Experiment set10IT094 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 0.5x

200 most important genes:

  gene name fitness t score description  
BWI76_RS21475 -7.5 -5.2 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS11965 -7.4 -5.1 orotidine-5'-phosphate decarboxylase compare
BWI76_RS04160 -6.9 -6.8 phosphoserine phosphatase compare
BWI76_RS20355 -6.3 -4.9 colicin V production protein compare
BWI76_RS04465 -6.3 -4.3 carbamoyl-phosphate synthase small subunit compare
BWI76_RS27385 -6.0 -4.1 orotate phosphoribosyltransferase compare
BWI76_RS23360 -6.0 -4.1 diaminopimelate decarboxylase compare
BWI76_RS01610 -5.8 -6.1 phosphoribosylamine--glycine ligase compare
BWI76_RS26085 -5.7 -3.9 3-dehydroquinate synthase compare
BWI76_RS01615 -5.5 -9.2 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS20895 -5.3 -6.3 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS23920 -5.2 -6.2 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS04470 -5.2 -10.5 carbamoyl phosphate synthase large subunit compare
BWI76_RS18950 -5.2 -5.3 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS21265 -5.2 -15.1 phosphoribosylformylglycinamidine synthase compare
BWI76_RS02995 -5.1 -9.2 aspartate carbamoyltransferase compare
BWI76_RS25645 -5.0 -7.5 shikimate dehydrogenase compare
BWI76_RS23240 -4.9 -3.4 exonuclease V subunit gamma compare
BWI76_RS07065 -4.9 -8.7 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS23365 -4.8 -6.1 LysR family transcriptional regulator compare
BWI76_RS00855 -4.7 -11.0 argininosuccinate lyase compare
BWI76_RS04255 -4.7 -11.8 threonine synthase compare
BWI76_RS05835 -4.7 -3.8 gamma-glutamyl-phosphate reductase compare
BWI76_RS20965 -4.7 -6.3 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS00990 -4.6 -10.3 ketol-acid reductoisomerase compare
BWI76_RS09910 -4.6 -18.0 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS18935 -4.6 -9.1 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS02735 -4.6 -6.2 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS20350 -4.5 -6.3 amidophosphoribosyltransferase compare
BWI76_RS08385 -4.5 -4.3 citrate (Si)-synthase compare
BWI76_RS01200 -4.4 -3.0 diaminopimelate epimerase compare
BWI76_RS09760 -4.3 -5.9 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS00835 -4.3 -14.6 phosphoenolpyruvate carboxylase compare
BWI76_RS23230 -4.3 -2.9 exodeoxyribonuclease V subunit beta compare
BWI76_RS00965 -4.2 -1.9 acetolactate synthase 2 small subunit compare
BWI76_RS04250 -4.2 -8.9 homoserine kinase compare
BWI76_RS01210 -4.2 -5.3 tyrosine recombinase XerC compare
BWI76_RS18930 -4.1 -5.4 histidinol-phosphate transaminase compare
BWI76_RS25115 -4.1 -7.5 argininosuccinate synthase compare
BWI76_RS18925 -4.1 -8.8 histidinol dehydrogenase compare
BWI76_RS18920 -4.1 -3.9 ATP phosphoribosyltransferase compare
BWI76_RS27390 -3.9 -5.0 ribonuclease PH compare
BWI76_RS07070 -3.8 -5.0 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS22690 -3.8 -4.7 adenylyl-sulfate kinase compare
BWI76_RS09755 -3.8 -9.6 phosphoserine transaminase compare
BWI76_RS18940 -3.7 -4.1 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS00850 -3.7 -11.7 acetylglutamate kinase compare
