental genes:

  gene name fitness t score description  
MMP_RS02885 +2.7 15.9 molybdopterin biosynthesis protein compare
MMP_RS08320 +2.6 8.1 molybdopterin molybdotransferase MoeA compare
MMP_RS06720 +1.9 8.5 response regulator transcription factor compare
MMP_RS06715 +1.8 11.0 cache domain-containing protein compare
MMP_RS04885 +1.7 9.5 sulfite exporter TauE/SafE family protein compare
MMP_RS07765 +1.4 8.6 sodium:alanine symporter family protein compare
MMP_RS02290 +1.4 7.6 MBL fold metallo-hydrolase compare
MMP_RS06870 +1.4 3.5 DedA family protein compare
MMP_RS05975 +1.4 2.2 hypothetical protein compare
MMP_RS02045 +1.3 2.2 tRNA-Met compare
MMP_RS00325 +1.2 2.0 RNA-binding protein compare
MMP_RS02605 +1.2 1.0 MotA/TolQ/ExbB proton channel family protein compare
MMP_RS01570 +1.2 1.7 hypothetical protein compare
MMP_RS08310 +1.1 2.1 TMEM165/GDT1 family protein compare
MMP_RS00185 +1.0 7.4 potassium channel protein compare
MMP_RS01100 +1.0 1.7 ABC transporter ATP-binding protein compare
MMP_RS01495 +1.0 4.3 TraB/GumN family protein compare
MMP_RS00130 +1.0 1.2 nickel-responsive transcriptional regulator NikR compare
MMP_RS05695 +0.9 4.4 phospholipase D-like domain-containing protein compare
MMP_RS06685 +0.9 5.0 formate dehydrogenase H subunit alpha selenocysteine-containing compare
MMP_RS03220 +0.9 2.5 RNA 2' 3'-cyclic phosphodiesterase compare
MMP_RS00295 +0.9 2.0 gamma carbonic anhydrase family protein compare
MMP_RS05795 +0.9 2.1 redox-regulated ATPase YchF compare
MMP_RS00345 +0.9 1.9 DUF2666 domain-containing protein compare
MMP_RS06905 +0.9 1.3 hypothetical protein compare
MMP_RS08760 +0.8 2.8 hypothetical protein compare
MMP_RS08930 +0.8 1.4 hypothetical protein compare
MMP_RS08260 +0.8 2.6 DUF99 family protein compare
MMP_RS07840 +0.8 1.6 ribonuclease III compare
MMP_RS06345 +0.8 4.0 formate dehydrogenase accessory sulfurtransferase FdhD compare
MMP_RS00395 +0.8 1.2 MGMT family protein compare
MMP_RS03340 +0.8 0.8 ABC transporter ATP-binding protein compare
MMP_RS00430 +0.8 1.7 hypothetical protein compare
MMP_RS07095 +0.8 2.1 PspC domain-containing protein compare
MMP_RS05110 +0.8 2.9 16S ribosomal RNA methyltransferase A compare
MMP_RS00650 +0.8 3.6 ABC transporter ATP-binding protein compare
MMP_RS00660 +0.8 4.9 alkaline phosphatase family protein compare
MMP_RS00375 +0.8 4.0 ammonium transporter compare
MMP_RS06075 +0.8 3.3 class I SAM-dependent methyltransferase compare
MMP_RS00855 +0.7 3.1 DUF367 family protein compare
MMP_RS06545 +0.7 2.1 ferredoxin family protein compare
MMP_RS01620 +0.7 2.5 hypothetical protein compare
MMP_RS06540 +0.7 1.5 3-methyl-2-oxobutanoate dehydrogenase subunit VorB compare
MMP_RS07815 +0.7 0.9 DUF2120 domain-containing protein compare
MMP_RS02300 +0.7 2.5 NAD(P)H-dependent oxidoreductase compare
MMP_RS01550 +0.7 2.4 DUF1624 domain-containing protein compare
MMP_RS01135 +0.7 4.0 molybdate ABC transporter substrate-binding protein compare
MMP_RS03150 +0.7 3.6 phosphoglycerate mutase compare
MMP_RS07835 +0.7 2.0 TldD/PmbA family protein compare
MMP_RS00290 +0.7 2.8 hypothetical protein compare
