Experiment set10S133 for Methanococcus maripaludis S2

Compare to:

H2 N-free with 5mM Inosine

200 most important genes:

  gene name fitness t score description  
MMP_RS01500 -5.3 -2.3 CBS domain-containing protein compare
MMP_RS00685 -5.3 -3.8 2-phospho-L-lactate guanylyltransferase compare
MMP_RS04710 -5.2 -1.8 hypothetical protein compare
MMP_RS03450 -4.9 -1.9 glycine synthesis protein GlyXS (from data) compare
MMP_RS01175 -4.9 -4.8 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS03435 -4.9 -1.6 ketol-acid reductoisomerase compare
MMP_RS06285 -4.8 -2.4 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS06400 -4.5 -1.6 4Fe-4S binding protein compare
MMP_RS02240 -4.5 -3.0 methanogenesis marker 7 protein compare
MMP_RS04450 -4.5 -12.9 P-II family nitrogen regulator compare
MMP_RS04445 -4.5 -7.8 P-II family nitrogen regulator compare
MMP_RS02195 -4.3 -3.3 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS01385 -4.3 -0.5 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS02670 -4.2 -14.2 ATP-binding cassette domain-containing protein compare
MMP_RS05500 -4.2 -8.8 2-isopropylmalate synthase compare
MMP_RS04470 -4.2 -21.4 nitrogenase compare
MMP_RS04685 -4.2 -3.1 DUF126 domain-containing protein compare
MMP_RS04455 -4.2 -21.1 nitrogenase subunit alpha compare
MMP_RS06120 -4.2 -1.9 UPF0147 family protein compare
MMP_RS07730 -4.1 -1.5 pyruvate synthase subunit beta compare
MMP_RS02675 -4.1 -3.1 hypothetical protein compare
MMP_RS02345 -4.1 -2.7 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS06625 -4.1 -2.3 DNA primase compare
MMP_RS00985 -4.1 -5.0 CDC48 family AAA ATPase compare
MMP_RS04440 -4.1 -11.2 nitrogenase iron protein compare
MMP_RS08715 -4.0 -1.8 formylmethanofuran dehydrogenase subunit B compare
MMP_RS04460 -4.0 -20.6 nitrogenase molybdenum-iron protein subunit beta compare
MMP_RS02010 -4.0 -9.3 PHP domain-containing protein compare
MMP_RS02680 -3.9 -5.8 ABC transporter permease compare
MMP_RS01325 -3.9 -2.1 dihydroneopterin aldolase family protein compare
MMP_RS04465 -3.8 -17.2 nitrogenase iron-molybdenum cofactor biosynthesis protein NifE compare
MMP_RS03315 -3.8 -1.3 ferrous iron transport protein A compare
MMP_RS02685 -3.8 -12.2 molybdate ABC transporter substrate-binding protein compare
MMP_RS05550 -3.8 -0.6 cation:proton antiporter compare
MMP_RS01830 -3.7 -1.5 tRNA-Val compare
MMP_RS01225 -3.7 -5.1 DUF5379 domain-containing protein compare
MMP_RS03035 -3.7 -3.3 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS02355 -3.7 -2.6 30S ribosomal protein S27ae compare
MMP_RS02800 -3.7 -9.1 nucleotidyltransferase domain-containing protein compare
MMP_RS06295 -3.6 -7.7 methanogenesis marker 14 protein compare
MMP_RS03110 -3.6 -7.2 glycosyltransferase family 2 protein compare
MMP_RS01020 -3.6 -1.0 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS00300 -3.6 -0.6 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS07185 -3.5 -12.5 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS00555 -3.5 -7.9 MFS transporter compare
MMP_RS07345 -3.5 -7.1 glycine synthesis protein GlyXL (from data) compare
MMP_RS08165 -3.5 -1.8 phosphoglycerate dehydrogenase compare
