Experiment set10S149 for Methanococcus maripaludis S2

Compare to:

H2 N-free with 10mM L-Glutamic acid monopotassium salt monohydrate

200 most important genes:

  gene name fitness t score description  
MMP_RS03960 -6.3 -1.2 hypothetical protein compare
MMP_RS01020 -6.3 -0.8 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS09020 -5.1 -1.6 hypothetical protein compare
MMP_RS08435 -5.1 -2.6 Era-like GTP-binding protein compare
MMP_RS05550 -5.0 -0.7 cation:proton antiporter compare
MMP_RS04710 -5.0 -2.2 hypothetical protein compare
MMP_RS02240 -5.0 -3.6 methanogenesis marker 7 protein compare
MMP_RS02675 -4.9 -3.5 hypothetical protein compare
MMP_RS01795 -4.9 -1.5 methanogenesis marker 6 protein compare
MMP_RS02145 -4.8 -13.4 winged helix-turn-helix transcriptional regulator compare
MMP_RS01830 -4.7 -1.5 tRNA-Val compare
MMP_RS03640 -4.7 -5.0 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS03035 -4.7 -4.8 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS04455 -4.7 -23.0 nitrogenase subunit alpha compare
MMP_RS02670 -4.7 -17.4 ATP-binding cassette domain-containing protein compare
MMP_RS06625 -4.7 -2.4 DNA primase compare
MMP_RS04440 -4.7 -14.0 nitrogenase iron protein compare
MMP_RS04450 -4.7 -17.2 P-II family nitrogen regulator compare
MMP_RS04465 -4.7 -16.9 nitrogenase iron-molybdenum cofactor biosynthesis protein NifE compare
MMP_RS04445 -4.6 -10.3 P-II family nitrogen regulator compare
MMP_RS08165 -4.5 -2.7 phosphoglycerate dehydrogenase compare
MMP_RS02355 -4.5 -2.9 30S ribosomal protein S27ae compare
MMP_RS01385 -4.4 -0.6 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS01325 -4.4 -2.5 dihydroneopterin aldolase family protein compare
MMP_RS04460 -4.4 -25.5 nitrogenase molybdenum-iron protein subunit beta compare
MMP_RS08720 -4.4 -1.6 4Fe-4S binding protein compare
MMP_RS01225 -4.3 -6.4 DUF5379 domain-containing protein compare
MMP_RS04890 -4.3 -0.8 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS02680 -4.3 -7.7 ABC transporter permease compare
MMP_RS04470 -4.3 -22.3 nitrogenase compare
MMP_RS06400 -4.3 -1.7 4Fe-4S binding protein compare
MMP_RS07845 -4.3 -2.5 LL-diaminopimelate aminotransferase compare
MMP_RS07345 -4.3 -8.6 glycine synthesis protein GlyXL (from data) compare
MMP_RS07525 -4.2 -10.8 4Fe-4S binding protein compare
MMP_RS02685 -4.1 -12.3 molybdate ABC transporter substrate-binding protein compare
MMP_RS00810 -4.1 -9.9 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS02730 -4.1 -12.7 ModD protein compare
MMP_RS03435 -4.1 -2.3 ketol-acid reductoisomerase compare
MMP_RS00555 -4.1 -11.1 MFS transporter compare
MMP_RS00040 -4.0 -7.7 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS06895 -4.0 -2.0 selenocysteine-specific translation elongation factor compare
MMP_RS08440 -3.9 -3.2 cell division protein SepF compare
MMP_RS06725 -3.9 -16.8 hypothetical protein compare
MMP_RS08715 -3.9 -2.1 formylmethanofuran dehydrogenase subunit B compare
MMP_RS03450 -3.9 -2.7 glycine synthesis protein GlyXS (from data) compare
MMP_RS07075 -3.9 -6.4 phosphomannomutase/phosphoglucomutase compare
MMP_RS05265 -3.9 -2.4 2-isopropylmalate synthase compare
MMP_RS06120 -3.9 -1.9 UPF0147 family protein compare
MMP_RS05500 -3.8 -10.7 2-isopropylmalate synthase compare
