Experiment set10S151 for Methanococcus maripaludis S2

Compare to:

H2 N-free with 10mM L-Threonine

200 most important genes:

  gene name fitness t score description  
MMP_RS01545 -3.6 -0.7 CBS domain-containing protein compare
MMP_RS01725 -3.6 -3.6 class I SAM-dependent methyltransferase family protein compare
MMP_RS08350 -3.5 -0.7 hypothetical protein compare
MMP_RS01830 -3.3 -0.9 tRNA-Val compare
MMP_RS06625 -3.3 -1.8 DNA primase compare
MMP_RS09055 -3.3 -0.7 CAP domain-containing protein compare
MMP_RS01020 -3.2 -0.9 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS02280 -3.2 -0.6 DUF211 domain-containing protein compare
MMP_RS05925 -2.8 -3.2 small nuclear ribonucleoprotein compare
MMP_RS05835 -2.8 -0.8 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMP_RS07435 -2.8 -1.1 GMP synthase subunit A compare
MMP_RS04445 -2.7 -8.5 P-II family nitrogen regulator compare
MMP_RS08210 -2.7 -1.8 phosphatidylglycerophosphatase A compare
MMP_RS08105 -2.6 -5.6 6-carboxyhexanoate--CoA ligase compare
MMP_RS02730 -2.5 -9.1 ModD protein compare
MMP_RS04450 -2.5 -10.9 P-II family nitrogen regulator compare
MMP_RS00300 -2.5 -0.5 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS02245 -2.4 -2.7 hypothetical protein compare
MMP_RS06400 -2.4 -1.1 4Fe-4S binding protein compare
MMP_RS06350 -2.4 -6.7 HesA/MoeB/ThiF family protein compare
MMP_RS01980 -2.3 -11.0 trimeric intracellular cation channel family protein compare
MMP_RS02675 -2.3 -2.5 hypothetical protein compare
MMP_RS02680 -2.2 -5.8 ABC transporter permease compare
MMP_RS04710 -2.2 -1.5 hypothetical protein compare
MMP_RS03385 -2.2 -1.0 cation diffusion facilitator family transporter compare
MMP_RS01195 -2.2 -1.0 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS04470 -2.1 -11.0 nitrogenase compare
MMP_RS04440 -2.1 -8.3 nitrogenase iron protein compare
MMP_RS04455 -2.1 -13.6 nitrogenase subunit alpha compare
MMP_RS02670 -2.1 -8.7 ATP-binding cassette domain-containing protein compare
MMP_RS05765 -2.1 -5.7 M42 family metallopeptidase compare
MMP_RS02800 -2.1 -7.4 nucleotidyltransferase domain-containing protein compare
MMP_RS07525 -2.0 -5.5 4Fe-4S binding protein compare
MMP_RS04460 -2.0 -11.8 nitrogenase molybdenum-iron protein subunit beta compare
MMP_RS07635 -2.0 -6.7 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS08675 -2.0 -2.0 class III signal peptide-containing protein compare
MMP_RS00735 -2.0 -2.4 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS04890 -2.0 -0.6 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS00915 -2.0 -7.0 DUF116 domain-containing protein compare
MMP_RS04465 -1.9 -10.1 nitrogenase iron-molybdenum cofactor biosynthesis protein NifE compare
MMP_RS08715 -1.9 -1.3 formylmethanofuran dehydrogenase subunit B compare
MMP_RS07645 -1.9 -4.3 aldehyde dehydrogenase family protein compare
MMP_RS03445 -1.9 -0.7 methanogenesis marker 17 protein compare
MMP_RS00040 -1.9 -4.4 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS06295 -1.9 -6.2 methanogenesis marker 14 protein compare
MMP_RS01005 -1.9 -0.9 riboflavin synthase compare
MMP_RS07345 -1.9 -3.5 glycine synthesis protein GlyXL (from data) compare
MMP_RS08860 -1.9 -4.3 MinD/ParA family protein compare
