Experiment set10S101 for Methanococcus maripaludis S2

Compare to:

H2 N-free with 10mM L-Glutamic acid monopotassium salt monohydrate

200 most important genes:

  gene name fitness t score description  
MMP_RS06895 -5.3 -1.9 selenocysteine-specific translation elongation factor compare
MMP_RS07845 -4.9 -2.4 LL-diaminopimelate aminotransferase compare
MMP_RS01795 -4.7 -1.6 methanogenesis marker 6 protein compare
MMP_RS07730 -4.5 -2.1 pyruvate synthase subunit beta compare
MMP_RS01500 -4.4 -3.1 CBS domain-containing protein compare
MMP_RS04445 -4.4 -12.2 P-II family nitrogen regulator compare
MMP_RS02355 -4.3 -3.7 30S ribosomal protein S27ae compare
MMP_RS04710 -4.3 -2.3 hypothetical protein compare
MMP_RS04455 -4.3 -22.1 nitrogenase subunit alpha compare
MMP_RS03435 -4.2 -2.4 ketol-acid reductoisomerase compare
MMP_RS04440 -4.2 -13.1 nitrogenase iron protein compare
MMP_RS01005 -4.2 -1.2 riboflavin synthase compare
MMP_RS04465 -4.2 -20.3 nitrogenase iron-molybdenum cofactor biosynthesis protein NifE compare
MMP_RS06475 -4.1 -5.8 FAD-dependent oxidoreductase compare
MMP_RS04460 -4.1 -22.4 nitrogenase molybdenum-iron protein subunit beta compare
MMP_RS05500 -4.1 -9.8 2-isopropylmalate synthase compare
MMP_RS04470 -4.0 -22.1 nitrogenase compare
MMP_RS07345 -4.0 -8.8 glycine synthesis protein GlyXL (from data) compare
MMP_RS08165 -3.9 -2.5 phosphoglycerate dehydrogenase compare
MMP_RS04450 -3.9 -18.1 P-II family nitrogen regulator compare
MMP_RS08435 -3.9 -2.6 Era-like GTP-binding protein compare
MMP_RS01175 -3.9 -6.4 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS02685 -3.8 -14.0 molybdate ABC transporter substrate-binding protein compare
MMP_RS02675 -3.8 -4.0 hypothetical protein compare
MMP_RS01325 -3.8 -2.4 dihydroneopterin aldolase family protein compare
MMP_RS05920 -3.8 -0.5 50S ribosomal protein L37e compare
MMP_RS03450 -3.8 -2.5 glycine synthesis protein GlyXS (from data) compare
MMP_RS07390 -3.8 -3.1 cell division protein FtsZ compare
MMP_RS02010 -3.8 -13.2 PHP domain-containing protein compare
MMP_RS00915 -3.8 -8.6 DUF116 domain-containing protein compare
MMP_RS08720 -3.7 -1.8 4Fe-4S binding protein compare
MMP_RS02670 -3.7 -16.0 ATP-binding cassette domain-containing protein compare
MMP_RS07555 -3.7 -0.9 monovalent cation/H+ antiporter subunit E compare
MMP_RS02680 -3.6 -8.9 ABC transporter permease compare
MMP_RS00555 -3.6 -9.2 MFS transporter compare
MMP_RS01830 -3.6 -1.9 tRNA-Val compare
MMP_RS00040 -3.6 -7.0 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS02145 -3.6 -10.5 winged helix-turn-helix transcriptional regulator compare
MMP_RS02730 -3.5 -13.3 ModD protein compare
MMP_RS04890 -3.5 -1.0 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS01610 -3.5 -3.5 hypothetical protein compare
MMP_RS06400 -3.4 -1.7 4Fe-4S binding protein compare
MMP_RS05925 -3.4 -4.8 small nuclear ribonucleoprotein compare
MMP_RS07200 -3.4 -8.6 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS01020 -3.4 -1.3 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS03640 -3.4 -4.6 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS03475 -3.4 -0.7 hypothetical protein compare
MMP_RS04955 -3.4 -9.0 DNA topoisomerase I compare
