Experiment set10S135 for Methanococcus maripaludis S2

Compare to:

H2 N-free with 2mM Thymine

200 most important genes:

  gene name fitness t score description  
MMP_RS04710 -7.6 -2.0 hypothetical protein compare
MMP_RS07345 -5.8 -10.5 glycine synthesis protein GlyXL (from data) compare
MMP_RS06400 -5.6 -2.0 4Fe-4S binding protein compare
MMP_RS07390 -5.5 -3.4 cell division protein FtsZ compare
MMP_RS04440 -5.4 -10.3 nitrogenase iron protein compare
MMP_RS08720 -5.3 -1.7 4Fe-4S binding protein compare
MMP_RS02145 -5.2 -12.3 winged helix-turn-helix transcriptional regulator compare
MMP_RS03035 -5.1 -5.2 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS01175 -5.0 -6.1 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS04450 -4.9 -14.7 P-II family nitrogen regulator compare
MMP_RS02680 -4.8 -7.3 ABC transporter permease compare
MMP_RS00300 -4.8 -0.7 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS07845 -4.8 -3.1 LL-diaminopimelate aminotransferase compare
MMP_RS01830 -4.8 -1.8 tRNA-Val compare
MMP_RS04445 -4.7 -8.3 P-II family nitrogen regulator compare
MMP_RS04455 -4.6 -23.5 nitrogenase subunit alpha compare
MMP_RS04470 -4.6 -17.4 nitrogenase compare
MMP_RS04465 -4.6 -19.4 nitrogenase iron-molybdenum cofactor biosynthesis protein NifE compare
MMP_RS05500 -4.6 -11.7 2-isopropylmalate synthase compare
MMP_RS02685 -4.6 -13.3 molybdate ABC transporter substrate-binding protein compare
MMP_RS01385 -4.6 -0.7 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS00750 -4.5 -3.3 fumarate hydratase compare
MMP_RS04460 -4.4 -22.0 nitrogenase molybdenum-iron protein subunit beta compare
MMP_RS08650 -4.4 -5.1 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS07635 -4.2 -8.6 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS07075 -4.2 -6.2 phosphomannomutase/phosphoglucomutase compare
MMP_RS00555 -4.2 -9.2 MFS transporter compare
MMP_RS01500 -4.2 -3.0 CBS domain-containing protein compare
MMP_RS01020 -4.1 -1.4 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS05550 -4.1 -0.9 cation:proton antiporter compare
MMP_RS01005 -4.0 -1.5 riboflavin synthase compare
MMP_RS02670 -4.0 -15.8 ATP-binding cassette domain-containing protein compare
MMP_RS06630 -4.0 -0.9 UPF0058 family protein compare
MMP_RS06730 -4.0 -2.0 phosphopantothenate/pantothenate synthetase compare
MMP_RS02010 -4.0 -12.0 PHP domain-containing protein compare
MMP_RS00040 -3.9 -6.2 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS01610 -3.9 -3.7 hypothetical protein compare
MMP_RS08440 -3.8 -3.6 cell division protein SepF compare
MMP_RS06120 -3.8 -2.6 UPF0147 family protein compare
MMP_RS06315 -3.8 -0.8 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS07380 -3.7 -2.4 transcription elongation factor Spt5 compare
MMP_RS05250 -3.7 -2.0 NFYB/HAP3 family transcription factor subunit compare
MMP_RS00515 -3.6 -0.8 DUF655 domain-containing protein compare
MMP_RS02675 -3.6 -3.8 hypothetical protein compare
MMP_RS01755 -3.6 -1.3 DUF2097 domain-containing protein compare
MMP_RS06725 -3.6 -13.8 hypothetical protein compare
MMP_RS08715 -3.6 -2.2 formylmethanofuran dehydrogenase subunit B compare
MMP_RS07605 -3.5 -4.5 diadenylate cyclase compare
