Experiment set10S100 for Methanococcus maripaludis S2

Compare to:

H2 N-free with 10mM L-Aspartic Acid

200 most important genes:

  gene name fitness t score description  
MMP_RS08165 -6.2 -1.8 phosphoglycerate dehydrogenase compare
MMP_RS03450 -5.6 -3.4 glycine synthesis protein GlyXS (from data) compare
MMP_RS07845 -5.2 -3.2 LL-diaminopimelate aminotransferase compare
MMP_RS05550 -5.1 -0.9 cation:proton antiporter compare
MMP_RS04445 -4.9 -12.4 P-II family nitrogen regulator compare
MMP_RS04450 -4.9 -19.4 P-II family nitrogen regulator compare
MMP_RS01175 -4.8 -5.7 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS08715 -4.8 -2.7 formylmethanofuran dehydrogenase subunit B compare
MMP_RS04455 -4.7 -26.5 nitrogenase subunit alpha compare
MMP_RS01020 -4.6 -1.6 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS04470 -4.5 -21.6 nitrogenase compare
MMP_RS05500 -4.5 -11.9 2-isopropylmalate synthase compare
MMP_RS01500 -4.5 -2.9 CBS domain-containing protein compare
MMP_RS04465 -4.4 -20.1 nitrogenase iron-molybdenum cofactor biosynthesis protein NifE compare
MMP_RS03315 -4.4 -2.3 ferrous iron transport protein A compare
MMP_RS04460 -4.4 -24.8 nitrogenase molybdenum-iron protein subunit beta compare
MMP_RS04710 -4.4 -2.8 hypothetical protein compare
MMP_RS07345 -4.3 -8.5 glycine synthesis protein GlyXL (from data) compare
MMP_RS04440 -4.2 -16.7 nitrogenase iron protein compare
MMP_RS00555 -4.2 -9.7 MFS transporter compare
MMP_RS05920 -4.1 -0.7 50S ribosomal protein L37e compare
MMP_RS06400 -4.1 -2.2 4Fe-4S binding protein compare
MMP_RS07635 -4.1 -10.8 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS02670 -3.9 -16.3 ATP-binding cassette domain-containing protein compare
MMP_RS02145 -3.8 -13.7 winged helix-turn-helix transcriptional regulator compare
MMP_RS02010 -3.8 -13.3 PHP domain-containing protein compare
MMP_RS07525 -3.8 -9.2 4Fe-4S binding protein compare
MMP_RS02685 -3.7 -16.3 molybdate ABC transporter substrate-binding protein compare
MMP_RS03435 -3.7 -2.4 ketol-acid reductoisomerase compare
MMP_RS02355 -3.7 -4.2 30S ribosomal protein S27ae compare
MMP_RS07185 -3.6 -16.1 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS03035 -3.6 -6.6 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS00040 -3.5 -7.8 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS03445 -3.5 -1.5 methanogenesis marker 17 protein compare
MMP_RS01455 -3.5 -10.5 nickel pincer cofactor biosynthesis protein LarC compare
MMP_RS02730 -3.5 -12.7 ModD protein compare
MMP_RS02675 -3.4 -3.7 hypothetical protein compare
MMP_RS03960 -3.4 -2.4 hypothetical protein compare
MMP_RS01830 -3.4 -2.6 tRNA-Val compare
MMP_RS01610 -3.4 -5.0 hypothetical protein compare
MMP_RS02680 -3.4 -11.1 ABC transporter permease compare
MMP_RS01545 -3.3 -1.5 CBS domain-containing protein compare
MMP_RS07730 -3.3 -3.0 pyruvate synthase subunit beta compare
MMP_RS07365 -3.3 -16.2 2-phosphoglycerate kinase compare
MMP_RS06625 -3.3 -3.1 DNA primase compare
MMP_RS07445 -3.2 -8.0 helix-turn-helix domain-containing protein compare
MMP_RS08435 -3.2 -3.5 Era-like GTP-binding protein compare
MMP_RS08210 -3.1 -3.3 phosphatidylglycerophosphatase A compare
MMP_RS01225 -3.1 -6.9 DUF5379 domain-containing protein compare