MMP_RS06285 -1.8 -1.6 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS06370 -1.8 -4.0 biotin synthase BioB compare
MMP_RS08745 -1.8 -5.8 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS00555 -1.8 -5.5 MFS transporter compare
MMP_RS01610 -1.8 -2.2 hypothetical protein compare
MMP_RS05020 -1.8 -3.4 hypothetical protein compare
MMP_RS07365 -1.8 -8.1 2-phosphoglycerate kinase compare
MMP_RS05280 -1.8 -7.6 COG1361 S-layer family protein compare
MMP_RS03015 -1.8 -6.6 GTP 3' 8-cyclase MoaA compare
MMP_RS08570 -1.8 -7.2 coenzyme F420-0:L-glutamate ligase compare
MMP_RS04955 -1.8 -5.0 DNA topoisomerase I compare
MMP_RS01220 -1.8 -5.7 hypothetical protein compare
MMP_RS02240 -1.8 -1.8 methanogenesis marker 7 protein compare
MMP_RS05460 -1.8 -6.7 YcaO-related McrA-glycine thioamidation protein compare
MMP_RS02685 -1.8 -6.1 molybdate ABC transporter substrate-binding protein compare
MMP_RS01155 -1.7 -4.8 XRE family transcriptional regulator compare
MMP_RS00895 -1.7 -2.3 hypothetical protein compare
MMP_RS07195 -1.7 -5.6 M20 family metallo-hydrolase compare
MMP_RS07090 -1.7 -6.7 tRNA (adenine-N1)-methyltransferase compare
MMP_RS06630 -1.7 -0.5 UPF0058 family protein compare
MMP_RS04500 -1.7 -8.7 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS07695 -1.7 -5.7 DUF3236 domain-containing protein compare
MMP_RS07860 -1.7 -0.7 hypothetical protein compare
MMP_RS06970 -1.7 -5.2 ribosomal protein S18-alanine N-acetyltransferase compare
MMP_RS04685 -1.7 -1.9 DUF126 domain-containing protein compare
MMP_RS02235 -1.7 -7.8 CBS domain-containing protein compare
MMP_RS08500 -1.6 -3.7 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMP_RS08645 -1.6 -5.9 UPF0179 family protein compare
MMP_RS01335 -1.6 -1.7 prefoldin subunit beta compare
MMP_RS01800 -1.6 -2.2 TIGR00303 family protein compare
MMP_RS08165 -1.6 -1.7 phosphoglycerate dehydrogenase compare
MMP_RS01500 -1.6 -1.9 CBS domain-containing protein compare
MMP_RS02595 -1.6 -1.0 putative zinc-binding protein compare
MMP_RS05430 -1.6 -6.0 TIGR00288 family NYN domain-containing protein compare
MMP_RS03110 -1.6 -4.4 glycosyltransferase family 2 protein compare
MMP_RS06865 -1.6 -2.0 HypC/HybG/HupF family hydrogenase formation chaperone compare
MMP_RS00455 -1.5 -5.8 orotate phosphoribosyltransferase-like protein compare
MMP_RS06035 -1.5 -5.9 glycosyltransferase family 2 protein compare
MMP_RS08100 -1.5 -4.1 8-amino-7-oxononanoate synthase compare
MMP_RS00985 -1.5 -4.0 CDC48 family AAA ATPase compare
MMP_RS00725 -1.5 -5.2 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS00730 -1.5 -3.7 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS08195 -1.5 -4.3 hypothetical protein compare
MMP_RS06375 -1.5 -3.4 ATP-dependent sacrificial sulfur transferase LarE compare
MMP_RS05515 -1.5 -5.0 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS01265 -1.5 -2.0 hypothetical protein compare
MMP_RS04850 -1.5 -7.9 UPF0254 family protein compare
MMP_RS02010 -1.5 -4.8 PHP domain-containing protein compare
MMP_RS03035 -1.5 -2.2 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS06315 -1.5 -0.4 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS01455 -1.5 -3.9 nickel pincer cofactor biosynthesis protein LarC compare