MMP_RS06475 -3.4 -5.0 FAD-dependent oxidoreductase compare
MMP_RS08210 -3.4 -3.2 phosphatidylglycerophosphatase A compare
MMP_RS03450 -3.4 -2.5 glycine synthesis protein GlyXS (from data) compare
MMP_RS02730 -3.4 -10.2 ModD protein compare
MMP_RS07185 -3.4 -13.9 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS04090 -3.4 -2.7 hypothetical protein compare
MMP_RS07730 -3.4 -2.7 pyruvate synthase subunit beta compare
MMP_RS01900 -3.4 -17.0 hypothetical protein compare
MMP_RS08635 -3.4 -2.7 UbiA family prenyltransferase compare
MMP_RS06270 -3.4 -6.8 TIGR00300 family protein compare
MMP_RS01880 -3.4 -10.6 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS07365 -3.3 -13.9 2-phosphoglycerate kinase compare
MMP_RS08860 -3.3 -5.5 MinD/ParA family protein compare
MMP_RS01225 -3.3 -5.8 DUF5379 domain-containing protein compare
MMP_RS03110 -3.3 -8.0 glycosyltransferase family 2 protein compare
MMP_RS00695 -3.3 -0.7 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS01875 -3.3 -11.1 N-acetyltransferase compare
MMP_RS01380 -3.3 -5.6 PHP domain-containing protein compare
MMP_RS01455 -3.2 -9.4 nickel pincer cofactor biosynthesis protein LarC compare
MMP_RS06285 -3.2 -2.8 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS03960 -3.2 -2.0 hypothetical protein compare
MMP_RS03435 -3.2 -2.1 ketol-acid reductoisomerase compare
MMP_RS06625 -3.2 -2.3 DNA primase compare
MMP_RS07525 -3.2 -9.6 4Fe-4S binding protein compare
MMP_RS01925 -3.2 -11.5 DUF1616 domain-containing protein compare
MMP_RS01325 -3.1 -2.8 dihydroneopterin aldolase family protein compare
MMP_RS02195 -3.1 -5.2 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS05920 -3.0 -0.6 50S ribosomal protein L37e compare
MMP_RS05925 -3.0 -4.8 small nuclear ribonucleoprotein compare
MMP_RS08785 -3.0 -1.5 RNA-protein complex protein Nop10 compare
MMP_RS00455 -3.0 -6.6 orotate phosphoribosyltransferase-like protein compare
MMP_RS05265 -2.9 -2.7 2-isopropylmalate synthase compare
MMP_RS03700 -2.9 -9.3 sodium:proton antiporter compare
MMP_RS04215 -2.9 -8.5 nickel pincer cofactor biosynthesis protein LarB compare
MMP_RS05430 -2.9 -7.1 TIGR00288 family NYN domain-containing protein compare
MMP_RS08645 -2.8 -11.5 UPF0179 family protein compare
MMP_RS01545 -2.8 -1.2 CBS domain-containing protein compare
MMP_RS03315 -2.8 -1.5 ferrous iron transport protein A compare
MMP_RS08500 -2.7 -7.2 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMP_RS03025 -2.7 -6.8 molybdenum cofactor guanylyltransferase compare
MMP_RS00730 -2.7 -6.2 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS08300 -2.7 -1.2 metal-sulfur cluster assembly factor compare
MMP_RS01800 -2.7 -4.5 TIGR00303 family protein compare
MMP_RS07695 -2.7 -8.3 DUF3236 domain-containing protein compare
MMP_RS00305 -2.6 -1.6 phosphoribosyl-ATP diphosphatase compare
MMP_RS07445 -2.6 -5.3 helix-turn-helix domain-containing protein compare
MMP_RS02340 -2.6 -2.5 DNA-directed RNA polymerase subunit E'' compare
MMP_RS04585 -2.6 -11.0 AIR synthase related protein compare
MMP_RS06020 -2.6 -4.9 archaeoflavoprotein AfpA compare
MMP_RS02175 -2.6 -1.1 DUF1611 domain-containing protein compare
MMP_RS09020 -2.5 -1.5 hypothetical protein compare
