Experiment set10S114 for Methanococcus maripaludis S2

Compare to:

H2 N-free with 10mM L-Phenylalanine

200 most important genes:

  gene name fitness t score description  
MMP_RS03315 -5.8 -1.5 ferrous iron transport protein A compare
MMP_RS01610 -5.0 -3.6 hypothetical protein compare
MMP_RS01005 -4.7 -1.0 riboflavin synthase compare
MMP_RS01385 -4.5 -0.7 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS04445 -4.4 -9.3 P-II family nitrogen regulator compare
MMP_RS04440 -4.4 -10.9 nitrogenase iron protein compare
MMP_RS08720 -4.4 -1.8 4Fe-4S binding protein compare
MMP_RS04450 -4.4 -20.0 P-II family nitrogen regulator compare
MMP_RS04465 -4.3 -19.3 nitrogenase iron-molybdenum cofactor biosynthesis protein NifE compare
MMP_RS02685 -4.3 -15.6 molybdate ABC transporter substrate-binding protein compare
MMP_RS07635 -4.3 -10.1 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS04470 -4.3 -22.5 nitrogenase compare
MMP_RS04460 -4.3 -23.7 nitrogenase molybdenum-iron protein subunit beta compare
MMP_RS02680 -4.2 -6.9 ABC transporter permease compare
MMP_RS03450 -4.2 -3.0 glycine synthesis protein GlyXS (from data) compare
MMP_RS07345 -4.2 -6.7 glycine synthesis protein GlyXL (from data) compare
MMP_RS04455 -4.2 -25.2 nitrogenase subunit alpha compare
MMP_RS07005 -4.2 -0.6 4Fe-4S binding protein compare
MMP_RS02010 -4.2 -11.0 PHP domain-containing protein compare
MMP_RS07185 -4.1 -13.1 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS02675 -4.0 -4.2 hypothetical protein compare
MMP_RS08435 -3.9 -3.0 Era-like GTP-binding protein compare
MMP_RS02670 -3.9 -8.4 ATP-binding cassette domain-containing protein compare
MMP_RS01755 -3.9 -1.1 DUF2097 domain-containing protein compare
MMP_RS07525 -3.9 -10.4 4Fe-4S binding protein compare
MMP_RS03035 -3.9 -5.1 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS04890 -3.8 -1.1 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS02245 -3.8 -3.6 hypothetical protein compare
MMP_RS01220 -3.8 -8.1 hypothetical protein compare
MMP_RS02730 -3.8 -12.6 ModD protein compare
MMP_RS06625 -3.8 -2.7 DNA primase compare
MMP_RS03580 -3.8 -4.4 signal recognition particle-docking protein FtsY compare
MMP_RS04710 -3.8 -2.6 hypothetical protein compare
MMP_RS06315 -3.7 -0.8 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS00300 -3.7 -0.8 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS05500 -3.6 -10.5 2-isopropylmalate synthase compare
MMP_RS01500 -3.6 -3.2 CBS domain-containing protein compare
MMP_RS01725 -3.6 -6.2 class I SAM-dependent methyltransferase family protein compare
MMP_RS01225 -3.5 -5.9 DUF5379 domain-containing protein compare
MMP_RS05550 -3.5 -0.9 cation:proton antiporter compare
MMP_RS08165 -3.5 -3.5 phosphoglycerate dehydrogenase compare
MMP_RS07845 -3.5 -3.0 LL-diaminopimelate aminotransferase compare
MMP_RS07605 -3.4 -4.1 diadenylate cyclase compare
MMP_RS07435 -3.4 -2.6 GMP synthase subunit A compare
MMP_RS02875 -3.4 -10.7 chorismate pyruvate-lyase family protein compare
MMP_RS02145 -3.4 -11.5 winged helix-turn-helix transcriptional regulator compare
MMP_RS07955 -3.4 -6.4 FumA C-terminus/TtdB family hydratase beta subunit compare
MMP_RS03435 -3.3 -2.4 ketol-acid reductoisomerase compare