MMP_RS02915 +0.7 1.5 amino acid ABC transporter permease compare
MMP_RS08775 +0.7 2.4 methanogenesis marker 9 domain-containing protein compare
MMP_RS08275 +0.7 2.9 hypothetical protein compare
MMP_RS08555 +0.7 1.8 hypothetical protein compare
MMP_RS07560 +0.7 2.1 prefoldin subunit alpha compare
MMP_RS01630 +0.6 3.0 N-glycosylase/DNA lyase compare
MMP_RS02390 +0.6 2.4 NifB/NifX family molybdenum-iron cluster-binding protein compare
MMP_RS08160 +0.6 2.2 EamA family transporter compare
MMP_RS05720 +0.6 1.4 signal recognition particle subunit SRP19/SEC65 family protein compare
MMP_RS00125 +0.6 0.9 DUF2798 domain-containing protein compare
MMP_RS08390 +0.6 2.5 DUF5400 domain-containing protein compare
MMP_RS08235 +0.6 2.5 hypothetical protein compare
MMP_RS05675 +0.6 1.1 phosphate ABC transporter ATP-binding protein PstB compare
MMP_RS03740 +0.6 2.3 indolepyruvate oxidoreductase subunit beta compare
MMP_RS08600 +0.6 1.4 flagellar protein D compare
MMP_RS00155 +0.6 1.8 heavy metal-binding domain-containing protein compare
MMP_RS05090 +0.6 2.5 CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta compare
MMP_RS00655 +0.6 1.6 hypothetical protein compare
MMP_RS02740 +0.6 1.8 hypothetical protein compare
MMP_RS07890 +0.6 1.2 OB-fold nucleic acid binding domain-containing protein compare
MMP_RS07915 +0.6 2.4 DUF4870 domain-containing protein compare
MMP_RS06705 +0.6 2.1 formate/nitrite transporter family protein compare
MMP_RS05170 +0.6 2.7 lysine exporter LysO family protein compare
MMP_RS08340 +0.6 1.6 4Fe-4S binding protein compare
MMP_RS04145 +0.6 1.0 hypothetical protein compare
MMP_RS01145 +0.6 2.1 ABC transporter ATP-binding protein compare
MMP_RS08430 +0.6 1.4 HAD family hydrolase compare
MMP_RS08485 +0.5 2.9 tungstate ABC transporter substrate-binding protein WtpA compare
MMP_RS04060 +0.5 1.6 hypothetical protein compare
MMP_RS01415 +0.5 1.3 DUF2067 domain-containing protein compare
MMP_RS01320 +0.5 1.4 hypothetical protein compare
MMP_RS04635 +0.5 2.7 GNAT family N-acetyltransferase compare
MMP_RS06500 +0.5 3.5 ATP-binding protein compare
MMP_RS04945 +0.5 2.4 hypothetical protein compare
MMP_RS05365 +0.5 1.2 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
MMP_RS01160 +0.5 2.3 DMT family transporter compare
MMP_RS08725 +0.5 0.5 Ni/Fe hydrogenase subunit alpha compare
MMP_RS07650 +0.5 3.0 TldD/PmbA family protein compare
MMP_RS05780 +0.5 2.6 multidrug resistance efflux transporter family protein compare
MMP_RS08365 +0.5 1.6 energy conserving hydrogenase EhbF compare
MMP_RS01675 +0.5 0.7 hypothetical protein compare
MMP_RS00450 +0.5 0.8 4Fe-4S binding protein compare
MMP_RS01985 +0.5 1.8 F420-dependent methylenetetrahydromethanopterin dehydrogenase compare
MMP_RS08415 +0.5 1.3 radical SAM protein compare
MMP_RS00990 +0.5 1.0 hypothetical protein compare
MMP_RS05085 +0.5 1.8 AAA family ATPase compare
MMP_RS01855 +0.5 2.1 2-hydroxyacyl-CoA dehydratase family protein compare
MMP_RS00120 +0.5 1.6 LysR family transcriptional regulator compare
MMP_RS00545 +0.5 1.4 XRE family transcriptional regulator compare
MMP_RS02375 +0.5 2.7 hypothetical protein compare