MMP_RS01175 -1.5 -2.3 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS08095 -1.5 -3.3 dethiobiotin synthase compare
MMP_RS05500 -1.4 -4.1 2-isopropylmalate synthase compare
MMP_RS03960 -1.4 -1.1 hypothetical protein compare
MMP_RS03485 -1.4 -2.8 TIGR00267 family protein compare
MMP_RS07075 -1.4 -3.5 phosphomannomutase/phosphoglucomutase compare
MMP_RS04585 -1.4 -7.4 AIR synthase related protein compare
MMP_RS06355 -1.4 -1.7 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS07700 -1.4 -6.1 DUF1188 domain-containing protein compare
MMP_RS05550 -1.4 -0.5 cation:proton antiporter compare
MMP_RS01085 -1.4 -1.3 hypothetical protein compare
MMP_RS01290 -1.4 -6.6 class III signal peptide-containing protein compare
MMP_RS05635 -1.4 -6.3 NAD-dependent epimerase/dehydratase family protein compare
MMP_RS02175 -1.4 -0.6 DUF1611 domain-containing protein compare
MMP_RS07535 -1.4 -5.9 4Fe-4S binding protein compare
MMP_RS06270 -1.4 -3.3 TIGR00300 family protein compare
MMP_RS00315 -1.4 -2.5 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS01285 -1.4 -7.1 hypothetical protein compare
MMP_RS07845 -1.4 -1.5 LL-diaminopimelate aminotransferase compare
MMP_RS04620 -1.4 -7.5 cobalt transporter CbiM compare
MMP_RS06980 -1.4 -4.7 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMP_RS05640 -1.4 -4.3 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS04215 -1.4 -4.7 nickel pincer cofactor biosynthesis protein LarB compare
MMP_RS05440 -1.3 -4.1 winged helix-turn-helix transcriptional regulator compare
MMP_RS01600 -1.3 -2.4 50S ribosomal protein L15e compare
MMP_RS04870 -1.3 -2.5 TIGR02253 family HAD-type hydrolase compare
MMP_RS08790 -1.3 -0.7 translation initiation factor IF-2 subunit alpha compare
MMP_RS01795 -1.3 -0.7 methanogenesis marker 6 protein compare
MMP_RS08855 -1.3 -5.5 hypothetical protein compare
MMP_RS08330 -1.3 -3.4 NADH-quinone oxidoreductase subunit H compare
MMP_RS01305 -1.3 -9.1 hypothetical protein compare
MMP_RS08940 -1.3 -0.8 MetS family NSS transporter small subunit compare
MMP_RS00250 -1.3 -8.6 Flp pilus assembly complex ATPase component TadA compare
MMP_RS00245 -1.2 -8.3 type II secretion system F family protein compare
MMP_RS07335 -1.2 -3.1 tRNA (cytidine(56)-2'-O)-methyltransferase compare
MMP_RS07330 -1.2 -8.6 membrane protein compare
MMP_RS01270 -1.2 -6.2 prepilin peptidase compare
MMP_RS01310 -1.2 -6.9 hypothetical protein compare
MMP_RS01885 -1.2 -4.4 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS07555 -1.2 -0.5 monovalent cation/H+ antiporter subunit E compare
MMP_RS03585 -1.1 -1.8 Hsp20/alpha crystallin family protein compare
MMP_RS06445 -1.1 -2.9 DUF89 domain-containing protein compare
MMP_RS06725 -1.1 -5.5 hypothetical protein compare
MMP_RS06475 -1.1 -3.2 FAD-dependent oxidoreductase compare
MMP_RS01380 -1.1 -2.9 PHP domain-containing protein compare
MMP_RS03555 -1.1 -5.1 transcriptional regulator compare
MMP_RS01370 -1.1 -5.3 acetate--CoA ligase family protein compare
MMP_RS08460 -1.1 -1.1 proteasome-activating nucleotidase compare
MMP_RS05865 -1.1 -1.1 hypothetical protein compare
MMP_RS07445 -1.1 -2.9 helix-turn-helix domain-containing protein compare
MMP_RS08355 -1.1 -2.5 Na(+)/H(+) antiporter subunit B compare