BWI76_RS00805 -3.6 -5.5 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS05840 -3.6 -6.4 glutamate 5-kinase compare
BWI76_RS00975 -3.5 -8.7 dihydroxy-acid dehydratase compare
BWI76_RS10990 -3.5 -2.0 dihydroorotase compare
BWI76_RS04645 -3.5 -5.4 3-dehydroquinase compare
BWI76_RS09970 -3.4 -4.6 porin OmpA compare
BWI76_RS04245 -3.4 -13.9 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS23220 -3.4 -9.2 amino-acid N-acetyltransferase compare
BWI76_RS00400 -3.3 -2.2 glutamine synthetase compare
BWI76_RS22755 -3.3 -7.5 phosphoadenosine phosphosulfate reductase compare
BWI76_RS04240 -3.3 -2.8 thr operon leader peptide compare
BWI76_RS03010 -3.3 -7.9 ornithine carbamoyltransferase compare
BWI76_RS00980 -3.3 -12.1 PLP-dependent threonine dehydratase compare
BWI76_RS00845 -3.3 -10.0 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS01655 -3.2 -6.8 homoserine O-succinyltransferase compare
BWI76_RS20435 -3.2 -1.9 chorismate synthase compare
BWI76_RS22760 -3.2 -9.9 sulfite reductase subunit beta compare
BWI76_RS04665 -3.2 -19.5 3-isopropylmalate dehydratase small subunit compare
BWI76_RS01800 -3.1 -5.4 glucose-6-phosphate isomerase compare
BWI76_RS22765 -3.0 -13.2 sulfite reductase subunit alpha compare
BWI76_RS05570 -2.9 -1.8 hypothetical protein compare
BWI76_RS04670 -2.8 -9.6 3-isopropylmalate dehydratase large subunit compare
BWI76_RS09645 -2.8 -2.5 thioredoxin-disulfide reductase compare
BWI76_RS05200 -2.8 -3.2 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS09660 -2.8 -4.1 DNA translocase FtsK compare
BWI76_RS04675 -2.7 -5.2 3-isopropylmalate dehydrogenase compare
BWI76_RS26000 -2.7 -8.0 aspartate aminotransferase family protein compare
BWI76_RS00785 -2.5 -6.6 cystathionine gamma-synthase compare
BWI76_RS11850 -2.4 -7.4 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS21480 -2.4 -6.2 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BWI76_RS04680 -2.3 -8.3 2-isopropylmalate synthase compare
BWI76_RS18955 -2.2 -3.3 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS11845 -2.2 -3.6 tryptophan synthase subunit beta compare
BWI76_RS09655 -2.2 -6.0 leucine-responsive regulatory protein compare
BWI76_RS04685 -2.1 -5.6 putative leucine operon leader peptide compare
BWI76_RS06340 -2.1 -1.3 hypothetical protein compare
BWI76_RS21370 -2.0 -1.6 ATP-dependent RNA helicase SrmB compare
BWI76_RS25335 -2.0 -3.0 stringent starvation protein A compare
BWI76_RS27875 -1.9 -2.2 membrane protein compare
BWI76_RS26570 -1.9 -2.4 anion permease compare
BWI76_RS26055 -1.8 -7.2 siroheme synthase compare
BWI76_RS21465 -1.8 -4.0 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS17720 -1.8 -1.6 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS04530 -1.8 -2.8 peptidylprolyl isomerase SurA compare
BWI76_RS11855 -1.7 -4.3 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS00180 -1.7 -2.3 F0F1 ATP synthase subunit epsilon compare
BWI76_RS00985 -1.7 -5.7 transcriptional regulator IlvY compare
BWI76_RS21580 -1.7 -2.1 SsrA-binding protein compare
BWI76_RS15115 -1.7 -6.1 MFS transporter compare
BWI76_RS13560 -1.7 -1.5 amino acid ABC transporter substrate-binding subunit compare
BWI76_RS25065 -1.7 -2.5 polyribonucleotide nucleotidyltransferase compare