MMP_RS06855 -2.5 -11.5 hypothetical protein compare
MMP_RS00310 -2.5 -10.0 CBS domain-containing protein compare
MMP_RS04890 -2.5 -1.1 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS01220 -2.5 -6.8 hypothetical protein compare
MMP_RS03420 -2.5 -4.2 acetolactate synthase small subunit compare
MMP_RS00985 -2.5 -4.0 CDC48 family AAA ATPase compare
MMP_RS00725 -2.4 -9.1 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS07435 -2.4 -2.0 GMP synthase subunit A compare
MMP_RS07600 -2.4 -2.8 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS04850 -2.4 -16.1 UPF0254 family protein compare
MMP_RS06375 -2.4 -5.9 ATP-dependent sacrificial sulfur transferase LarE compare
MMP_RS04870 -2.4 -7.8 TIGR02253 family HAD-type hydrolase compare
MMP_RS06395 -2.4 -3.4 ThiF family adenylyltransferase compare
MMP_RS00735 -2.4 -3.4 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS08195 -2.3 -10.7 hypothetical protein compare
MMP_RS00810 -2.3 -7.5 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS00915 -2.3 -5.6 DUF116 domain-containing protein compare
MMP_RS08705 -2.3 -5.0 sulfopyruvate decarboxylase subunit beta compare
MMP_RS06295 -2.3 -5.9 methanogenesis marker 14 protein compare
MMP_RS02800 -2.3 -5.1 nucleotidyltransferase domain-containing protein compare
MMP_RS02240 -2.3 -3.3 methanogenesis marker 7 protein compare
MMP_RS02355 -2.3 -3.6 30S ribosomal protein S27ae compare
MMP_RS01890 -2.2 -5.0 nucleotide sugar dehydrogenase compare
MMP_RS00685 -2.2 -3.4 2-phospho-L-lactate guanylyltransferase compare
MMP_RS01905 -2.2 -11.6 glycosyltransferase compare
MMP_RS07200 -2.2 -5.4 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS06925 -2.2 -2.4 ribonuclease VapC4 compare
MMP_RS08165 -2.2 -2.3 phosphoglycerate dehydrogenase compare
MMP_RS08660 -2.2 -8.9 DHH family phosphoesterase compare
MMP_RS06940 -2.2 -3.7 polyprenyl diphosphate synthase compare
MMP_RS04685 -2.2 -3.2 DUF126 domain-containing protein compare
MMP_RS02245 -2.1 -3.2 hypothetical protein compare
MMP_RS01885 -2.1 -7.3 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS04900 -2.1 -14.6 hypothetical protein compare
MMP_RS08855 -2.1 -8.6 hypothetical protein compare
MMP_RS03580 -2.1 -3.8 signal recognition particle-docking protein FtsY compare
MMP_RS04955 -2.1 -5.4 DNA topoisomerase I compare
MMP_RS07955 -2.1 -5.1 FumA C-terminus/TtdB family hydratase beta subunit compare
MMP_RS07355 -2.1 -0.9 transcription factor S compare
MMP_RS08435 -2.1 -1.9 Era-like GTP-binding protein compare
MMP_RS01915 -2.1 -11.9 DUF354 domain-containing protein compare
MMP_RS05355 -2.0 -0.9 hypothetical protein compare
MMP_RS05540 -2.0 -2.1 hypothetical protein compare
MMP_RS05930 -2.0 -2.7 3-isopropylmalate dehydratase large subunit compare
MMP_RS04780 -2.0 -3.0 ribonuclease P compare
MMP_RS01335 -2.0 -1.8 prefoldin subunit beta compare
MMP_RS08820 -2.0 -5.0 hypothetical protein compare
MMP_RS01085 -2.0 -2.2 hypothetical protein compare
MMP_RS00035 -2.0 -5.5 DUF2098 family protein compare
MMP_RS01725 -2.0 -4.0 class I SAM-dependent methyltransferase family protein compare
MMP_RS07700 -1.9 -7.9 DUF1188 domain-containing protein compare
MMP_RS06895 -1.9 -1.5 selenocysteine-specific translation elongation factor compare
