Experiment set10S163 for Methanococcus maripaludis S2

Compare to:

H2 N-free with 10mM L-tyrosine disodium salt

200 most important genes:

  gene name fitness t score description  
MMP_RS02280 -3.9 -0.7 DUF211 domain-containing protein compare
MMP_RS08715 -2.3 -1.7 formylmethanofuran dehydrogenase subunit B compare
MMP_RS03960 -2.0 -1.3 hypothetical protein compare
MMP_RS07555 -2.0 -0.7 monovalent cation/H+ antiporter subunit E compare
MMP_RS03445 -1.9 -0.8 methanogenesis marker 17 protein compare
MMP_RS00130 -1.6 -0.9 nickel-responsive transcriptional regulator NikR compare
MMP_RS01570 -1.6 -1.0 hypothetical protein compare
MMP_RS03535 -1.5 -2.3 helix-turn-helix transcriptional regulator compare
MMP_RS04445 -1.4 -5.7 P-II family nitrogen regulator compare
MMP_RS01800 -1.4 -2.7 TIGR00303 family protein compare
MMP_RS07390 -1.4 -1.5 cell division protein FtsZ compare
MMP_RS01175 -1.3 -3.4 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS01380 -1.3 -3.0 PHP domain-containing protein compare
MMP_RS01325 -1.3 -1.4 dihydroneopterin aldolase family protein compare
MMP_RS01180 -1.3 -1.5 XTP/dITP diphosphatase compare
MMP_RS00905 -1.3 -3.2 phenylacetate--CoA ligase compare
MMP_RS07860 -1.3 -0.7 hypothetical protein compare
MMP_RS00520 -1.3 -1.3 RNA polymerase Rpb4 family protein compare
MMP_RS06355 -1.3 -2.0 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS06020 -1.3 -3.0 archaeoflavoprotein AfpA compare
MMP_RS08720 -1.2 -1.0 4Fe-4S binding protein compare
MMP_RS06120 -1.2 -1.2 UPF0147 family protein compare
MMP_RS05985 -1.2 -2.4 hypothetical protein compare
MMP_RS04055 -1.2 -1.1 hypothetical protein compare
MMP_RS06400 -1.2 -1.1 4Fe-4S binding protein compare
MMP_RS07635 -1.2 -4.7 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS08860 -1.2 -3.5 MinD/ParA family protein compare
MMP_RS00725 -1.2 -4.7 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS03015 -1.1 -5.5 GTP 3' 8-cyclase MoaA compare
MMP_RS00705 -1.1 -1.0 hypothetical protein compare
MMP_RS02340 -1.1 -1.3 DNA-directed RNA polymerase subunit E'' compare
MMP_RS02010 -1.1 -4.8 PHP domain-containing protein compare
MMP_RS06325 -1.1 -0.8 hypothetical protein compare
MMP_RS09020 -1.1 -0.9 hypothetical protein compare
MMP_RS02110 -1.1 -1.3 hypothetical protein compare
MMP_RS01500 -1.1 -1.6 CBS domain-containing protein compare
MMP_RS02805 -1.1 -0.8 HEPN domain-containing protein compare
MMP_RS05850 -1.1 -2.4 Ldh family oxidoreductase compare
MMP_RS01020 -1.1 -0.7 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS01250 -1.1 -1.8 tRNA (guanine(26)-N(2))-dimethyltransferase compare
MMP_RS02355 -1.1 -1.8 30S ribosomal protein S27ae compare
MMP_RS04455 -1.1 -8.0 nitrogenase subunit alpha compare
MMP_RS04015 -1.0 -1.8 hypothetical protein compare
MMP_RS04955 -1.0 -3.6 DNA topoisomerase I compare
MMP_RS00730 -1.0 -2.9 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS08650 -1.0 -2.2 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS07575 -1.0 -2.1 RNA ligase partner protein compare
MMP_RS08660 -1.0 -5.5 DHH family phosphoesterase compare
MMP_RS03025 -1.0 -2.5 molybdenum cofactor guanylyltransferase compare