BWI76_RS15835 -1.7 -1.7 hypothetical protein compare
BWI76_RS09190 -1.6 -3.8 hypothetical protein compare
BWI76_RS24885 -1.6 -2.1 PTS galactitol transporter subunit IIB compare
BWI76_RS12070 -1.6 -1.5 hypothetical protein compare
BWI76_RS01275 -1.6 -7.2 LysR family transcriptional regulator compare
BWI76_RS15660 -1.6 -1.7 hypothetical protein compare
BWI76_RS21070 -1.6 -1.9 outer membrane protein assembly factor BamB compare
BWI76_RS19870 -1.5 -2.2 malate:quinone oxidoreductase compare
BWI76_RS11860 -1.5 -5.9 anthranilate synthase component I compare
BWI76_RS27915 -1.5 -2.8 YceK/YidQ family lipoprotein compare
BWI76_RS04100 -1.4 -4.2 peptide chain release factor 3 compare
BWI76_RS16315 -1.4 -1.7 SirA-like protein compare
BWI76_RS20640 -1.4 -3.5 cysteine synthase A compare
BWI76_RS04510 -1.4 -2.3 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS11840 -1.4 -2.4 tryptophan synthase subunit alpha compare
BWI76_RS26405 -1.4 -2.1 16S rRNA (guanine(966)-N(2))-methyltransferase compare
BWI76_RS20380 -1.4 -1.2 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS15975 -1.4 -1.2 hypothetical protein compare
BWI76_RS02725 -1.3 -1.5 HxlR family transcriptional regulator compare
BWI76_RS15680 -1.3 -3.6 hypothetical protein compare
BWI76_RS01630 -1.3 -1.5 16S ribosomal RNA compare
BWI76_RS18165 -1.3 -1.7 NUDIX pyrophosphatase compare
BWI76_RS03665 -1.3 -2.5 ABC transporter ATP-binding protein compare
BWI76_RS04715 -1.3 -1.7 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS15850 -1.2 -2.7 DUF1317 domain-containing protein compare
BWI76_RS00355 -1.2 -1.7 DNA polymerase I compare
BWI76_RS20440 -1.2 -1.3 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS22700 -1.2 -4.1 sulfate adenylyltransferase subunit 2 compare
BWI76_RS06535 -1.1 -5.1 endopeptidase La compare
BWI76_RS14915 -1.1 -3.0 hypothetical protein compare
BWI76_RS08980 -1.1 -1.3 DNA starvation/stationary phase protection protein compare
BWI76_RS13720 -1.1 -2.8 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase compare
BWI76_RS24900 -1.1 -1.5 DeoR family transcriptional regulator compare
BWI76_RS24110 -1.1 -1.9 YggU family protein compare
BWI76_RS17290 -1.1 -3.2 formyltetrahydrofolate deformylase compare
BWI76_RS16470 -1.1 -1.3 transcriptional repressor NemR compare
BWI76_RS20900 -1.1 -1.3 outer membrane protein assembly factor BamC compare
BWI76_RS05165 -1.1 -2.1 cobalamin-binding protein compare
BWI76_RS00970 -1.1 -2.3 branched chain amino acid aminotransferase compare
BWI76_RS19215 -1.1 -1.8 proline-specific peptidase compare
BWI76_RS16210 -1.0 -1.7 hypothetical protein compare
BWI76_RS15635 -1.0 -3.0 hypothetical protein compare
BWI76_RS17375 -1.0 -1.6 nitrate ABC transporter, permease protein compare
BWI76_RS23885 -1.0 -1.5 2-octaprenylphenol hydroxylase compare
BWI76_RS23480 -1.0 -6.8 EAL domain-containing protein compare
BWI76_RS22695 -1.0 -2.4 sulfate adenylyltransferase compare
BWI76_RS01220 -1.0 -5.2 DNA-dependent helicase II compare
BWI76_RS05015 -1.0 -1.8 transcriptional regulator compare
BWI76_RS15110 -1.0 -6.6 putative excinuclease ABC subunit A compare
BWI76_RS15015 -1.0 -1.2 DUF2132 domain-containing protein compare
BWI76_RS25425 -1.0 -1.7 arginine repressor compare