MMP_RS03580 -3.5 -2.8 signal recognition particle-docking protein FtsY compare
MMP_RS01335 -3.5 -2.1 prefoldin subunit beta compare
MMP_RS03960 -3.5 -1.4 hypothetical protein compare
MMP_RS04790 -3.4 -13.6 4-hydroxy-tetrahydrodipicolinate reductase compare
MMP_RS04780 -3.4 -3.0 ribonuclease P compare
MMP_RS08440 -3.4 -2.8 cell division protein SepF compare
MMP_RS07635 -3.4 -8.1 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS02145 -3.4 -11.3 winged helix-turn-helix transcriptional regulator compare
MMP_RS07365 -3.4 -11.3 2-phosphoglycerate kinase compare
MMP_RS05930 -3.4 -1.9 3-isopropylmalate dehydratase large subunit compare
MMP_RS04890 -3.4 -0.8 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS08100 -3.3 -6.8 8-amino-7-oxononanoate synthase compare
MMP_RS04500 -3.3 -15.0 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS00515 -3.3 -0.6 DUF655 domain-containing protein compare
MMP_RS04215 -3.3 -8.1 nickel pincer cofactor biosynthesis protein LarB compare
MMP_RS06020 -3.3 -4.8 archaeoflavoprotein AfpA compare
MMP_RS05515 -3.3 -7.1 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS06375 -3.3 -3.7 ATP-dependent sacrificial sulfur transferase LarE compare
MMP_RS09020 -3.3 -1.6 hypothetical protein compare
MMP_RS01455 -3.2 -7.7 nickel pincer cofactor biosynthesis protein LarC compare
MMP_RS06370 -3.2 -4.6 biotin synthase BioB compare
MMP_RS05555 -3.2 -0.9 DUF4040 domain-containing protein compare
MMP_RS01380 -3.2 -5.4 PHP domain-containing protein compare
MMP_RS08500 -3.2 -5.4 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMP_RS07075 -3.2 -5.4 phosphomannomutase/phosphoglucomutase compare
MMP_RS07525 -3.2 -9.1 4Fe-4S binding protein compare
MMP_RS03700 -3.1 -10.0 sodium:proton antiporter compare
MMP_RS06475 -3.1 -4.7 FAD-dependent oxidoreductase compare
MMP_RS02730 -3.0 -10.9 ModD protein compare
MMP_RS01610 -3.0 -3.0 hypothetical protein compare
MMP_RS03025 -3.0 -5.5 molybdenum cofactor guanylyltransferase compare
MMP_RS06270 -3.0 -5.6 TIGR00300 family protein compare
MMP_RS01800 -3.0 -3.5 TIGR00303 family protein compare
MMP_RS08195 -3.0 -9.6 hypothetical protein compare
MMP_RS03400 -3.0 -2.6 archease compare
MMP_RS00040 -3.0 -4.1 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS05265 -2.9 -2.1 2-isopropylmalate synthase compare
MMP_RS06885 -2.9 -2.0 50S ribosome-binding GTPase compare
MMP_RS02245 -2.9 -2.8 hypothetical protein compare
MMP_RS07600 -2.9 -2.1 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS00310 -2.9 -11.5 CBS domain-containing protein compare
MMP_RS06855 -2.9 -9.1 hypothetical protein compare
MMP_RS08595 -2.9 -0.9 flagellar protein C compare
MMP_RS06925 -2.8 -2.2 ribonuclease VapC4 compare
MMP_RS07380 -2.8 -1.8 transcription elongation factor Spt5 compare
MMP_RS07350 -2.8 -1.7 preprotein translocase subunit Sec61beta compare
MMP_RS07845 -2.8 -1.8 LL-diaminopimelate aminotransferase compare
MMP_RS06725 -2.8 -11.0 hypothetical protein compare
MMP_RS07390 -2.8 -2.4 cell division protein FtsZ compare
MMP_RS05920 -2.8 -0.4 50S ribosomal protein L37e compare
MMP_RS07435 -2.7 -1.6 GMP synthase subunit A compare
MMP_RS00895 -2.7 -3.8 hypothetical protein compare
MMP_RS08720 -2.7 -1.3 4Fe-4S binding protein compare