MMP_RS03035 -3.4 -4.4 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS08210 -3.4 -2.5 phosphatidylglycerophosphatase A compare
MMP_RS04215 -3.3 -10.0 nickel pincer cofactor biosynthesis protein LarB compare
MMP_RS08650 -3.3 -4.6 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS08715 -3.3 -2.4 formylmethanofuran dehydrogenase subunit B compare
MMP_RS07635 -3.3 -9.5 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS07435 -3.3 -2.1 GMP synthase subunit A compare
MMP_RS07445 -3.3 -8.5 helix-turn-helix domain-containing protein compare
MMP_RS02800 -3.2 -8.5 nucleotidyltransferase domain-containing protein compare
MMP_RS06730 -3.2 -1.7 phosphopantothenate/pantothenate synthetase compare
MMP_RS01545 -3.2 -1.1 CBS domain-containing protein compare
MMP_RS01455 -3.2 -9.0 nickel pincer cofactor biosynthesis protein LarC compare
MMP_RS06270 -3.1 -6.2 TIGR00300 family protein compare
MMP_RS06375 -3.1 -6.9 ATP-dependent sacrificial sulfur transferase LarE compare
MMP_RS03315 -3.1 -1.4 ferrous iron transport protein A compare
MMP_RS01265 -3.1 -3.1 hypothetical protein compare
MMP_RS07525 -3.1 -11.4 4Fe-4S binding protein compare
MMP_RS00730 -3.1 -5.7 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS07185 -3.1 -13.7 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS06725 -3.1 -13.0 hypothetical protein compare
MMP_RS07605 -3.0 -4.4 diadenylate cyclase compare
MMP_RS06625 -3.0 -2.1 DNA primase compare
MMP_RS00735 -3.0 -4.0 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS00455 -3.0 -9.0 orotate phosphoribosyltransferase-like protein compare
MMP_RS02240 -3.0 -3.6 methanogenesis marker 7 protein compare
MMP_RS03960 -3.0 -1.8 hypothetical protein compare
MMP_RS06285 -3.0 -2.8 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS06395 -3.0 -4.2 ThiF family adenylyltransferase compare
MMP_RS00310 -3.0 -10.2 CBS domain-containing protein compare
MMP_RS00895 -3.0 -3.9 hypothetical protein compare
MMP_RS00810 -2.9 -8.0 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS02235 -2.9 -13.0 CBS domain-containing protein compare
MMP_RS08860 -2.9 -5.8 MinD/ParA family protein compare
MMP_RS06340 -2.9 -8.2 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS04850 -2.9 -18.9 UPF0254 family protein compare
MMP_RS05425 -2.9 -5.5 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS07700 -2.8 -13.7 DUF1188 domain-containing protein compare
MMP_RS00985 -2.8 -4.4 CDC48 family AAA ATPase compare
MMP_RS08300 -2.8 -1.0 metal-sulfur cluster assembly factor compare
MMP_RS01885 -2.8 -11.0 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS07695 -2.8 -9.5 DUF3236 domain-containing protein compare
MMP_RS06230 -2.8 -2.8 helix-turn-helix domain-containing protein compare
MMP_RS04780 -2.8 -3.7 ribonuclease P compare
MMP_RS01225 -2.8 -6.2 DUF5379 domain-containing protein compare
MMP_RS02340 -2.7 -1.8 DNA-directed RNA polymerase subunit E'' compare
MMP_RS08570 -2.7 -12.2 coenzyme F420-0:L-glutamate ligase compare
MMP_RS06325 -2.7 -1.5 hypothetical protein compare
MMP_RS07365 -2.7 -12.6 2-phosphoglycerate kinase compare
MMP_RS04585 -2.7 -12.2 AIR synthase related protein compare
MMP_RS02875 -2.7 -11.4 chorismate pyruvate-lyase family protein compare
MMP_RS01700 -2.7 -0.8 dihydroxy-acid dehydratase compare