MMP_RS01180 -1.9 -1.4 XTP/dITP diphosphatase compare
MMP_RS05640 -1.9 -6.5 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS01970 -1.9 -9.6 TIGR04279 domain-containing protein compare
MMP_RS08790 -1.9 -2.0 translation initiation factor IF-2 subunit alpha compare
MMP_RS06670 -1.9 -3.9 glucose-6-phosphate isomerase compare
MMP_RS01795 -1.9 -1.4 methanogenesis marker 6 protein compare
MMP_RS04790 -1.9 -9.6 4-hydroxy-tetrahydrodipicolinate reductase compare
MMP_RS08155 -1.9 -5.4 hypothetical protein compare
MMP_RS01975 -1.9 -11.0 hypothetical protein compare
MMP_RS02190 -1.9 -2.5 sulfopyruvate decarboxylase subunit alpha compare
MMP_RS01195 -1.8 -1.3 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS06175 -1.8 -5.7 winged helix-turn-helix transcriptional regulator compare
MMP_RS01700 -1.8 -0.8 dihydroxy-acid dehydratase compare
MMP_RS07090 -1.8 -7.2 tRNA (adenine-N1)-methyltransferase compare
MMP_RS03600 -1.8 -1.6 triose-phosphate isomerase compare
MMP_RS08570 -1.8 -8.8 coenzyme F420-0:L-glutamate ligase compare
MMP_RS07575 -1.8 -2.6 RNA ligase partner protein compare
MMP_RS02780 -1.7 -6.1 hypothetical protein compare
MMP_RS01265 -1.7 -2.0 hypothetical protein compare
MMP_RS00115 -1.7 -8.6 radical SAM protein compare
MMP_RS03090 -1.7 -5.1 cation:proton antiporter compare
MMP_RS05020 -1.7 -2.4 hypothetical protein compare
MMP_RS01445 -1.7 -4.2 hypothetical protein compare
MMP_RS07535 -1.7 -6.2 4Fe-4S binding protein compare
MMP_RS09025 -1.7 -1.1 hypothetical protein compare
MMP_RS07710 -1.6 -5.6 cell division protein FtsZ compare
MMP_RS01910 -1.6 -8.1 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMP_RS05435 -1.6 -6.7 5'/3'-nucleotidase SurE compare
MMP_RS02875 -1.6 -5.4 chorismate pyruvate-lyase family protein compare
MMP_RS05280 -1.6 -6.9 COG1361 S-layer family protein compare
MMP_RS08745 -1.6 -4.7 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS01920 -1.6 -8.8 glycosyltransferase family 2 protein compare
MMP_RS03445 -1.6 -1.0 methanogenesis marker 17 protein compare
MMP_RS05345 -1.6 -5.7 hypothetical protein compare
MMP_RS02165 -1.5 -4.9 tRNA-dihydrouridine synthase compare
MMP_RS00720 -1.5 -5.6 metal-dependent hydrolase compare
MMP_RS08995 -1.5 -1.4 hypothetical protein compare
MMP_RS01665 -1.5 -2.9 DUF2111 domain-containing protein compare
MMP_RS05440 -1.5 -5.3 winged helix-turn-helix transcriptional regulator compare
MMP_RS03535 -1.5 -3.0 helix-turn-helix transcriptional regulator compare
MMP_RS04500 -1.5 -9.5 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS06350 -1.5 -2.5 HesA/MoeB/ThiF family protein compare
MMP_RS00895 -1.5 -2.5 hypothetical protein compare
MMP_RS02110 -1.5 -2.1 hypothetical protein compare
MMP_RS00320 -1.5 -1.1 class I SAM-dependent methyltransferase compare
MMP_RS08330 -1.4 -4.7 NADH-quinone oxidoreductase subunit H compare
MMP_RS04615 -1.4 -3.2 PDGLE domain-containing protein compare
MMP_RS02135 -1.4 -3.0 DUF5612 domain-containing protein compare
MMP_RS06885 -1.4 -2.1 50S ribosome-binding GTPase compare


Specific Phenotypes

For 1 genes in this experiment

For nitrogen source Thymine in Methanococcus maripaludis S2

For nitrogen source Thymine across organisms