MMP_RS00060 -1.0 -1.3 3-dehydroquinate synthase II compare
MMP_RS06035 -1.0 -4.9 glycosyltransferase family 2 protein compare
MMP_RS05515 -1.0 -3.7 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS01885 -1.0 -5.1 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS00685 -1.0 -2.2 2-phospho-L-lactate guanylyltransferase compare
MMP_RS08165 -1.0 -1.3 phosphoglycerate dehydrogenase compare
MMP_RS01195 -1.0 -0.6 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS07355 -1.0 -0.4 transcription factor S compare
MMP_RS01220 -0.9 -3.9 hypothetical protein compare
MMP_RS00120 -0.9 -2.8 LysR family transcriptional regulator compare
MMP_RS01745 -0.9 -3.5 AMP phosphorylase compare
MMP_RS04890 -0.9 -0.6 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS05635 -0.9 -2.9 NAD-dependent epimerase/dehydratase family protein compare
MMP_RS00655 -0.9 -1.5 hypothetical protein compare
MMP_RS01285 -0.9 -4.7 hypothetical protein compare
MMP_RS06015 -0.9 -3.5 flavodoxin family protein compare
MMP_RS02145 -0.9 -4.3 winged helix-turn-helix transcriptional regulator compare
MMP_RS08675 -0.9 -1.4 class III signal peptide-containing protein compare
MMP_RS07730 -0.9 -0.8 pyruvate synthase subunit beta compare
MMP_RS06215 -0.9 -1.5 30S ribosomal protein S6e compare
MMP_RS02840 -0.9 -3.7 DUF123 domain-containing protein compare
MMP_RS03315 -0.9 -0.7 ferrous iron transport protein A compare
MMP_RS04460 -0.9 -5.7 nitrogenase molybdenum-iron protein subunit beta compare
MMP_RS00035 -0.9 -5.1 DUF2098 family protein compare
MMP_RS02020 -0.9 -1.9 gamma-glutamylcyclotransferase compare
MMP_RS04465 -0.9 -6.0 nitrogenase iron-molybdenum cofactor biosynthesis protein NifE compare
MMP_RS04440 -0.9 -4.3 nitrogenase iron protein compare
MMP_RS06475 -0.9 -2.3 FAD-dependent oxidoreductase compare
MMP_RS06725 -0.9 -4.6 hypothetical protein compare
MMP_RS06840 -0.9 -0.5 DNA-directed RNA polymerase subunit N compare
MMP_RS02730 -0.9 -4.0 ModD protein compare
MMP_RS04450 -0.9 -5.3 P-II family nitrogen regulator compare
MMP_RS05540 -0.9 -3.2 hypothetical protein compare
MMP_RS05500 -0.9 -3.6 2-isopropylmalate synthase compare
MMP_RS08615 -0.9 -1.1 flagellar protein G compare
MMP_RS03890 -0.9 -3.2 DUF2540 domain-containing protein compare
MMP_RS03700 -0.9 -3.3 sodium:proton antiporter compare
MMP_RS06525 -0.8 -0.7 YciI family protein compare
MMP_RS04470 -0.8 -5.8 nitrogenase compare
MMP_RS05535 -0.8 -3.4 hypothetical protein compare
MMP_RS08350 -0.8 -0.5 hypothetical protein compare
MMP_RS04870 -0.8 -2.6 TIGR02253 family HAD-type hydrolase compare
MMP_RS05695 -0.8 -3.3 phospholipase D-like domain-containing protein compare
MMP_RS01005 -0.8 -0.7 riboflavin synthase compare
MMP_RS02670 -0.8 -4.1 ATP-binding cassette domain-containing protein compare
MMP_RS07700 -0.8 -4.8 DUF1188 domain-containing protein compare
MMP_RS05295 -0.8 -3.3 minichromosome maintenance protein MCM compare
MMP_RS07695 -0.8 -3.3 DUF3236 domain-containing protein compare
MMP_RS04850 -0.8 -6.3 UPF0254 family protein compare
MMP_RS04780 -0.8 -1.3 ribonuclease P compare
MMP_RS00555 -0.8 -3.6 MFS transporter compare
MMP_RS02680 -0.8 -2.5 ABC transporter permease compare