MMP_RS03495 -1.1 -3.7 Na/Pi cotransporter family protein compare
MMP_RS00240 -1.1 -5.5 type II secretion system F family protein compare
MMP_RS07815 -1.1 -0.7 DUF2120 domain-containing protein compare
MMP_RS06670 -1.1 -3.9 glucose-6-phosphate isomerase compare
MMP_RS06395 -1.1 -1.2 ThiF family adenylyltransferase compare
MMP_RS01790 -1.1 -3.2 restriction endonuclease compare
MMP_RS00900 -1.0 -1.1 50S ribosomal protein L39e compare
MMP_RS02345 -1.0 -1.2 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS02780 -1.0 -4.0 hypothetical protein compare
MMP_RS05510 -1.0 -3.6 Rrf2 family transcriptional regulator compare
MMP_RS06940 -1.0 -1.5 polyprenyl diphosphate synthase compare
MMP_RS04780 -1.0 -1.7 ribonuclease P compare
MMP_RS07685 -1.0 -3.5 TIGR01212 family radical SAM protein compare
MMP_RS02145 -1.0 -4.0 winged helix-turn-helix transcriptional regulator compare
MMP_RS04605 -1.0 -1.8 cobalt ECF transporter T component CbiQ compare
MMP_RS08660 -1.0 -4.1 DHH family phosphoesterase compare
MMP_RS07415 -1.0 -2.8 molybdopterin-guanine dinucleotide biosynthesis protein MobB compare
MMP_RS01280 -1.0 -5.2 DUF515 domain-containing protein compare
MMP_RS00810 -1.0 -2.9 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS03755 -1.0 -4.4 MarR family transcriptional regulator compare
MMP_RS02900 -1.0 -0.3 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS04900 -1.0 -5.5 hypothetical protein compare
MMP_RS00125 -1.0 -0.7 DUF2798 domain-containing protein compare
MMP_RS07605 -1.0 -2.2 diadenylate cyclase compare
MMP_RS02985 -1.0 -1.5 hypothetical protein compare
MMP_RS07530 -1.0 -5.3 4Fe-4S binding protein compare
MMP_RS07600 -1.0 -0.9 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS06900 -1.0 -1.7 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS09045 -1.0 -5.9 class III signal peptide-containing protein compare
MMP_RS04125 -1.0 -1.3 TetR/AcrR family transcriptional regulator compare
MMP_RS01295 -1.0 -4.2 hypothetical protein compare
MMP_RS00235 -1.0 -3.3 HDIG domain-containing protein compare
MMP_RS06365 -0.9 -1.2 hypothetical protein compare
MMP_RS00620 -0.9 -2.8 4Fe-4S binding protein compare
MMP_RS01055 -0.9 -1.4 hypothetical protein compare
MMP_RS06120 -0.9 -1.0 UPF0147 family protein compare
MMP_RS03020 -0.9 -2.2 peptidylprolyl isomerase compare
MMP_RS03120 -0.9 -1.8 hypothetical protein compare
MMP_RS06915 -0.9 -1.9 metallophosphoesterase compare
MMP_RS06885 -0.9 -1.2 50S ribosome-binding GTPase compare
MMP_RS03680 -0.9 -3.6 hypothetical protein compare
MMP_RS08930 -0.9 -0.8 hypothetical protein compare
MMP_RS01110 -0.9 -2.1 FmdE family protein compare
MMP_RS00675 -0.9 -0.5 nitroreductase family protein compare
MMP_RS01215 -0.9 -2.7 sodium/proline symporter PutP compare
MMP_RS05580 -0.9 -5.6 glycosyltransferase compare
MMP_RS08615 -0.9 -0.9 flagellar protein G compare
MMP_RS03450 -0.9 -1.0 glycine synthesis protein GlyXS (from data) compare
MMP_RS08280 -0.9 -1.5 proteasome assembly chaperone family protein compare
MMP_RS00310 -0.9 -4.0 CBS domain-containing protein compare


Specific Phenotypes

For 4 genes in this experiment

For nitrogen source L-Threonine in Methanococcus maripaludis S2

For nitrogen source L-Threonine across organisms