Experiment set10IT093 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 0.25x

200 most important genes:

  gene name fitness t score description  
BWI76_RS20895 -6.4 -4.4 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS09755 -6.2 -6.0 phosphoserine transaminase compare
BWI76_RS02995 -6.1 -9.3 aspartate carbamoyltransferase compare
BWI76_RS04160 -6.1 -8.3 phosphoserine phosphatase compare
BWI76_RS21475 -6.0 -7.1 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS26085 -5.8 -4.0 3-dehydroquinate synthase compare
BWI76_RS20350 -5.8 -8.8 amidophosphoribosyltransferase compare
BWI76_RS21265 -5.5 -14.1 phosphoribosylformylglycinamidine synthase compare
BWI76_RS23920 -5.4 -6.3 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS01615 -5.4 -11.0 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS04470 -5.4 -9.7 carbamoyl phosphate synthase large subunit compare
BWI76_RS09760 -5.1 -5.6 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS23360 -5.1 -4.5 diaminopimelate decarboxylase compare
BWI76_RS00990 -5.0 -10.7 ketol-acid reductoisomerase compare
BWI76_RS04645 -5.0 -7.6 3-dehydroquinase compare
BWI76_RS09910 -4.6 -18.2 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS00850 -4.6 -8.9 acetylglutamate kinase compare
BWI76_RS04250 -4.5 -8.6 homoserine kinase compare
BWI76_RS01610 -4.5 -5.5 phosphoribosylamine--glycine ligase compare
BWI76_RS07065 -4.5 -9.1 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS05835 -4.5 -4.3 gamma-glutamyl-phosphate reductase compare
BWI76_RS07070 -4.5 -6.1 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS00835 -4.5 -13.0 phosphoenolpyruvate carboxylase compare
BWI76_RS04255 -4.5 -11.4 threonine synthase compare
BWI76_RS27385 -4.4 -7.3 orotate phosphoribosyltransferase compare
BWI76_RS18930 -4.3 -5.8 histidinol-phosphate transaminase compare
BWI76_RS23240 -4.3 -5.1 exonuclease V subunit gamma compare
BWI76_RS18950 -4.2 -7.0 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS00855 -4.2 -8.6 argininosuccinate lyase compare
BWI76_RS18940 -4.1 -6.2 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS05840 -4.1 -7.3 glutamate 5-kinase compare
BWI76_RS08385 -4.1 -4.8 citrate (Si)-synthase compare
BWI76_RS18925 -4.1 -9.0 histidinol dehydrogenase compare
BWI76_RS04245 -4.1 -16.7 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS09645 -4.0 -2.7 thioredoxin-disulfide reductase compare
BWI76_RS27390 -4.0 -5.5 ribonuclease PH compare
BWI76_RS02735 -3.9 -6.9 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS23230 -3.9 -3.8 exodeoxyribonuclease V subunit beta compare
BWI76_RS18935 -3.9 -9.9 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS00845 -3.8 -11.0 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS20965 -3.7 -6.6 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS25115 -3.7 -10.6 argininosuccinate synthase compare
BWI76_RS01210 -3.6 -7.8 tyrosine recombinase XerC compare
BWI76_RS00975 -3.6 -8.0 dihydroxy-acid dehydratase compare
BWI76_RS20355 -3.6 -5.4 colicin V production protein compare
BWI76_RS22755 -3.5 -10.0 phosphoadenosine phosphosulfate reductase compare
BWI76_RS00400 -3.5 -2.4 glutamine synthetase compare