MMP_RS01380 -2.6 -5.5 PHP domain-containing protein compare
MMP_RS01220 -2.6 -7.8 hypothetical protein compare
MMP_RS07380 -2.6 -2.3 transcription elongation factor Spt5 compare
MMP_RS07090 -2.6 -9.7 tRNA (adenine-N1)-methyltransferase compare
MMP_RS02195 -2.6 -4.5 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS09020 -2.5 -1.7 hypothetical protein compare
MMP_RS03205 -2.5 -1.8 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS08790 -2.5 -1.8 translation initiation factor IF-2 subunit alpha compare
MMP_RS00725 -2.5 -9.0 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS01725 -2.5 -5.7 class I SAM-dependent methyltransferase family protein compare
MMP_RS01875 -2.5 -14.3 N-acetyltransferase compare
MMP_RS00900 -2.5 -2.4 50S ribosomal protein L39e compare
MMP_RS05930 -2.5 -1.9 3-isopropylmalate dehydratase large subunit compare
MMP_RS06295 -2.5 -8.1 methanogenesis marker 14 protein compare
MMP_RS07535 -2.5 -9.6 4Fe-4S binding protein compare
MMP_RS00115 -2.5 -13.6 radical SAM protein compare
MMP_RS05430 -2.4 -6.4 TIGR00288 family NYN domain-containing protein compare
MMP_RS01365 -2.4 -3.7 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS08500 -2.4 -5.5 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMP_RS01925 -2.4 -10.7 DUF1616 domain-containing protein compare
MMP_RS01755 -2.4 -1.1 DUF2097 domain-containing protein compare
MMP_RS03700 -2.4 -9.5 sodium:proton antiporter compare
MMP_RS08645 -2.4 -8.4 UPF0179 family protein compare
MMP_RS07075 -2.4 -5.0 phosphomannomutase/phosphoglucomutase compare
MMP_RS01880 -2.4 -9.5 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS06020 -2.4 -5.0 archaeoflavoprotein AfpA compare
MMP_RS02175 -2.4 -1.0 DUF1611 domain-containing protein compare
MMP_RS08820 -2.4 -4.9 hypothetical protein compare
MMP_RS03025 -2.3 -5.9 molybdenum cofactor guanylyltransferase compare
MMP_RS03580 -2.3 -3.6 signal recognition particle-docking protein FtsY compare
MMP_RS06855 -2.3 -9.6 hypothetical protein compare
MMP_RS00315 -2.3 -6.9 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS01180 -2.3 -2.2 XTP/dITP diphosphatase compare
MMP_RS02870 -2.3 -9.7 hypothetical protein compare
MMP_RS06315 -2.3 -0.9 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS06925 -2.3 -2.4 ribonuclease VapC4 compare
MMP_RS03110 -2.3 -6.9 glycosyltransferase family 2 protein compare
MMP_RS02345 -2.2 -3.2 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS08225 -2.2 -10.1 RimK family alpha-L-glutamate ligase compare
MMP_RS08660 -2.2 -9.2 DHH family phosphoesterase compare
MMP_RS04790 -2.2 -10.7 4-hydroxy-tetrahydrodipicolinate reductase compare
MMP_RS08155 -2.2 -5.4 hypothetical protein compare
MMP_RS01445 -2.2 -7.9 hypothetical protein compare
MMP_RS06885 -2.2 -2.0 50S ribosome-binding GTPase compare
MMP_RS03555 -2.2 -6.0 transcriptional regulator compare
MMP_RS01900 -2.2 -13.2 hypothetical protein compare
MMP_RS01800 -2.1 -3.9 TIGR00303 family protein compare
MMP_RS07530 -2.1 -8.7 4Fe-4S binding protein compare
MMP_RS08330 -2.1 -6.6 NADH-quinone oxidoreductase subunit H compare
MMP_RS03485 -2.1 -3.6 TIGR00267 family protein compare
MMP_RS03445 -2.1 -1.0 methanogenesis marker 17 protein compare