MMP_RS02425 -0.8 -2.4 hypothetical protein compare
MMP_RS06290 -0.8 -1.6 DNA repair and recombination protein RadA compare
MMP_RS08635 -0.8 -0.8 UbiA family prenyltransferase compare
MMP_RS02685 -0.8 -3.6 molybdate ABC transporter substrate-binding protein compare
MMP_RS01225 -0.8 -2.5 DUF5379 domain-containing protein compare
MMP_RS04205 -0.8 -3.1 carboxymuconolactone decarboxylase family protein compare
MMP_RS01830 -0.8 -0.8 tRNA-Val compare
MMP_RS03235 -0.8 -2.8 tRNA pseudouridine(13) synthase TruD compare
MMP_RS08830 -0.8 -3.3 GTP-binding protein compare
MMP_RS01335 -0.8 -1.1 prefoldin subunit beta compare
MMP_RS05020 -0.8 -2.5 hypothetical protein compare
MMP_RS06900 -0.8 -1.5 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS07840 -0.8 -1.1 ribonuclease III compare
MMP_RS01990 -0.7 -1.3 hypothetical protein compare
MMP_RS07710 -0.7 -3.6 cell division protein FtsZ compare
MMP_RS02745 -0.7 -1.2 hypothetical protein compare
MMP_RS04740 -0.7 -2.0 DUF473 domain-containing protein compare
MMP_RS04500 -0.7 -4.2 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS07090 -0.7 -4.5 tRNA (adenine-N1)-methyltransferase compare
MMP_RS07755 -0.7 -0.5 DUF555 domain-containing protein compare
MMP_RS01385 -0.7 -0.3 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS01085 -0.7 -0.9 hypothetical protein compare
MMP_RS03965 -0.7 -1.1 hypothetical protein compare
MMP_RS05285 -0.7 -3.0 MMPL family transporter compare
MMP_RS08100 -0.7 -2.7 8-amino-7-oxononanoate synthase compare
MMP_RS03035 -0.7 -1.5 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS08210 -0.7 -0.8 phosphatidylglycerophosphatase A compare
MMP_RS01805 -0.7 -1.5 NUDIX hydrolase compare
MMP_RS07200 -0.7 -2.0 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS07075 -0.7 -2.0 phosphomannomutase/phosphoglucomutase compare
MMP_RS04775 -0.7 -1.1 adenosylhomocysteinase compare
MMP_RS05555 -0.7 -0.4 DUF4040 domain-containing protein compare
MMP_RS03090 -0.7 -2.8 cation:proton antiporter compare
MMP_RS03485 -0.7 -1.7 TIGR00267 family protein compare
MMP_RS03465 -0.7 -0.5 adenine phosphoribosyltransferase compare
MMP_RS00040 -0.7 -2.2 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS07620 -0.7 -1.8 energy-coupling factor ABC transporter substrate-binding protein compare
MMP_RS05255 -0.7 -4.8 CBS domain-containing protein compare
MMP_RS07895 -0.7 -1.6 cytochrome c compare
MMP_RS05865 -0.7 -1.4 hypothetical protein compare
MMP_RS09035 -0.7 -1.8 hypothetical protein compare
MMP_RS06915 -0.7 -3.1 metallophosphoesterase compare
MMP_RS00315 -0.7 -1.9 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS07525 -0.7 -3.2 4Fe-4S binding protein compare
MMP_RS07750 -0.7 -1.7 DUF357 domain-containing protein compare
MMP_RS02895 -0.7 -3.6 DHH family phosphoesterase compare
MMP_RS03450 -0.7 -0.8 glycine synthesis protein GlyXS (from data) compare
MMP_RS00750 -0.7 -0.9 fumarate hydratase compare
MMP_RS03740 -0.7 -2.4 indolepyruvate oxidoreductase subunit beta compare
MMP_RS06575 -0.7 -1.2 fluoride efflux transporter CrcB compare
MMP_RS07365 -0.7 -3.9 2-phosphoglycerate kinase compare
MMP_RS06895 -0.7 -0.7 selenocysteine-specific translation elongation factor compare