MMP_RS03600 -2.7 -2.0 triose-phosphate isomerase compare
MMP_RS02135 -2.7 -4.4 DUF5612 domain-containing protein compare
MMP_RS00810 -2.7 -7.3 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS06730 -2.7 -1.3 phosphopantothenate/pantothenate synthetase compare
MMP_RS00675 -2.7 -0.9 nitroreductase family protein compare
MMP_RS05425 -2.6 -3.9 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS01220 -2.6 -7.3 hypothetical protein compare
MMP_RS06110 -2.6 -2.8 ATP-dependent protease LonB compare
MMP_RS02190 -2.6 -2.6 sulfopyruvate decarboxylase subunit alpha compare
MMP_RS06895 -2.6 -1.6 selenocysteine-specific translation elongation factor compare
MMP_RS07090 -2.6 -7.8 tRNA (adenine-N1)-methyltransferase compare
MMP_RS01925 -2.6 -9.0 DUF1616 domain-containing protein compare
MMP_RS01445 -2.6 -7.4 hypothetical protein compare
MMP_RS00315 -2.6 -5.6 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS01545 -2.6 -0.9 CBS domain-containing protein compare
MMP_RS08210 -2.6 -2.1 phosphatidylglycerophosphatase A compare
MMP_RS06630 -2.6 -0.7 UPF0058 family protein compare
MMP_RS01005 -2.5 -1.1 riboflavin synthase compare
MMP_RS07605 -2.5 -3.3 diadenylate cyclase compare
MMP_RS08095 -2.5 -6.0 dethiobiotin synthase compare
MMP_RS08650 -2.5 -3.8 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS05430 -2.5 -5.2 TIGR00288 family NYN domain-containing protein compare
MMP_RS05280 -2.5 -6.1 COG1361 S-layer family protein compare
MMP_RS04850 -2.5 -13.3 UPF0254 family protein compare
MMP_RS08645 -2.5 -5.3 UPF0179 family protein compare
MMP_RS05640 -2.5 -7.4 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS01725 -2.5 -4.1 class I SAM-dependent methyltransferase family protein compare
MMP_RS07575 -2.4 -2.7 RNA ligase partner protein compare
MMP_RS04585 -2.4 -8.9 AIR synthase related protein compare
MMP_RS03205 -2.4 -1.5 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS02280 -2.4 -0.7 DUF211 domain-containing protein compare
MMP_RS00115 -2.4 -8.7 radical SAM protein compare
MMP_RS07445 -2.4 -4.3 helix-turn-helix domain-containing protein compare
MMP_RS01180 -2.4 -2.1 XTP/dITP diphosphatase compare
MMP_RS07545 -2.3 -0.8 HTH domain-containing protein compare
MMP_RS06940 -2.3 -3.4 polyprenyl diphosphate synthase compare
MMP_RS07200 -2.3 -5.2 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS07005 -2.3 -0.4 4Fe-4S binding protein compare
MMP_RS08860 -2.3 -4.9 MinD/ParA family protein compare
MMP_RS01875 -2.3 -9.9 N-acetyltransferase compare
MMP_RS08370 -2.3 -0.6 cation:proton antiporter subunit C compare
MMP_RS05765 -2.3 -4.9 M42 family metallopeptidase compare
MMP_RS03090 -2.3 -5.5 cation:proton antiporter compare
MMP_RS03475 -2.3 -0.5 hypothetical protein compare
MMP_RS06670 -2.3 -5.1 glucose-6-phosphate isomerase compare
MMP_RS00915 -2.3 -6.7 DUF116 domain-containing protein compare
MMP_RS00455 -2.3 -6.4 orotate phosphoribosyltransferase-like protein compare
MMP_RS08435 -2.2 -1.5 Era-like GTP-binding protein compare
MMP_RS07700 -2.2 -9.5 DUF1188 domain-containing protein compare
MMP_RS07750 -2.2 -3.9 DUF357 domain-containing protein compare
MMP_RS05845 -2.2 -1.5 tRNA-intron lyase compare
