Experiment set10S156 for Methanococcus maripaludis S2

Compare to:

H2 N-free with 10mM L-Proline

200 most important genes:

  gene name fitness t score description  
MMP_RS03035 -6.4 -3.5 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS06625 -5.5 -2.5 DNA primase compare
MMP_RS01175 -5.0 -4.2 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS07845 -5.0 -2.2 LL-diaminopimelate aminotransferase compare
MMP_RS02685 -4.9 -13.9 molybdate ABC transporter substrate-binding protein compare
MMP_RS07635 -4.9 -9.8 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS04460 -4.8 -21.4 nitrogenase molybdenum-iron protein subunit beta compare
MMP_RS04710 -4.8 -2.0 hypothetical protein compare
MMP_RS04440 -4.8 -11.0 nitrogenase iron protein compare
MMP_RS03960 -4.8 -1.5 hypothetical protein compare
MMP_RS03315 -4.8 -1.6 ferrous iron transport protein A compare
MMP_RS03435 -4.6 -2.0 ketol-acid reductoisomerase compare
MMP_RS04445 -4.6 -9.8 P-II family nitrogen regulator compare
MMP_RS00300 -4.6 -0.6 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS04450 -4.6 -13.4 P-II family nitrogen regulator compare
MMP_RS07345 -4.6 -8.5 glycine synthesis protein GlyXL (from data) compare
MMP_RS01755 -4.4 -0.9 DUF2097 domain-containing protein compare
MMP_RS04465 -4.4 -18.1 nitrogenase iron-molybdenum cofactor biosynthesis protein NifE compare
MMP_RS04455 -4.3 -20.7 nitrogenase subunit alpha compare
MMP_RS02670 -4.3 -15.0 ATP-binding cassette domain-containing protein compare
MMP_RS04890 -4.2 -0.8 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS04470 -4.2 -15.5 nitrogenase compare
MMP_RS02675 -4.2 -3.0 hypothetical protein compare
MMP_RS07730 -4.1 -2.0 pyruvate synthase subunit beta compare
MMP_RS05500 -4.1 -9.0 2-isopropylmalate synthase compare
MMP_RS08300 -4.1 -0.9 metal-sulfur cluster assembly factor compare
MMP_RS04685 -4.0 -3.4 DUF126 domain-containing protein compare
MMP_RS07390 -4.0 -3.1 cell division protein FtsZ compare
MMP_RS07185 -4.0 -14.6 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS02900 -3.9 -0.5 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS03450 -3.9 -2.7 glycine synthesis protein GlyXS (from data) compare
MMP_RS00040 -3.8 -6.8 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS01610 -3.8 -2.9 hypothetical protein compare
MMP_RS06400 -3.8 -1.9 4Fe-4S binding protein compare
MMP_RS08720 -3.7 -1.7 4Fe-4S binding protein compare
MMP_RS07365 -3.7 -14.2 2-phosphoglycerate kinase compare
MMP_RS01545 -3.7 -1.0 CBS domain-containing protein compare
MMP_RS00455 -3.7 -9.6 orotate phosphoribosyltransferase-like protein compare
MMP_RS01500 -3.6 -2.2 CBS domain-containing protein compare
MMP_RS02730 -3.6 -9.6 ModD protein compare
MMP_RS08860 -3.6 -5.6 MinD/ParA family protein compare
MMP_RS00555 -3.6 -7.3 MFS transporter compare
MMP_RS02680 -3.6 -7.6 ABC transporter permease compare
MMP_RS07435 -3.5 -2.1 GMP synthase subunit A compare
MMP_RS01385 -3.4 -0.6 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS02010 -3.4 -11.9 PHP domain-containing protein compare
MMP_RS07525 -3.4 -10.1 4Fe-4S binding protein compare
MMP_RS02145 -3.4 -10.9 winged helix-turn-helix transcriptional regulator compare
MMP_RS07605 -3.4 -4.3 diadenylate cyclase compare