MMP_RS01385 -2.1 -0.6 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS08745 -2.1 -5.0 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS00955 -2.1 -9.6 coenzyme gamma-F420-2:alpha-L-glutamate ligase compare
MMP_RS06120 -2.1 -2.0 UPF0147 family protein compare
MMP_RS07600 -2.1 -2.4 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS03420 -2.1 -3.2 acetolactate synthase small subunit compare
MMP_RS00300 -2.1 -0.7 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS04720 -2.0 -2.9 DedA family protein compare
MMP_RS05555 -2.0 -1.3 DUF4040 domain-containing protein compare
MMP_RS04685 -2.0 -3.2 DUF126 domain-containing protein compare
MMP_RS05540 -2.0 -2.8 hypothetical protein compare
MMP_RS02245 -2.0 -3.3 hypothetical protein compare
MMP_RS05280 -2.0 -8.8 COG1361 S-layer family protein compare
MMP_RS06670 -2.0 -4.4 glucose-6-phosphate isomerase compare
MMP_RS08705 -2.0 -5.3 sulfopyruvate decarboxylase subunit beta compare
MMP_RS06015 -2.0 -6.2 flavodoxin family protein compare
MMP_RS06900 -1.9 -3.1 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS05460 -1.9 -8.1 YcaO-related McrA-glycine thioamidation protein compare
MMP_RS04870 -1.9 -5.1 TIGR02253 family HAD-type hydrolase compare
MMP_RS04500 -1.9 -12.2 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS08785 -1.9 -1.1 RNA-protein complex protein Nop10 compare
MMP_RS05265 -1.9 -2.2 2-isopropylmalate synthase compare
MMP_RS07575 -1.9 -4.4 RNA ligase partner protein compare
MMP_RS01955 -1.9 -2.8 hypothetical protein compare
MMP_RS00515 -1.9 -0.7 DUF655 domain-containing protein compare
MMP_RS02135 -1.9 -4.3 DUF5612 domain-containing protein compare
MMP_RS00685 -1.9 -3.5 2-phospho-L-lactate guanylyltransferase compare
MMP_RS08195 -1.9 -8.0 hypothetical protein compare
MMP_RS02780 -1.8 -6.7 hypothetical protein compare
MMP_RS08440 -1.8 -2.7 cell division protein SepF compare
MMP_RS01775 -1.8 -1.6 TIGR00297 family protein compare
MMP_RS05535 -1.8 -3.7 hypothetical protein compare
MMP_RS06035 -1.8 -8.1 glycosyltransferase family 2 protein compare
MMP_RS01085 -1.7 -1.8 hypothetical protein compare
MMP_RS04900 -1.7 -11.1 hypothetical protein compare
MMP_RS02930 -1.7 -3.5 class I SAM-dependent methyltransferase compare
MMP_RS01975 -1.7 -10.8 hypothetical protein compare
MMP_RS05845 -1.7 -1.5 tRNA-intron lyase compare
MMP_RS07410 -1.7 -7.3 4-demethylwyosine synthase TYW1 compare
MMP_RS06435 -1.7 -5.1 CBS domain-containing protein compare
MMP_RS07545 -1.6 -0.9 HTH domain-containing protein compare
MMP_RS08095 -1.6 -5.1 dethiobiotin synthase compare
MMP_RS05020 -1.6 -2.8 hypothetical protein compare
MMP_RS05640 -1.6 -5.1 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS01540 -1.6 -1.9 DUF504 domain-containing protein compare
MMP_RS01970 -1.6 -8.4 TIGR04279 domain-containing protein compare
MMP_RS06370 -1.6 -4.2 biotin synthase BioB compare
MMP_RS01665 -1.6 -2.6 DUF2111 domain-containing protein compare
MMP_RS00035 -1.6 -5.0 DUF2098 family protein compare
MMP_RS05285 -1.6 -5.0 MMPL family transporter compare


Specific Phenotypes

For 6 genes in this experiment

For nitrogen source L-Glutamic acid monopotassium salt monohydrate in Methanococcus maripaludis S2

For nitrogen source L-Glutamic acid monopotassium salt monohydrate across organisms