BWI76_RS25645 -3.5 -7.0 shikimate dehydrogenase compare
BWI76_RS22760 -3.5 -11.6 sulfite reductase subunit beta compare
BWI76_RS03010 -3.4 -8.8 ornithine carbamoyltransferase compare
BWI76_RS22765 -3.4 -12.5 sulfite reductase subunit alpha compare
BWI76_RS00805 -3.4 -6.1 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS23365 -3.4 -8.2 LysR family transcriptional regulator compare
BWI76_RS18920 -3.2 -2.8 ATP phosphoribosyltransferase compare
BWI76_RS11965 -3.1 -2.9 orotidine-5'-phosphate decarboxylase compare
BWI76_RS04665 -3.1 -19.5 3-isopropylmalate dehydratase small subunit compare
BWI76_RS04465 -3.1 -6.1 carbamoyl-phosphate synthase small subunit compare
BWI76_RS00785 -3.1 -8.7 cystathionine gamma-synthase compare
BWI76_RS23220 -3.1 -10.1 amino-acid N-acetyltransferase compare
BWI76_RS04670 -3.0 -9.9 3-isopropylmalate dehydratase large subunit compare
BWI76_RS18955 -2.9 -6.3 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS26000 -2.8 -9.8 aspartate aminotransferase family protein compare
BWI76_RS00980 -2.7 -10.2 PLP-dependent threonine dehydratase compare
BWI76_RS04675 -2.7 -8.8 3-isopropylmalate dehydrogenase compare
BWI76_RS20435 -2.7 -2.5 chorismate synthase compare
BWI76_RS01655 -2.6 -7.5 homoserine O-succinyltransferase compare
BWI76_RS05200 -2.6 -3.4 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS04240 -2.4 -4.0 thr operon leader peptide compare
BWI76_RS09970 -2.4 -8.0 porin OmpA compare
BWI76_RS02410 -2.4 -2.7 EF-P beta-lysylation protein EpmB compare
BWI76_RS00965 -2.4 -1.9 acetolactate synthase 2 small subunit compare
BWI76_RS10990 -2.3 -2.1 dihydroorotase compare
BWI76_RS04680 -2.2 -11.2 2-isopropylmalate synthase compare
BWI76_RS01800 -2.2 -5.1 glucose-6-phosphate isomerase compare
BWI76_RS15660 -2.2 -2.1 hypothetical protein compare
BWI76_RS21480 -2.2 -5.8 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BWI76_RS04685 -2.2 -6.9 putative leucine operon leader peptide compare
BWI76_RS09660 -2.2 -3.7 DNA translocase FtsK compare
BWI76_RS11840 -2.1 -2.8 tryptophan synthase subunit alpha compare
BWI76_RS11845 -2.0 -3.9 tryptophan synthase subunit beta compare
BWI76_RS18605 -2.0 -2.2 oxidoreductase molybdopterin-binding protein compare
BWI76_RS21465 -2.0 -5.7 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS22690 -1.9 -3.3 adenylyl-sulfate kinase compare
BWI76_RS26570 -1.9 -3.8 anion permease compare
BWI76_RS11850 -1.9 -8.8 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS15835 -1.8 -1.8 hypothetical protein compare
BWI76_RS20650 -1.8 -1.7 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS26055 -1.8 -8.2 siroheme synthase compare
BWI76_RS24285 -1.8 -8.2 cystathionine beta-lyase compare
BWI76_RS00985 -1.6 -5.5 transcriptional regulator IlvY compare
BWI76_RS21140 -1.6 -2.6 molecular chaperone HscA compare
BWI76_RS09655 -1.6 -2.6 leucine-responsive regulatory protein compare
BWI76_RS20440 -1.5 -1.5 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS11635 -1.5 -2.2 ABC transporter compare
BWI76_RS01885 -1.5 -2.1 CsbD family protein compare
BWI76_RS25425 -1.5 -1.9 arginine repressor compare