MMP_RS02240 -3.4 -3.6 methanogenesis marker 7 protein compare
MMP_RS03440 -3.2 -1.3 MoaD/ThiS family protein compare
MMP_RS08165 -3.2 -2.5 phosphoglycerate dehydrogenase compare
MMP_RS06630 -3.1 -0.8 UPF0058 family protein compare
MMP_RS00750 -3.1 -2.5 fumarate hydratase compare
MMP_RS08500 -3.1 -6.8 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMP_RS01225 -3.1 -5.9 DUF5379 domain-containing protein compare
MMP_RS08650 -3.1 -4.4 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS05265 -3.1 -2.5 2-isopropylmalate synthase compare
MMP_RS08715 -3.0 -1.8 formylmethanofuran dehydrogenase subunit B compare
MMP_RS06315 -3.0 -0.8 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS07380 -2.9 -2.3 transcription elongation factor Spt5 compare
MMP_RS00985 -2.9 -4.7 CDC48 family AAA ATPase compare
MMP_RS06285 -2.9 -1.9 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS00735 -2.9 -3.4 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS06475 -2.9 -4.3 FAD-dependent oxidoreductase compare
MMP_RS06895 -2.9 -1.9 selenocysteine-specific translation elongation factor compare
MMP_RS02245 -2.9 -3.6 hypothetical protein compare
MMP_RS09020 -2.9 -1.7 hypothetical protein compare
MMP_RS05550 -2.8 -0.7 cation:proton antiporter compare
MMP_RS07200 -2.8 -6.8 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS01830 -2.8 -1.4 tRNA-Val compare
MMP_RS06725 -2.7 -10.9 hypothetical protein compare
MMP_RS07695 -2.7 -8.5 DUF3236 domain-containing protein compare
MMP_RS01005 -2.7 -1.3 riboflavin synthase compare
MMP_RS08855 -2.6 -9.0 hypothetical protein compare
MMP_RS00725 -2.6 -8.1 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS03700 -2.6 -8.4 sodium:proton antiporter compare
MMP_RS08435 -2.6 -2.2 Era-like GTP-binding protein compare
MMP_RS00810 -2.6 -8.3 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS00310 -2.6 -9.1 CBS domain-containing protein compare
MMP_RS04780 -2.6 -3.6 ribonuclease P compare
MMP_RS07700 -2.5 -9.8 DUF1188 domain-containing protein compare
MMP_RS03445 -2.5 -1.0 methanogenesis marker 17 protein compare
MMP_RS02345 -2.5 -3.2 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS04955 -2.5 -7.2 DNA topoisomerase I compare
MMP_RS01085 -2.5 -1.9 hypothetical protein compare
MMP_RS06295 -2.5 -7.4 methanogenesis marker 14 protein compare
MMP_RS00730 -2.5 -5.8 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS01325 -2.5 -1.9 dihydroneopterin aldolase family protein compare
MMP_RS04850 -2.5 -14.6 UPF0254 family protein compare
MMP_RS05430 -2.5 -5.2 TIGR00288 family NYN domain-containing protein compare
MMP_RS03600 -2.4 -2.0 triose-phosphate isomerase compare
MMP_RS07445 -2.4 -4.7 helix-turn-helix domain-containing protein compare
MMP_RS03580 -2.4 -3.3 signal recognition particle-docking protein FtsY compare
MMP_RS06230 -2.3 -2.6 helix-turn-helix domain-containing protein compare
MMP_RS06885 -2.3 -2.7 50S ribosome-binding GTPase compare
MMP_RS04585 -2.3 -10.4 AIR synthase related protein compare
MMP_RS07955 -2.3 -4.1 FumA C-terminus/TtdB family hydratase beta subunit compare
MMP_RS06020 -2.3 -4.8 archaeoflavoprotein AfpA compare
MMP_RS01265 -2.3 -2.0 hypothetical protein compare
MMP_RS04900 -2.2 -14.8 hypothetical protein compare