MMP_RS08440 -0.7 -1.2 cell division protein SepF compare
MMP_RS08500 -0.7 -1.5 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMP_RS08370 -0.7 -0.3 cation:proton antiporter subunit C compare
MMP_RS08555 -0.7 -1.4 hypothetical protein compare
MMP_RS02495 -0.7 -1.0 hypothetical protein compare
MMP_RS08855 -0.7 -3.1 hypothetical protein compare
MMP_RS07330 -0.6 -5.1 membrane protein compare
MMP_RS01655 -0.6 -1.4 DsrE family protein compare
MMP_RS00300 -0.6 -0.3 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS01900 -0.6 -4.2 hypothetical protein compare
MMP_RS07445 -0.6 -2.9 helix-turn-helix domain-containing protein compare
MMP_RS06760 -0.6 -1.5 hypothetical protein compare
MMP_RS00635 -0.6 -1.3 energy-coupling factor transporter transmembrane protein EcfT compare
MMP_RS00665 -0.6 -1.5 hypothetical protein compare
MMP_RS00380 -0.6 -2.0 P-II family nitrogen regulator compare
MMP_RS00855 -0.6 -1.8 DUF367 family protein compare
MMP_RS02245 -0.6 -1.2 hypothetical protein compare
MMP_RS04165 -0.6 -1.1 TetR/AcrR family transcriptional regulator compare
MMP_RS08705 -0.6 -2.7 sulfopyruvate decarboxylase subunit beta compare
MMP_RS05925 -0.6 -1.1 small nuclear ribonucleoprotein compare
MMP_RS07530 -0.6 -3.7 4Fe-4S binding protein compare
MMP_RS02415 -0.6 -0.8 site-specific integrase compare
MMP_RS07135 -0.6 -3.1 coenzyme F420 hydrogenase subunit beta compare
MMP_RS05425 -0.6 -1.7 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS00735 -0.6 -1.1 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS06570 -0.6 -1.4 DUF190 domain-containing protein compare
MMP_RS05640 -0.6 -2.7 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS07415 -0.6 -2.8 molybdopterin-guanine dinucleotide biosynthesis protein MobB compare
MMP_RS05580 -0.6 -4.2 glycosyltransferase compare
MMP_RS01925 -0.6 -3.2 DUF1616 domain-containing protein compare
MMP_RS03350 -0.6 -1.2 winged helix-turn-helix domain-containing protein compare
MMP_RS08155 -0.6 -2.7 hypothetical protein compare
MMP_RS08940 -0.6 -0.4 MetS family NSS transporter small subunit compare
MMP_RS05280 -0.6 -2.8 COG1361 S-layer family protein compare
MMP_RS07605 -0.6 -1.2 diadenylate cyclase compare
MMP_RS08760 -0.6 -1.1 hypothetical protein compare
MMP_RS01880 -0.6 -2.2 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS01305 -0.6 -3.4 hypothetical protein compare
MMP_RS00435 -0.6 -2.7 CPBP family intramembrane metalloprotease compare
MMP_RS04615 -0.6 -1.1 PDGLE domain-containing protein compare
MMP_RS05800 -0.5 -2.5 B12-binding domain-containing radical SAM protein compare
MMP_RS04125 -0.5 -1.5 TetR/AcrR family transcriptional regulator compare
MMP_RS08645 -0.5 -2.3 UPF0179 family protein compare
MMP_RS03110 -0.5 -2.0 glycosyltransferase family 2 protein compare
MMP_RS06735 -0.5 -2.0 class I SAM-dependent rRNA methyltransferase compare
MMP_RS05820 -0.5 -2.0 RNA-binding transcriptional accessory protein compare
MMP_RS01125 -0.5 -1.8 thioredoxin family protein compare


Specific Phenotypes

For 1 genes in this experiment

For nitrogen source L-tyrosine disodium salt in Methanococcus maripaludis S2

For nitrogen source L-tyrosine disodium salt across organisms