MMP_RS03640 -3.1 -4.1 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS04215 -3.1 -11.6 nickel pincer cofactor biosynthesis protein LarB compare
MMP_RS06270 -3.1 -6.2 TIGR00300 family protein compare
MMP_RS00455 -3.0 -12.8 orotate phosphoribosyltransferase-like protein compare
MMP_RS03110 -3.0 -7.8 glycosyltransferase family 2 protein compare
MMP_RS07605 -3.0 -5.5 diadenylate cyclase compare
MMP_RS08645 -3.0 -11.5 UPF0179 family protein compare
MMP_RS00915 -3.0 -9.8 DUF116 domain-containing protein compare
MMP_RS08650 -3.0 -5.4 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS05930 -2.9 -3.1 3-isopropylmalate dehydratase large subunit compare
MMP_RS06020 -2.9 -5.2 archaeoflavoprotein AfpA compare
MMP_RS08500 -2.9 -7.4 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMP_RS01380 -2.9 -6.1 PHP domain-containing protein compare
MMP_RS04585 -2.9 -13.1 AIR synthase related protein compare
MMP_RS02245 -2.9 -4.7 hypothetical protein compare
MMP_RS08300 -2.9 -1.4 metal-sulfur cluster assembly factor compare
MMP_RS04890 -2.8 -1.5 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS01005 -2.8 -2.0 riboflavin synthase compare
MMP_RS07075 -2.8 -6.2 phosphomannomutase/phosphoglucomutase compare
MMP_RS06375 -2.8 -5.7 ATP-dependent sacrificial sulfur transferase LarE compare
MMP_RS00985 -2.8 -6.9 CDC48 family AAA ATPase compare
MMP_RS03700 -2.8 -11.7 sodium:proton antiporter compare
MMP_RS09020 -2.8 -2.7 hypothetical protein compare
MMP_RS06475 -2.8 -6.6 FAD-dependent oxidoreductase compare
MMP_RS01800 -2.8 -5.6 TIGR00303 family protein compare
MMP_RS06295 -2.7 -9.4 methanogenesis marker 14 protein compare
MMP_RS08860 -2.7 -9.2 MinD/ParA family protein compare
MMP_RS04685 -2.7 -4.6 DUF126 domain-containing protein compare
MMP_RS02175 -2.7 -1.4 DUF1611 domain-containing protein compare
MMP_RS07600 -2.7 -3.4 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS00300 -2.7 -1.0 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS05265 -2.7 -3.1 2-isopropylmalate synthase compare
MMP_RS02195 -2.7 -4.5 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS02900 -2.7 -0.8 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS07435 -2.7 -2.4 GMP synthase subunit A compare
MMP_RS02340 -2.7 -2.8 DNA-directed RNA polymerase subunit E'' compare
MMP_RS05430 -2.6 -6.4 TIGR00288 family NYN domain-containing protein compare
MMP_RS06725 -2.6 -12.8 hypothetical protein compare
MMP_RS04870 -2.6 -7.9 TIGR02253 family HAD-type hydrolase compare
MMP_RS08720 -2.6 -1.9 4Fe-4S binding protein compare
MMP_RS04900 -2.6 -17.2 hypothetical protein compare
MMP_RS06285 -2.6 -3.3 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS04780 -2.5 -4.3 ribonuclease P compare
MMP_RS04790 -2.5 -12.0 4-hydroxy-tetrahydrodipicolinate reductase compare
MMP_RS02240 -2.5 -3.9 methanogenesis marker 7 protein compare
MMP_RS00310 -2.5 -9.0 CBS domain-containing protein compare
MMP_RS06120 -2.5 -2.8 UPF0147 family protein compare
MMP_RS00810 -2.5 -8.4 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS02800 -2.5 -6.2 nucleotidyltransferase domain-containing protein compare
MMP_RS05925 -2.5 -4.9 small nuclear ribonucleoprotein compare