MMP_RS00915 -2.2 -4.5 DUF116 domain-containing protein compare
MMP_RS03640 -2.2 -2.4 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS08645 -2.2 -8.1 UPF0179 family protein compare
MMP_RS01195 -2.2 -1.1 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS04870 -2.2 -4.9 TIGR02253 family HAD-type hydrolase compare
MMP_RS01380 -2.2 -4.0 PHP domain-containing protein compare
MMP_RS00685 -2.2 -3.2 2-phospho-L-lactate guanylyltransferase compare
MMP_RS01795 -2.2 -1.3 methanogenesis marker 6 protein compare
MMP_RS01440 -2.2 -4.0 NAAT family transporter compare
MMP_RS06855 -2.2 -9.4 hypothetical protein compare
MMP_RS00515 -2.2 -0.8 DUF655 domain-containing protein compare
MMP_RS01800 -2.1 -3.9 TIGR00303 family protein compare
MMP_RS00315 -2.1 -6.6 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS05555 -2.1 -1.1 DUF4040 domain-containing protein compare
MMP_RS01220 -2.1 -7.4 hypothetical protein compare
MMP_RS03025 -2.1 -4.1 molybdenum cofactor guanylyltransferase compare
MMP_RS06395 -2.1 -3.3 ThiF family adenylyltransferase compare
MMP_RS07355 -2.1 -0.7 transcription factor S compare
MMP_RS00305 -2.1 -1.4 phosphoribosyl-ATP diphosphatase compare
MMP_RS03205 -2.0 -1.3 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS05925 -2.0 -2.9 small nuclear ribonucleoprotein compare
MMP_RS01725 -2.0 -3.7 class I SAM-dependent methyltransferase family protein compare
MMP_RS07005 -2.0 -0.5 4Fe-4S binding protein compare
MMP_RS08790 -2.0 -1.7 translation initiation factor IF-2 subunit alpha compare
MMP_RS06730 -2.0 -1.5 phosphopantothenate/pantothenate synthetase compare
MMP_RS05930 -2.0 -1.9 3-isopropylmalate dehydratase large subunit compare
MMP_RS02340 -2.0 -1.5 DNA-directed RNA polymerase subunit E'' compare
MMP_RS01020 -1.9 -1.0 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS07535 -1.9 -7.5 4Fe-4S binding protein compare
MMP_RS06925 -1.9 -2.5 ribonuclease VapC4 compare
MMP_RS07075 -1.9 -3.1 phosphomannomutase/phosphoglucomutase compare
MMP_RS06355 -1.9 -2.0 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS01700 -1.9 -0.7 dihydroxy-acid dehydratase compare
MMP_RS08660 -1.9 -6.5 DHH family phosphoesterase compare
MMP_RS02165 -1.8 -6.2 tRNA-dihydrouridine synthase compare
MMP_RS00320 -1.8 -1.5 class I SAM-dependent methyltransferase compare
MMP_RS08330 -1.8 -5.7 NADH-quinone oxidoreductase subunit H compare
MMP_RS05815 -1.8 -2.0 NOL1/NOP2/sun family putative RNA methylase compare
MMP_RS01445 -1.8 -5.1 hypothetical protein compare
MMP_RS01875 -1.8 -8.7 N-acetyltransferase compare
MMP_RS00110 -1.7 -2.0 hypothetical protein compare
MMP_RS06175 -1.7 -3.9 winged helix-turn-helix transcriptional regulator compare
MMP_RS02780 -1.7 -5.5 hypothetical protein compare
MMP_RS05460 -1.7 -7.7 YcaO-related McrA-glycine thioamidation protein compare
MMP_RS04090 -1.7 -2.2 hypothetical protein compare
MMP_RS06120 -1.7 -1.4 UPF0147 family protein compare
MMP_RS06350 -1.7 -4.5 HesA/MoeB/ThiF family protein compare
MMP_RS01885 -1.7 -6.0 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS02355 -1.7 -2.8 30S ribosomal protein S27ae compare
MMP_RS05540 -1.7 -2.0 hypothetical protein compare