MMP_RS00915 -3.8 -9.1 DUF116 domain-containing protein compare
MMP_RS02010 -3.8 -12.3 PHP domain-containing protein compare
MMP_RS08650 -3.8 -3.8 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS06315 -3.7 -0.7 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS03205 -3.7 -1.8 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS06925 -3.7 -3.1 ribonuclease VapC4 compare
MMP_RS01500 -3.7 -2.9 CBS domain-containing protein compare
MMP_RS07185 -3.7 -16.0 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS07355 -3.6 -0.8 transcription factor S compare
MMP_RS02235 -3.6 -14.7 CBS domain-containing protein compare
MMP_RS06475 -3.6 -5.5 FAD-dependent oxidoreductase compare
MMP_RS04215 -3.6 -11.5 nickel pincer cofactor biosynthesis protein LarB compare
MMP_RS04955 -3.6 -9.3 DNA topoisomerase I compare
MMP_RS01455 -3.6 -8.5 nickel pincer cofactor biosynthesis protein LarC compare
MMP_RS07635 -3.6 -11.0 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS00455 -3.6 -10.7 orotate phosphoribosyltransferase-like protein compare
MMP_RS07605 -3.5 -4.0 diadenylate cyclase compare
MMP_RS04850 -3.5 -21.4 UPF0254 family protein compare
MMP_RS06020 -3.4 -4.9 archaeoflavoprotein AfpA compare
MMP_RS07445 -3.4 -9.1 helix-turn-helix domain-containing protein compare
MMP_RS00725 -3.4 -9.4 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS01175 -3.4 -3.9 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS06270 -3.4 -5.4 TIGR00300 family protein compare
MMP_RS06395 -3.4 -3.9 ThiF family adenylyltransferase compare
MMP_RS00310 -3.4 -11.7 CBS domain-containing protein compare
MMP_RS02800 -3.4 -6.4 nucleotidyltransferase domain-containing protein compare
MMP_RS00735 -3.3 -3.9 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS07380 -3.3 -2.2 transcription elongation factor Spt5 compare
MMP_RS06375 -3.3 -6.8 ATP-dependent sacrificial sulfur transferase LarE compare
MMP_RS07695 -3.3 -8.7 DUF3236 domain-containing protein compare
MMP_RS05845 -3.3 -1.7 tRNA-intron lyase compare
MMP_RS03445 -3.2 -1.1 methanogenesis marker 17 protein compare
MMP_RS04585 -3.2 -13.5 AIR synthase related protein compare
MMP_RS07365 -3.2 -14.2 2-phosphoglycerate kinase compare
MMP_RS03315 -3.2 -1.6 ferrous iron transport protein A compare
MMP_RS07700 -3.2 -12.3 DUF1188 domain-containing protein compare
MMP_RS03580 -3.2 -3.6 signal recognition particle-docking protein FtsY compare
MMP_RS07390 -3.2 -3.2 cell division protein FtsZ compare
MMP_RS02900 -3.1 -0.6 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS01925 -3.1 -11.6 DUF1616 domain-containing protein compare
MMP_RS03110 -3.1 -8.1 glycosyltransferase family 2 protein compare
MMP_RS00985 -3.1 -5.3 CDC48 family AAA ATPase compare
MMP_RS01875 -3.1 -11.5 N-acetyltransferase compare
MMP_RS06885 -3.1 -3.1 50S ribosome-binding GTPase compare
MMP_RS00515 -3.1 -0.8 DUF655 domain-containing protein compare
MMP_RS04720 -3.1 -3.4 DedA family protein compare
MMP_RS05250 -3.0 -1.8 NFYB/HAP3 family transcription factor subunit compare
MMP_RS00730 -3.0 -7.5 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS08300 -3.0 -0.9 metal-sulfur cluster assembly factor compare