BWI76_RS04715 -1.5 -3.4 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS27430 -1.4 -1.5 (p)ppGpp synthetase compare
BWI76_RS11855 -1.4 -5.2 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS01220 -1.4 -7.3 DNA-dependent helicase II compare
BWI76_RS11860 -1.4 -6.1 anthranilate synthase component I compare
BWI76_RS16000 -1.3 -1.7 multidrug transporter subunit MdtI compare
BWI76_RS15605 -1.3 -2.8 hypothetical protein compare
BWI76_RS00390 -1.3 -5.2 two-component system sensor histidine kinase NtrB compare
BWI76_RS05450 -1.3 -1.8 ribonuclease HI compare
BWI76_RS23480 -1.3 -7.5 EAL domain-containing protein compare
BWI76_RS20640 -1.2 -3.5 cysteine synthase A compare
BWI76_RS01200 -1.2 -1.9 diaminopimelate epimerase compare
BWI76_RS17720 -1.2 -1.3 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS09190 -1.2 -4.4 hypothetical protein compare
BWI76_RS25335 -1.2 -3.6 stringent starvation protein A compare
BWI76_RS15680 -1.2 -2.8 hypothetical protein compare
BWI76_RS24110 -1.1 -2.1 YggU family protein compare
BWI76_RS15115 -1.1 -5.3 MFS transporter compare
BWI76_RS13250 -1.1 -1.2 cytochrome b561 compare
BWI76_RS15215 -1.1 -1.2 N-acetyltransferase compare
BWI76_RS04510 -1.1 -1.4 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS22700 -1.1 -2.7 sulfate adenylyltransferase subunit 2 compare
BWI76_RS11810 -1.1 -2.1 outer membrane protein OmpW compare
BWI76_RS13445 -1.1 -2.0 alpha/beta hydrolase compare
BWI76_RS22805 -1.1 -6.7 GTP diphosphokinase compare
BWI76_RS00960 -1.1 -4.2 acetolactate synthase 2 catalytic subunit compare
BWI76_RS15850 -1.1 -2.1 DUF1317 domain-containing protein compare
BWI76_RS09195 -1.1 -1.2 N-acetyltransferase compare
BWI76_RS16895 -1.0 -1.7 3-(3-hydroxy-phenyl)propionate transporter MhpT compare
BWI76_RS06765 -1.0 -2.7 transcriptional regulator compare
BWI76_RS00180 -1.0 -1.8 F0F1 ATP synthase subunit epsilon compare
BWI76_RS00970 -1.0 -2.2 branched chain amino acid aminotransferase compare
BWI76_RS15705 -1.0 -3.4 putative holin protein compare
BWI76_RS15830 -1.0 -3.7 hypothetical protein compare
BWI76_RS09330 -1.0 -1.5 baseplate assembly protein V compare
BWI76_RS01275 -0.9 -3.9 LysR family transcriptional regulator compare
BWI76_RS24885 -0.9 -1.8 PTS galactitol transporter subunit IIB compare
BWI76_RS01540 -0.9 -1.9 thiamine biosynthesis protein ThiS compare
BWI76_RS22695 -0.9 -2.7 sulfate adenylyltransferase compare
BWI76_RS11525 -0.9 -1.8 HNH endonuclease compare
BWI76_RS02725 -0.9 -1.3 HxlR family transcriptional regulator compare
BWI76_RS19375 -0.9 -1.9 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
BWI76_RS15645 -0.9 -4.0 gp6 compare
BWI76_RS02530 -0.9 -1.9 tRNA dimethylallyltransferase compare
BWI76_RS18430 -0.9 -1.6 hypothetical protein compare
BWI76_RS00385 -0.9 -4.8 nitrogen assimilation regulatory protein compare
BWI76_RS04530 -0.9 -1.6 peptidylprolyl isomerase SurA compare
BWI76_RS18770 -0.9 -1.2 DNA gyrase inhibitor compare
BWI76_RS09315 -0.9 -1.5 hypothetical protein compare
BWI76_RS20750 -0.9 -1.2 carboxysome structural protein EutK compare
BWI76_RS20970 -0.9 -1.3 phosphoribosylglycinamide formyltransferase compare