MMP_RS08745 -1.7 -4.6 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS02195 -1.6 -2.9 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS07090 -1.6 -6.9 tRNA (adenine-N1)-methyltransferase compare
MMP_RS08460 -1.6 -2.1 proteasome-activating nucleotidase compare
MMP_RS01375 -1.6 -9.6 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase compare
MMP_RS01880 -1.6 -5.8 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS00035 -1.6 -3.7 DUF2098 family protein compare
MMP_RS06975 -1.6 -1.5 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS08195 -1.5 -6.7 hypothetical protein compare
MMP_RS03020 -1.5 -3.3 peptidylprolyl isomerase compare
MMP_RS02875 -1.5 -6.9 chorismate pyruvate-lyase family protein compare
MMP_RS08570 -1.5 -7.6 coenzyme F420-0:L-glutamate ligase compare
MMP_RS07710 -1.5 -4.5 cell division protein FtsZ compare
MMP_RS01775 -1.5 -1.4 TIGR00297 family protein compare
MMP_RS06970 -1.5 -4.1 ribosomal protein S18-alanine N-acetyltransferase compare
MMP_RS03015 -1.5 -3.6 GTP 3' 8-cyclase MoaA compare
MMP_RS00695 -1.5 -0.5 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS07330 -1.5 -9.8 membrane protein compare
MMP_RS06105 -1.5 -5.6 hydrogenase maturation peptidase HycI compare
MMP_RS05765 -1.5 -3.4 M42 family metallopeptidase compare
MMP_RS01155 -1.5 -5.2 XRE family transcriptional regulator compare
MMP_RS04875 -1.4 -4.3 energy-converting hydrogenase B subunit P compare
MMP_RS08155 -1.4 -4.5 hypothetical protein compare
MMP_RS04605 -1.4 -3.0 cobalt ECF transporter T component CbiQ compare
MMP_RS08785 -1.4 -0.9 RNA-protein complex protein Nop10 compare
MMP_RS09055 -1.4 -0.7 CAP domain-containing protein compare
MMP_RS04790 -1.4 -5.6 4-hydroxy-tetrahydrodipicolinate reductase compare
MMP_RS08635 -1.4 -1.5 UbiA family prenyltransferase compare
MMP_RS05020 -1.4 -2.1 hypothetical protein compare
MMP_RS08210 -1.4 -1.4 phosphatidylglycerophosphatase A compare
MMP_RS03535 -1.4 -1.6 helix-turn-helix transcriptional regulator compare
MMP_RS06015 -1.4 -3.5 flavodoxin family protein compare
MMP_RS03475 -1.3 -0.4 hypothetical protein compare
MMP_RS06340 -1.3 -3.6 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS06670 -1.3 -2.7 glucose-6-phosphate isomerase compare
MMP_RS08940 -1.3 -0.9 MetS family NSS transporter small subunit compare
MMP_RS08705 -1.3 -3.6 sulfopyruvate decarboxylase subunit beta compare
MMP_RS07545 -1.3 -0.8 HTH domain-containing protein compare
MMP_RS05425 -1.3 -3.6 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS07875 -1.3 -3.2 hypothetical protein compare
MMP_RS07575 -1.3 -3.1 RNA ligase partner protein compare
MMP_RS08675 -1.3 -1.4 class III signal peptide-containing protein compare
MMP_RS06900 -1.3 -1.8 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS05440 -1.3 -5.2 winged helix-turn-helix transcriptional regulator compare
MMP_RS01075 -1.2 -1.0 hypothetical protein compare
MMP_RS07180 -1.2 -4.2 DEAD/DEAH box helicase compare
MMP_RS02595 -1.2 -1.0 putative zinc-binding protein compare
MMP_RS03550 -1.2 -0.8 DUF2124 domain-containing protein compare
MMP_RS02800 -1.2 -3.3 nucleotidyltransferase domain-containing protein compare


Specific Phenotypes

For 1 genes in this experiment

For nitrogen source L-Proline in Methanococcus maripaludis S2

For nitrogen source L-Proline across organisms