MMP_RS04585 -3.3 -13.4 AIR synthase related protein compare
MMP_RS07445 -3.3 -7.3 helix-turn-helix domain-containing protein compare
MMP_RS01175 -3.3 -5.6 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS01020 -3.3 -1.3 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS01325 -3.2 -3.0 dihydroneopterin aldolase family protein compare
MMP_RS04090 -3.2 -3.1 hypothetical protein compare
MMP_RS02240 -3.2 -3.5 methanogenesis marker 7 protein compare
MMP_RS01800 -3.2 -4.7 TIGR00303 family protein compare
MMP_RS06475 -3.2 -5.5 FAD-dependent oxidoreductase compare
MMP_RS09020 -3.2 -2.0 hypothetical protein compare
MMP_RS08860 -3.1 -7.1 MinD/ParA family protein compare
MMP_RS00915 -3.1 -8.0 DUF116 domain-containing protein compare
MMP_RS06350 -3.1 -7.8 HesA/MoeB/ThiF family protein compare
MMP_RS02800 -3.1 -5.7 nucleotidyltransferase domain-containing protein compare
MMP_RS02195 -3.1 -4.8 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS05925 -3.0 -4.1 small nuclear ribonucleoprotein compare
MMP_RS00455 -3.0 -9.6 orotate phosphoribosyltransferase-like protein compare
MMP_RS06285 -3.0 -3.4 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS00040 -3.0 -7.1 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS00555 -3.0 -4.3 MFS transporter compare
MMP_RS00985 -2.9 -6.0 CDC48 family AAA ATPase compare
MMP_RS07365 -2.9 -14.7 2-phosphoglycerate kinase compare
MMP_RS06295 -2.9 -9.9 methanogenesis marker 14 protein compare
MMP_RS00750 -2.9 -2.8 fumarate hydratase compare
MMP_RS03700 -2.9 -9.2 sodium:proton antiporter compare
MMP_RS06730 -2.9 -2.0 phosphopantothenate/pantothenate synthetase compare
MMP_RS06855 -2.9 -11.0 hypothetical protein compare
MMP_RS02355 -2.8 -3.9 30S ribosomal protein S27ae compare
MMP_RS08715 -2.8 -2.7 formylmethanofuran dehydrogenase subunit B compare
MMP_RS08210 -2.8 -2.5 phosphatidylglycerophosphatase A compare
MMP_RS03960 -2.7 -1.9 hypothetical protein compare
MMP_RS05515 -2.7 -7.5 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS07545 -2.7 -1.2 HTH domain-containing protein compare
MMP_RS00310 -2.7 -9.5 CBS domain-containing protein compare
MMP_RS03110 -2.7 -7.4 glycosyltransferase family 2 protein compare
MMP_RS01795 -2.7 -1.7 methanogenesis marker 6 protein compare
MMP_RS06400 -2.7 -2.1 4Fe-4S binding protein compare
MMP_RS07075 -2.7 -5.3 phosphomannomutase/phosphoglucomutase compare
MMP_RS07730 -2.7 -1.9 pyruvate synthase subunit beta compare
MMP_RS07575 -2.7 -6.0 RNA ligase partner protein compare
MMP_RS00685 -2.7 -4.3 2-phospho-L-lactate guanylyltransferase compare
MMP_RS03640 -2.7 -3.6 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS00810 -2.7 -9.2 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS06725 -2.6 -10.4 hypothetical protein compare
MMP_RS03025 -2.6 -7.1 molybdenum cofactor guanylyltransferase compare
MMP_RS02345 -2.6 -3.8 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS01455 -2.6 -5.7 nickel pincer cofactor biosynthesis protein LarC compare
MMP_RS05930 -2.6 -2.5 3-isopropylmalate dehydratase large subunit compare
MMP_RS07380 -2.6 -2.3 transcription elongation factor Spt5 compare
MMP_RS07600 -2.6 -2.7 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS01545 -2.6 -1.1 CBS domain-containing protein compare