MMP_RS06570 +0.5 1.8 DUF190 domain-containing protein compare
MMP_RS08265 +0.5 2.0 rubrerythrin compare
MMP_RS01055 +0.5 1.2 hypothetical protein compare
MMP_RS00675 +0.5 0.5 nitroreductase family protein compare
MMP_RS06590 +0.5 1.4 GNAT family N-acetyltransferase compare
MMP_RS04800 +0.5 2.1 chemotaxis protein CheW compare
MMP_RS00085 +0.5 2.4 DNA cytosine methyltransferase compare
MMP_RS08890 +0.5 3.0 glycosyltransferase family 4 protein compare
MMP_RS07125 +0.5 1.4 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS00800 +0.5 2.6 Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain compare
MMP_RS08285 +0.5 2.2 serine/threonine protein kinase compare
MMP_RS08835 +0.5 2.3 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein compare
MMP_RS07350 +0.5 0.9 preprotein translocase subunit Sec61beta compare
MMP_RS04315 +0.5 2.1 corrinoid protein compare
MMP_RS07960 +0.4 1.9 sugar phosphate isomerase/epimerase compare
MMP_RS04595 +0.4 1.5 hypothetical protein compare
MMP_RS08075 +0.4 1.2 DUF749 domain-containing protein compare
MMP_RS07800 +0.4 1.9 ATP-binding cassette domain-containing protein compare
MMP_RS08380 +0.4 1.7 phosphatase PAP2 family protein compare
MMP_RS01200 +0.4 1.2 hypothetical protein compare
MMP_RS06520 +0.4 1.6 DUF1786 domain-containing protein compare
MMP_RS04985 +0.4 1.5 DUF2180 family protein compare
MMP_RS08670 +0.4 1.5 metallophosphoesterase compare
MMP_RS02370 +0.4 1.3 NifB/NifX family molybdenum-iron cluster-binding protein compare
MMP_RS08675 +0.4 0.9 class III signal peptide-containing protein compare
MMP_RS00880 +0.4 1.5 ribosome assembly RNA-binding protein YhbY compare
MMP_RS04190 +0.4 2.2 hypothetical protein compare
MMP_RS04205 +0.4 2.3 carboxymuconolactone decarboxylase family protein compare
MMP_RS06650 +0.4 1.8 glycoside hydrolase family 57 protein compare
MMP_RS06910 +0.4 2.0 RlmF-related methyltransferase compare
MMP_RS01645 +0.4 1.0 SWIM zinc finger family protein compare
MMP_RS08280 +0.4 1.1 proteasome assembly chaperone family protein compare
MMP_RS00700 +0.4 1.3 OB-fold nucleic acid binding domain-containing protein compare
MMP_RS03575 +0.4 2.3 ECF transporter S component compare
MMP_RS03910 +0.4 0.6 hypothetical protein compare
MMP_RS01210 +0.4 1.9 sodium:solute symporter compare
MMP_RS06745 +0.4 1.3 DUF2119 domain-containing protein compare
MMP_RS03675 +0.4 2.7 RimK family alpha-L-glutamate ligase compare
MMP_RS00665 +0.4 1.2 hypothetical protein compare
MMP_RS05470 +0.4 1.9 DUF523 and DUF1722 domain-containing protein compare
MMP_RS07770 +0.4 1.4 alanine racemase compare
MMP_RS08640 +0.4 2.7 TIM barrel protein compare
MMP_RS07985 +0.4 2.3 nitroreductase family protein compare
MMP_RS05130 +0.4 2.7 DUF2226 domain-containing protein compare
MMP_RS06440 +0.4 1.6 CBS domain-containing protein compare
MMP_RS01120 +0.4 1.5 permease compare
MMP_RS03215 +0.4 2.2 MBL fold metallo-hydrolase compare
MMP_RS00195 +0.4 3.1 DUF4013 domain-containing protein compare
MMP_RS01640 +0.4 1.9 2-oxoacid:acceptor oxidoreductase subunit alpha compare
MMP_RS08205 +0.4 1.8 stage II sporulation protein M compare