MMP_RS01385 -2.4 -0.9 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS04090 -2.4 -3.9 hypothetical protein compare
MMP_RS06855 -2.4 -10.7 hypothetical protein compare
MMP_RS07735 -2.4 -0.6 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS01220 -2.4 -10.3 hypothetical protein compare
MMP_RS03580 -2.3 -4.3 signal recognition particle-docking protein FtsY compare
MMP_RS00725 -2.3 -9.2 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS00730 -2.3 -7.2 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS08440 -2.3 -3.5 cell division protein SepF compare
MMP_RS01325 -2.3 -3.0 dihydroneopterin aldolase family protein compare
MMP_RS08195 -2.3 -12.6 hypothetical protein compare
MMP_RS01265 -2.3 -2.8 hypothetical protein compare
MMP_RS04850 -2.2 -16.7 UPF0254 family protein compare
MMP_RS02345 -2.2 -4.9 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS03025 -2.2 -5.8 molybdenum cofactor guanylyltransferase compare
MMP_RS07390 -2.2 -3.5 cell division protein FtsZ compare
MMP_RS05515 -2.2 -5.2 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS06395 -2.1 -4.2 ThiF family adenylyltransferase compare
MMP_RS08570 -2.1 -9.3 coenzyme F420-0:L-glutamate ligase compare
MMP_RS01725 -2.1 -4.2 class I SAM-dependent methyltransferase family protein compare
MMP_RS07695 -2.1 -6.2 DUF3236 domain-containing protein compare
MMP_RS05540 -2.1 -3.2 hypothetical protein compare
MMP_RS03600 -2.1 -2.0 triose-phosphate isomerase compare
MMP_RS07700 -2.1 -9.9 DUF1188 domain-containing protein compare
MMP_RS06730 -2.1 -1.7 phosphopantothenate/pantothenate synthetase compare
MMP_RS07545 -2.1 -1.5 HTH domain-containing protein compare
MMP_RS07355 -2.0 -1.1 transcription factor S compare
MMP_RS07200 -2.0 -7.3 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS07090 -2.0 -8.5 tRNA (adenine-N1)-methyltransferase compare
MMP_RS00735 -2.0 -4.4 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS06105 -2.0 -8.0 hydrogenase maturation peptidase HycI compare
MMP_RS06175 -2.0 -6.8 winged helix-turn-helix transcriptional regulator compare
MMP_RS04955 -2.0 -7.1 DNA topoisomerase I compare
MMP_RS08820 -1.9 -7.3 hypothetical protein compare
MMP_RS00320 -1.9 -2.4 class I SAM-dependent methyltransferase compare
MMP_RS00895 -1.9 -5.6 hypothetical protein compare
MMP_RS06670 -1.9 -5.4 glucose-6-phosphate isomerase compare
MMP_RS07380 -1.9 -2.3 transcription elongation factor Spt5 compare
MMP_RS00115 -1.9 -11.4 radical SAM protein compare
MMP_RS01925 -1.9 -9.9 DUF1616 domain-containing protein compare
MMP_RS05250 -1.9 -2.0 NFYB/HAP3 family transcription factor subunit compare
MMP_RS03090 -1.8 -7.3 cation:proton antiporter compare
MMP_RS01085 -1.8 -2.6 hypothetical protein compare
MMP_RS06630 -1.8 -1.1 UPF0058 family protein compare
MMP_RS05425 -1.8 -5.1 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS01755 -1.8 -1.0 DUF2097 domain-containing protein compare
MMP_RS03205 -1.8 -1.8 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS01875 -1.8 -9.8 N-acetyltransferase compare
MMP_RS07555 -1.8 -1.1 monovalent cation/H+ antiporter subunit E compare
MMP_RS07535 -1.8 -8.7 4Fe-4S binding protein compare
MMP_RS07575 -1.8 -4.1 RNA ligase partner protein compare
MMP_RS08660 -1.8 -8.8 DHH family phosphoesterase compare