MMP_RS02345 -3.0 -4.2 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS01610 -3.0 -3.5 hypothetical protein compare
MMP_RS04790 -3.0 -14.3 4-hydroxy-tetrahydrodipicolinate reductase compare
MMP_RS00900 -3.0 -2.3 50S ribosomal protein L39e compare
MMP_RS08500 -3.0 -7.1 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMP_RS03600 -3.0 -2.2 triose-phosphate isomerase compare
MMP_RS08570 -3.0 -11.7 coenzyme F420-0:L-glutamate ligase compare
MMP_RS01880 -2.9 -7.6 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS00115 -2.9 -14.8 radical SAM protein compare
MMP_RS08860 -2.9 -5.7 MinD/ParA family protein compare
MMP_RS07090 -2.9 -11.9 tRNA (adenine-N1)-methyltransferase compare
MMP_RS06285 -2.9 -2.6 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS03700 -2.9 -10.3 sodium:proton antiporter compare
MMP_RS07200 -2.9 -8.7 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS01885 -2.9 -10.2 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS00685 -2.9 -4.9 2-phospho-L-lactate guanylyltransferase compare
MMP_RS02195 -2.9 -4.0 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS01380 -2.8 -5.0 PHP domain-containing protein compare
MMP_RS01700 -2.8 -0.7 dihydroxy-acid dehydratase compare
MMP_RS07730 -2.8 -2.1 pyruvate synthase subunit beta compare
MMP_RS06670 -2.7 -7.3 glucose-6-phosphate isomerase compare
MMP_RS00895 -2.7 -4.0 hypothetical protein compare
MMP_RS06855 -2.7 -11.1 hypothetical protein compare
MMP_RS02245 -2.7 -3.9 hypothetical protein compare
MMP_RS01900 -2.7 -15.9 hypothetical protein compare
MMP_RS00315 -2.7 -7.6 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS01800 -2.7 -3.9 TIGR00303 family protein compare
MMP_RS03025 -2.7 -5.9 molybdenum cofactor guanylyltransferase compare
MMP_RS07535 -2.7 -12.0 4Fe-4S binding protein compare
MMP_RS04780 -2.7 -3.9 ribonuclease P compare
MMP_RS06900 -2.7 -3.3 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS07555 -2.6 -0.9 monovalent cation/H+ antiporter subunit E compare
MMP_RS01220 -2.6 -8.4 hypothetical protein compare
MMP_RS03420 -2.6 -2.5 acetolactate synthase small subunit compare
MMP_RS05430 -2.6 -7.0 TIGR00288 family NYN domain-containing protein compare
MMP_RS08645 -2.6 -6.4 UPF0179 family protein compare
MMP_RS08210 -2.6 -2.5 phosphatidylglycerophosphatase A compare
MMP_RS06295 -2.6 -7.3 methanogenesis marker 14 protein compare
MMP_RS06230 -2.5 -2.4 helix-turn-helix domain-containing protein compare
MMP_RS00300 -2.5 -0.7 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS08660 -2.5 -10.6 DHH family phosphoesterase compare
MMP_RS04685 -2.5 -2.9 DUF126 domain-containing protein compare
MMP_RS08155 -2.5 -8.1 hypothetical protein compare
MMP_RS05920 -2.5 -0.5 50S ribosomal protein L37e compare
MMP_RS02875 -2.5 -9.2 chorismate pyruvate-lyase family protein compare
MMP_RS01905 -2.4 -13.1 glycosyltransferase compare
MMP_RS01755 -2.4 -1.2 DUF2097 domain-containing protein compare
MMP_RS06340 -2.4 -5.7 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS07435 -2.4 -2.1 GMP synthase subunit A compare
MMP_RS08820 -2.4 -5.1 hypothetical protein compare
MMP_RS07530 -2.3 -8.6 4Fe-4S binding protein compare
MMP_RS01180 -2.3 -1.5 XTP/dITP diphosphatase compare
MMP_RS08790 -2.3 -1.8 translation initiation factor IF-2 subunit alpha compare