MMP_RS04900 -2.6 -16.3 hypothetical protein compare
MMP_RS06355 -2.6 -2.2 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS06270 -2.5 -6.3 TIGR00300 family protein compare
MMP_RS05430 -2.5 -7.0 TIGR00288 family NYN domain-containing protein compare
MMP_RS08790 -2.5 -2.1 translation initiation factor IF-2 subunit alpha compare
MMP_RS08645 -2.5 -6.5 UPF0179 family protein compare
MMP_RS06120 -2.4 -2.2 UPF0147 family protein compare
MMP_RS08460 -2.4 -2.9 proteasome-activating nucleotidase compare
MMP_RS06895 -2.4 -1.8 selenocysteine-specific translation elongation factor compare
MMP_RS06630 -2.4 -1.1 UPF0058 family protein compare
MMP_RS01830 -2.4 -2.1 tRNA-Val compare
MMP_RS07390 -2.4 -3.0 cell division protein FtsZ compare
MMP_RS05265 -2.4 -2.2 2-isopropylmalate synthase compare
MMP_RS07200 -2.4 -7.7 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS05635 -2.4 -10.6 NAD-dependent epimerase/dehydratase family protein compare
MMP_RS08500 -2.4 -6.3 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMP_RS06670 -2.4 -6.5 glucose-6-phosphate isomerase compare
MMP_RS01720 -2.3 -2.1 replication factor C large subunit compare
MMP_RS07555 -2.3 -1.0 monovalent cation/H+ antiporter subunit E compare
MMP_RS00895 -2.3 -4.2 hypothetical protein compare
MMP_RS04790 -2.3 -9.4 4-hydroxy-tetrahydrodipicolinate reductase compare
MMP_RS08785 -2.2 -1.3 RNA-protein complex protein Nop10 compare
MMP_RS00735 -2.2 -3.6 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS04780 -2.2 -3.4 ribonuclease P compare
MMP_RS01085 -2.2 -2.1 hypothetical protein compare
MMP_RS01265 -2.2 -2.1 hypothetical protein compare
MMP_RS04685 -2.2 -3.2 DUF126 domain-containing protein compare
MMP_RS03440 -2.1 -1.4 MoaD/ThiS family protein compare
MMP_RS08660 -2.1 -9.4 DHH family phosphoesterase compare
MMP_RS05345 -2.1 -7.3 hypothetical protein compare
MMP_RS08650 -2.1 -3.5 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS05460 -2.1 -10.3 YcaO-related McrA-glycine thioamidation protein compare
MMP_RS03090 -2.1 -6.3 cation:proton antiporter compare
MMP_RS05540 -2.1 -2.5 hypothetical protein compare
MMP_RS03205 -2.1 -1.4 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS07685 -2.1 -7.1 TIGR01212 family radical SAM protein compare
MMP_RS07535 -2.1 -7.4 4Fe-4S binding protein compare
MMP_RS04870 -2.1 -4.8 TIGR02253 family HAD-type hydrolase compare
MMP_RS00900 -2.0 -2.3 50S ribosomal protein L39e compare
MMP_RS07355 -2.0 -0.9 transcription factor S compare
MMP_RS08940 -2.0 -1.3 MetS family NSS transporter small subunit compare
MMP_RS00515 -2.0 -0.7 DUF655 domain-containing protein compare
MMP_RS06020 -2.0 -4.6 archaeoflavoprotein AfpA compare
MMP_RS06035 -1.9 -8.2 glycosyltransferase family 2 protein compare
MMP_RS04500 -1.9 -12.6 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS04615 -1.9 -1.9 PDGLE domain-containing protein compare
MMP_RS08855 -1.9 -11.1 hypothetical protein compare
MMP_RS03445 -1.9 -1.1 methanogenesis marker 17 protein compare
MMP_RS05640 -1.9 -7.7 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS07755 -1.9 -1.4 DUF555 domain-containing protein compare
MMP_RS02780 -1.9 -5.3 hypothetical protein compare