MMP_RS00960 +0.4 0.7 iron export ABC transporter permease subunit FetB compare
MMP_RS08410 +0.4 1.2 DUF169 domain-containing protein compare
MMP_RS00975 +0.4 1.9 HD domain-containing protein compare
MMP_RS04405 +0.4 1.7 hypothetical protein compare
MMP_RS05235 +0.4 1.6 exodeoxyribonuclease III compare
MMP_RS06300 +0.4 1.5 ABC transporter substrate-binding protein compare
MMP_RS06215 +0.4 0.5 30S ribosomal protein S6e compare
MMP_RS06250 +0.4 1.5 hypothetical protein compare
MMP_RS08070 +0.4 1.2 DUF2096 domain-containing protein compare
MMP_RS01260 +0.4 1.1 HDIG domain-containing protein compare
MMP_RS02500 +0.3 0.9 minichromosome maintenance protein MCM compare
MMP_RS09065 +0.3 2.1 hypothetical protein compare
MMP_RS01525 +0.3 0.7 nucleoside-diphosphate kinase compare
MMP_RS02645 +0.3 1.6 ArsR family transcriptional regulator compare
MMP_RS01280 +0.3 2.5 DUF515 domain-containing protein compare
MMP_RS00955 +0.3 1.8 coenzyme gamma-F420-2:alpha-L-glutamate ligase compare
MMP_RS08445 +0.3 1.1 DUF2099 family protein compare
MMP_RS01635 +0.3 1.2 thiamine pyrophosphate-dependent enzyme compare
MMP_RS01785 +0.3 1.4 hypothetical protein compare
MMP_RS08490 +0.3 2.2 hypothetical protein compare
MMP_RS07805 +0.3 1.8 ABC transporter permease compare
MMP_RS06490 +0.3 1.0 hypothetical protein compare
MMP_RS03065 +0.3 0.9 AzlC family ABC transporter permease compare
MMP_RS01150 +0.3 1.1 aldo/keto reductase compare
MMP_RS07590 +0.3 1.6 hypothetical protein compare
MMP_RS05825 +0.3 0.8 peptidyl-prolyl cis-trans isomerase compare
MMP_RS06320 +0.3 1.2 hypothetical protein compare
MMP_RS08085 +0.3 2.0 hypothetical protein compare
MMP_RS07850 +0.3 0.8 prephenate dehydratase compare
MMP_RS06305 +0.3 1.3 transporter substrate-binding domain-containing protein compare
MMP_RS05315 +0.3 0.6 hypothetical protein compare
MMP_RS06050 +0.3 1.3 ZIP family metal transporter compare
MMP_RS01060 +0.3 1.7 calcium/sodium antiporter compare
MMP_RS02410 +0.3 0.7 ABC transporter substrate-binding protein compare
MMP_RS06065 +0.3 2.2 iron ABC transporter substrate-binding protein compare
MMP_RS05715 +0.3 1.0 hypothetical protein compare
MMP_RS06700 +0.3 1.6 hypothetical protein compare
MMP_RS06430 +0.3 1.4 6-carboxytetrahydropterin synthase QueD compare
MMP_RS06000 +0.3 1.4 divalent-cation tolerance protein CutA compare
MMP_RS01435 +0.3 0.7 DMT family transporter compare
MMP_RS07150 +0.3 1.0 MTH895/ArsE family thioredoxin-like protein compare
MMP_RS06660 +0.3 1.4 glycosyltransferase family 4 protein compare
MMP_RS01660 +0.3 0.6 hypothetical protein compare
MMP_RS01685 +0.3 0.8 indolepyruvate oxidoreductase subunit beta compare
MMP_RS07100 +0.3 1.3 hypothetical protein compare
MMP_RS00980 +0.3 1.4 hypothetical protein compare
MMP_RS06190 +0.3 1.6 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO compare
MMP_RS01065 +0.3 1.8 alpha/beta hydrolase compare
MMP_RS02805 +0.3 0.4 HEPN domain-containing protein compare
MMP_RS03130 +0.3 1.3 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in nitrogen source experiments

For nitrogen source L-Citrulline across organisms