MMP_RS08330 -2.3 -5.9 NADH-quinone oxidoreductase subunit H compare
MMP_RS01265 -2.3 -1.9 hypothetical protein compare
MMP_RS00750 -2.3 -2.8 fumarate hydratase compare
MMP_RS05640 -2.3 -6.6 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS04090 -2.3 -3.0 hypothetical protein compare
MMP_RS01975 -2.3 -15.1 hypothetical protein compare
MMP_RS05425 -2.3 -5.0 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS05555 -2.3 -1.3 DUF4040 domain-containing protein compare
MMP_RS04500 -2.3 -14.2 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS07005 -2.2 -0.5 4Fe-4S binding protein compare
MMP_RS05460 -2.2 -10.5 YcaO-related McrA-glycine thioamidation protein compare
MMP_RS08225 -2.2 -8.6 RimK family alpha-L-glutamate ligase compare
MMP_RS06730 -2.2 -1.6 phosphopantothenate/pantothenate synthetase compare
MMP_RS05280 -2.2 -10.8 COG1361 S-layer family protein compare
MMP_RS01890 -2.1 -5.4 nucleotide sugar dehydrogenase compare
MMP_RS08785 -2.1 -1.1 RNA-protein complex protein Nop10 compare
MMP_RS03475 -2.1 -0.6 hypothetical protein compare
MMP_RS05540 -2.1 -2.2 hypothetical protein compare
MMP_RS01445 -2.0 -6.1 hypothetical protein compare
MMP_RS05925 -2.0 -4.5 small nuclear ribonucleoprotein compare
MMP_RS08460 -2.0 -2.0 proteasome-activating nucleotidase compare
MMP_RS06975 -2.0 -1.9 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS01365 -2.0 -2.7 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS01920 -2.0 -11.9 glycosyltransferase family 2 protein compare
MMP_RS05345 -2.0 -6.9 hypothetical protein compare
MMP_RS03020 -2.0 -4.7 peptidylprolyl isomerase compare
MMP_RS06630 -2.0 -0.9 UPF0058 family protein compare
MMP_RS04615 -2.0 -2.4 PDGLE domain-containing protein compare
MMP_RS04900 -2.0 -13.1 hypothetical protein compare
MMP_RS05930 -2.0 -2.0 3-isopropylmalate dehydratase large subunit compare
MMP_RS02780 -2.0 -6.8 hypothetical protein compare
MMP_RS00955 -2.0 -7.6 coenzyme gamma-F420-2:alpha-L-glutamate ligase compare
MMP_RS08635 -1.9 -1.8 UbiA family prenyltransferase compare
MMP_RS04870 -1.9 -5.0 TIGR02253 family HAD-type hydrolase compare
MMP_RS01335 -1.9 -1.5 prefoldin subunit beta compare
MMP_RS09055 -1.9 -0.8 CAP domain-containing protein compare
MMP_RS06035 -1.9 -8.4 glycosyltransferase family 2 protein compare
MMP_RS00035 -1.9 -5.2 DUF2098 family protein compare
MMP_RS05635 -1.9 -5.8 NAD-dependent epimerase/dehydratase family protein compare
MMP_RS01545 -1.9 -0.9 CBS domain-containing protein compare
MMP_RS01005 -1.9 -1.3 riboflavin synthase compare
MMP_RS08195 -1.8 -6.8 hypothetical protein compare
MMP_RS01665 -1.8 -2.8 DUF2111 domain-containing protein compare
MMP_RS03555 -1.8 -5.8 transcriptional regulator compare
MMP_RS02870 -1.8 -7.0 hypothetical protein compare
MMP_RS08745 -1.8 -5.7 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS01970 -1.8 -9.0 TIGR04279 domain-containing protein compare
MMP_RS08095 -1.8 -5.8 dethiobiotin synthase compare
MMP_RS07710 -1.8 -6.8 cell division protein FtsZ compare


Specific Phenotypes

For 5 genes in this experiment

For nitrogen source L-Glutamic acid monopotassium salt monohydrate in Methanococcus maripaludis S2

For nitrogen source L-Glutamic acid monopotassium salt monohydrate across organisms