MMP_RS03420 -1.9 -3.0 acetolactate synthase small subunit compare
MMP_RS03015 -1.9 -3.7 GTP 3' 8-cyclase MoaA compare
MMP_RS06105 -1.9 -7.7 hydrogenase maturation peptidase HycI compare
MMP_RS01380 -1.9 -3.8 PHP domain-containing protein compare
MMP_RS06925 -1.8 -2.9 ribonuclease VapC4 compare
MMP_RS04850 -1.8 -13.8 UPF0254 family protein compare
MMP_RS02165 -1.8 -8.0 tRNA-dihydrouridine synthase compare
MMP_RS04955 -1.8 -5.8 DNA topoisomerase I compare
MMP_RS00730 -1.8 -4.1 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS01700 -1.8 -0.8 dihydroxy-acid dehydratase compare
MMP_RS07695 -1.8 -4.8 DUF3236 domain-containing protein compare
MMP_RS06370 -1.8 -5.3 biotin synthase BioB compare
MMP_RS05545 -1.8 -3.7 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS05765 -1.8 -3.7 M42 family metallopeptidase compare
MMP_RS05250 -1.8 -1.6 NFYB/HAP3 family transcription factor subunit compare
MMP_RS07330 -1.7 -12.0 membrane protein compare
MMP_RS08300 -1.7 -0.9 metal-sulfur cluster assembly factor compare
MMP_RS07090 -1.7 -7.2 tRNA (adenine-N1)-methyltransferase compare
MMP_RS04720 -1.7 -2.2 DedA family protein compare
MMP_RS01875 -1.7 -8.2 N-acetyltransferase compare
MMP_RS03485 -1.7 -4.7 TIGR00267 family protein compare
MMP_RS01885 -1.7 -6.5 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS07710 -1.7 -5.6 cell division protein FtsZ compare
MMP_RS03140 -1.6 -8.3 hypothetical protein compare
MMP_RS02280 -1.6 -0.8 DUF211 domain-containing protein compare
MMP_RS03475 -1.6 -0.6 hypothetical protein compare
MMP_RS03095 -1.6 -4.3 diphthine synthase compare
MMP_RS02110 -1.6 -2.3 hypothetical protein compare
MMP_RS00725 -1.6 -5.5 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS04875 -1.6 -4.4 energy-converting hydrogenase B subunit P compare
MMP_RS06395 -1.6 -2.9 ThiF family adenylyltransferase compare
MMP_RS07750 -1.6 -4.0 DUF357 domain-containing protein compare
MMP_RS02340 -1.6 -1.4 DNA-directed RNA polymerase subunit E'' compare
MMP_RS08820 -1.5 -4.1 hypothetical protein compare
MMP_RS05440 -1.5 -5.9 winged helix-turn-helix transcriptional regulator compare
MMP_RS07700 -1.5 -8.8 DUF1188 domain-containing protein compare
MMP_RS04620 -1.5 -7.4 cobalt transporter CbiM compare
MMP_RS01365 -1.5 -2.2 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS03305 -1.5 -6.7 winged helix-turn-helix domain-containing protein compare
MMP_RS08195 -1.5 -5.1 hypothetical protein compare
MMP_RS08330 -1.5 -5.4 NADH-quinone oxidoreductase subunit H compare
MMP_RS06980 -1.5 -4.4 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMP_RS04215 -1.5 -3.4 nickel pincer cofactor biosynthesis protein LarB compare
MMP_RS01880 -1.5 -4.6 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS03600 -1.5 -1.2 triose-phosphate isomerase compare
MMP_RS08440 -1.5 -2.4 cell division protein SepF compare
MMP_RS01955 -1.5 -2.5 hypothetical protein compare
MMP_RS01925 -1.5 -7.1 DUF1616 domain-containing protein compare
MMP_RS05425 -1.4 -4.4 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS05295 -1.4 -6.9 minichromosome maintenance protein MCM compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in nitrogen source experiments

For nitrogen source L-Phenylalanine across organisms