BWI76_RS00960 -1.0 -3.2 acetolactate synthase 2 catalytic subunit compare
BWI76_RS10430 -1.0 -2.9 thiol:disulfide interchange protein DsbG compare
BWI76_RS15705 -1.0 -4.7 putative holin protein compare
BWI76_RS06830 -1.0 -2.8 recombination protein RecR compare
BWI76_RS27440 -1.0 -3.2 DNA helicase RecG compare
BWI76_RS24285 -1.0 -4.2 cystathionine beta-lyase compare
BWI76_RS01925 -0.9 -5.8 aromatic amino acid aminotransferase compare
BWI76_RS19935 -0.9 -1.6 hypothetical protein compare
BWI76_RS18785 -0.9 -3.4 exodeoxyribonuclease I compare
BWI76_RS16195 -0.9 -1.1 hypothetical protein compare
BWI76_RS08665 -0.9 -3.6 6-phosphogluconolactonase compare
BWI76_RS18175 -0.9 -1.6 hydrolase compare
BWI76_RS25160 -0.9 -1.7 transcription elongation factor GreA compare
BWI76_RS19690 -0.9 -1.9 LysR family transcriptional regulator compare
BWI76_RS06530 -0.9 -4.4 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS06435 -0.9 -1.7 MFS transporter compare
BWI76_RS25505 -0.9 -4.4 RNase E specificity factor CsrD compare
BWI76_RS01185 -0.9 -1.5 adenylate cyclase compare
BWI76_RS16120 -0.9 -2.0 4-carboxymuconolactone decarboxylase compare
BWI76_RS12050 -0.9 -2.3 hypothetical protein compare
BWI76_RS09690 -0.9 -1.9 dimethyl sulfoxide reductase compare
BWI76_RS15640 -0.9 -5.7 hypothetical protein compare
BWI76_RS20360 -0.9 -1.0 cell division protein DedD compare
BWI76_RS11130 -0.9 -4.9 PTS glucose transporter subunit IIBC compare
BWI76_RS07820 -0.9 -1.1 S-methyl-5-thioribose kinase compare
BWI76_RS16935 -0.9 -0.9 shikimate dehydrogenase compare
BWI76_RS02410 -0.8 -1.3 EF-P beta-lysylation protein EpmB compare
BWI76_RS14075 -0.8 -1.2 TetR family transcriptional regulator compare
BWI76_RS20650 -0.8 -1.2 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS26890 -0.8 -1.1 hypothetical protein compare
BWI76_RS00345 -0.8 -2.3 protein disulfide oxidoreductase DsbA compare
BWI76_RS09650 -0.8 -4.2 hypothetical protein compare
BWI76_RS19700 -0.8 -1.7 deoxyribonuclease IV compare
BWI76_RS19980 -0.8 -2.4 2-keto-3-deoxy-L-rhamnonate aldolase compare
BWI76_RS23970 -0.8 -1.7 mechanosensitive ion channel protein MscS compare
BWI76_RS00390 -0.8 -2.4 two-component system sensor histidine kinase NtrB compare
BWI76_RS16680 -0.8 -2.2 ABC transporter substrate-binding protein compare
BWI76_RS15690 -0.8 -2.2 hypothetical protein compare
BWI76_RS19145 -0.8 -1.3 formate dehydrogenase cytochrome b556 subunit compare
BWI76_RS24575 -0.8 -1.3 hypothetical protein compare
BWI76_RS24955 -0.8 -1.5 hypothetical protein compare
BWI76_RS06765 -0.8 -2.1 transcriptional regulator compare
BWI76_RS22705 -0.8 -3.5 siroheme synthase compare
BWI76_RS09870 -0.8 -4.1 aromatic amino acid aminotransferase compare
BWI76_RS25280 -0.8 -1.4 RNase adaptor protein RapZ compare
BWI76_RS09625 -0.8 -1.0 hypothetical protein compare
BWI76_RS12335 -0.8 -4.0 hypothetical protein compare
BWI76_RS13755 -0.8 -1.2 hypothetical protein compare
BWI76_RS26520 -0.8 -3.2 nickel import ATP-binding protein NikE compare
BWI76_RS15600 -0.8 -1.7 hypothetical protein compare
BWI76_RS20565 -0.7 -1.8 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in exudates experiments

For exudates Brachypodium distachyon 27-day exudates across organisms