MMP_RS08155 -1.8 -6.8 hypothetical protein compare
MMP_RS08330 -1.8 -6.2 NADH-quinone oxidoreductase subunit H compare
MMP_RS06350 -1.8 -6.3 HesA/MoeB/ThiF family protein compare
MMP_RS02780 -1.8 -5.7 hypothetical protein compare
MMP_RS01880 -1.7 -7.9 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS05020 -1.7 -5.6 hypothetical protein compare
MMP_RS01900 -1.7 -11.6 hypothetical protein compare
MMP_RS07710 -1.7 -7.7 cell division protein FtsZ compare
MMP_RS00685 -1.7 -3.6 2-phospho-L-lactate guanylyltransferase compare
MMP_RS04875 -1.7 -4.9 energy-converting hydrogenase B subunit P compare
MMP_RS00315 -1.7 -7.8 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS05345 -1.7 -6.6 hypothetical protein compare
MMP_RS01445 -1.7 -6.4 hypothetical protein compare
MMP_RS06355 -1.7 -1.7 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS05640 -1.6 -7.5 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS06840 -1.6 -1.1 DNA-directed RNA polymerase subunit N compare
MMP_RS03015 -1.6 -4.7 GTP 3' 8-cyclase MoaA compare
MMP_RS01885 -1.6 -7.2 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS07005 -1.6 -0.7 4Fe-4S binding protein compare
MMP_RS06900 -1.6 -3.5 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS03440 -1.6 -1.5 MoaD/ThiS family protein compare
MMP_RS00110 -1.6 -2.3 hypothetical protein compare
MMP_RS08705 -1.6 -5.0 sulfopyruvate decarboxylase subunit beta compare
MMP_RS00035 -1.6 -4.8 DUF2098 family protein compare
MMP_RS06865 -1.6 -2.4 HypC/HybG/HupF family hydrogenase formation chaperone compare
MMP_RS08790 -1.5 -2.0 translation initiation factor IF-2 subunit alpha compare
MMP_RS04605 -1.5 -4.6 cobalt ECF transporter T component CbiQ compare
MMP_RS01795 -1.5 -1.5 methanogenesis marker 6 protein compare
MMP_RS01700 -1.5 -0.7 dihydroxy-acid dehydratase compare
MMP_RS07755 -1.5 -1.4 DUF555 domain-containing protein compare
MMP_RS05555 -1.5 -1.4 DUF4040 domain-containing protein compare
MMP_RS05440 -1.5 -6.6 winged helix-turn-helix transcriptional regulator compare
MMP_RS03485 -1.5 -4.2 TIGR00267 family protein compare
MMP_RS01665 -1.5 -2.7 DUF2111 domain-containing protein compare
MMP_RS05765 -1.5 -3.9 M42 family metallopeptidase compare
MMP_RS00520 -1.5 -1.5 RNA polymerase Rpb4 family protein compare
MMP_RS07415 -1.4 -4.6 molybdopterin-guanine dinucleotide biosynthesis protein MobB compare
MMP_RS02190 -1.4 -2.3 sulfopyruvate decarboxylase subunit alpha compare
MMP_RS06925 -1.4 -2.1 ribonuclease VapC4 compare
MMP_RS05460 -1.4 -6.7 YcaO-related McrA-glycine thioamidation protein compare
MMP_RS05280 -1.4 -6.0 COG1361 S-layer family protein compare
MMP_RS04720 -1.4 -2.4 DedA family protein compare
MMP_RS01905 -1.4 -10.0 glycosyltransferase compare
MMP_RS07750 -1.4 -4.2 DUF357 domain-containing protein compare
MMP_RS04615 -1.4 -2.0 PDGLE domain-containing protein compare
MMP_RS07875 -1.4 -5.0 hypothetical protein compare
MMP_RS06340 -1.4 -5.7 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS03535 -1.4 -2.4 helix-turn-helix transcriptional regulator compare
MMP_RS03475 -1.4 -0.7 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in nitrogen source experiments

For nitrogen source L-Aspartic Acid across organisms