MMP_RS05925 -2.2 -3.3 small nuclear ribonucleoprotein compare
MMP_RS04090 -2.2 -1.8 hypothetical protein compare
MMP_RS08820 -2.2 -4.0 hypothetical protein compare
MMP_RS08105 -2.1 -5.3 6-carboxyhexanoate--CoA ligase compare
MMP_RS00725 -2.1 -5.5 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS05540 -2.1 -2.5 hypothetical protein compare
MMP_RS07875 -2.1 -4.6 hypothetical protein compare
MMP_RS01795 -2.1 -1.0 methanogenesis marker 6 protein compare
MMP_RS01265 -2.1 -1.8 hypothetical protein compare
MMP_RS05020 -2.1 -3.4 hypothetical protein compare
MMP_RS01880 -2.1 -6.4 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS01900 -2.1 -11.3 hypothetical protein compare
MMP_RS01885 -2.1 -6.6 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS06395 -2.0 -2.5 ThiF family adenylyltransferase compare
MMP_RS08300 -2.0 -0.7 metal-sulfur cluster assembly factor compare
MMP_RS00735 -2.0 -2.3 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS07535 -2.0 -6.0 4Fe-4S binding protein compare
MMP_RS08635 -2.0 -1.6 UbiA family prenyltransferase compare
MMP_RS08745 -2.0 -4.5 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS03445 -2.0 -0.8 methanogenesis marker 17 protein compare
MMP_RS00730 -2.0 -4.6 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS03095 -1.9 -3.7 diphthine synthase compare
MMP_RS08155 -1.9 -6.7 hypothetical protein compare
MMP_RS00110 -1.9 -1.9 hypothetical protein compare
MMP_RS05285 -1.9 -3.7 MMPL family transporter compare
MMP_RS06105 -1.8 -4.6 hydrogenase maturation peptidase HycI compare
MMP_RS06315 -1.8 -0.6 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS03015 -1.8 -3.6 GTP 3' 8-cyclase MoaA compare
MMP_RS00620 -1.8 -5.9 4Fe-4S binding protein compare
MMP_RS02875 -1.8 -4.4 chorismate pyruvate-lyase family protein compare
MMP_RS05460 -1.8 -7.6 YcaO-related McrA-glycine thioamidation protein compare
MMP_RS07580 -1.7 -2.3 DUF356 domain-containing protein compare
MMP_RS04955 -1.7 -4.1 DNA topoisomerase I compare
MMP_RS01075 -1.7 -1.6 hypothetical protein compare
MMP_RS06340 -1.7 -5.3 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS01665 -1.7 -2.5 DUF2111 domain-containing protein compare
MMP_RS07555 -1.7 -0.6 monovalent cation/H+ antiporter subunit E compare
MMP_RS08330 -1.7 -2.9 NADH-quinone oxidoreductase subunit H compare
MMP_RS03140 -1.7 -6.7 hypothetical protein compare
MMP_RS01975 -1.7 -9.2 hypothetical protein compare
MMP_RS00060 -1.7 -1.8 3-dehydroquinate synthase II compare
MMP_RS05815 -1.6 -1.6 NOL1/NOP2/sun family putative RNA methylase compare
MMP_RS04870 -1.6 -3.2 TIGR02253 family HAD-type hydrolase compare
MMP_RS00945 -1.6 -0.9 PadR family transcriptional regulator compare
MMP_RS04605 -1.6 -2.4 cobalt ECF transporter T component CbiQ compare
MMP_RS05295 -1.6 -6.8 minichromosome maintenance protein MCM compare
MMP_RS00305 -1.6 -0.9 phosphoribosyl-ATP diphosphatase compare
MMP_RS05545 -1.6 -3.5 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS06230 -1.6 -1.8 helix-turn-helix domain-containing protein compare


Specific Phenotypes

For 6 genes in this experiment

For nitrogen source Inosine in Methanococcus maripaludis S2

For nitrogen source Inosine across organisms