BWI76_RS14770 -0.9 -1.3 PTS IIA 2 domain protein compare
BWI76_RS09025 -0.9 -1.4 GntR family transcriptional regulator compare
BWI76_RS11815 -0.9 -1.5 hypothetical protein compare
BWI76_RS14825 -0.9 -2.2 dienelactone hydrolase family protein compare
BWI76_RS13645 -0.8 -1.9 N-hydroxyarylamine O-acetyltransferase compare
BWI76_RS18000 -0.8 -1.7 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF compare
BWI76_RS20490 -0.8 -2.0 hypothetical protein compare
BWI76_RS19010 -0.8 -2.1 polysaccharide pyruvyl transferase yvff compare
BWI76_RS01325 -0.8 -2.2 twin-arginine translocase subunit TatB compare
BWI76_RS11610 -0.8 -2.1 glutamate dehydrogenase compare
BWI76_RS10700 -0.8 -2.8 XRE family transcriptional regulator compare
BWI76_RS18165 -0.8 -1.1 NUDIX pyrophosphatase compare
BWI76_RS07790 -0.8 -1.9 plasmid stabilization protein compare
BWI76_RS12285 -0.8 -2.3 hypothetical protein compare
BWI76_RS02580 -0.8 -0.9 23S rRNA (guanosine(2251)-2'-O)-methyltransferase compare
BWI76_RS01685 -0.8 -5.5 methionine synthase compare
BWI76_RS18455 -0.8 -1.3 tRNA-Ser compare
BWI76_RS15000 -0.8 -2.7 amino acid ABC transporter ATP-binding protein compare
BWI76_RS12375 -0.8 -2.7 DNA-invertase hin compare
BWI76_RS15110 -0.8 -5.4 putative excinuclease ABC subunit A compare
BWI76_RS15745 -0.8 -1.8 hypothetical protein compare
BWI76_RS07605 -0.8 -2.0 N-acetyltransferase GCN5 compare
BWI76_RS13045 -0.8 -3.0 hypothetical protein compare
BWI76_RS06525 -0.8 -3.6 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS15700 -0.8 -2.0 hypothetical protein compare
BWI76_RS01795 -0.8 -2.4 hypothetical protein compare
BWI76_RS13435 -0.8 -1.3 hypothetical protein compare
BWI76_RS25915 -0.7 -1.8 protein SlyX compare
BWI76_RS26075 -0.7 -2.5 DNA adenine methylase compare
BWI76_RS09650 -0.7 -3.0 hypothetical protein compare
BWI76_RS16920 -0.7 -1.3 3-(2,3-dihydroxyphenyl)propionate dioxygenase compare
BWI76_RS23970 -0.7 -2.2 mechanosensitive ion channel protein MscS compare
BWI76_RS22705 -0.7 -4.0 siroheme synthase compare
BWI76_RS05915 -0.7 -2.5 helix-turn-helix transcriptional regulator compare
BWI76_RS21340 -0.7 -1.4 SoxR reducing system protein RseC compare
BWI76_RS09870 -0.7 -3.1 aromatic amino acid aminotransferase compare
BWI76_RS19025 -0.7 -5.0 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) compare
BWI76_RS12345 -0.7 -2.4 nitrite transporter compare
BWI76_RS17775 -0.7 -2.5 hypothetical protein compare
BWI76_RS15435 -0.7 -1.2 hypothetical protein compare
BWI76_RS21070 -0.7 -1.2 outer membrane protein assembly factor BamB compare
BWI76_RS21685 -0.7 -1.2 hypothetical protein compare
BWI76_RS23485 -0.7 -3.6 hypothetical protein compare
BWI76_RS13130 -0.7 -1.5 phenylacetic acid degradation protein PaaD compare
BWI76_RS25320 -0.7 -3.7 glutamate synthase compare
BWI76_RS13965 -0.7 -1.7 binding-protein-dependent transport system inner membrane protein compare
BWI76_RS09555 -0.7 -1.6 pyruvate oxidase compare
BWI76_RS12410 -0.7 -3.5 hypothetical protein compare
BWI76_RS15715 -0.7 -1.7 putative ninG protein compare
BWI76_RS00355 -0.7 -1.6 DNA polymerase I compare
BWI76_RS15635 -0.7 -3.1 hypothetical protein compare
BWI76_RS13990 -0.7 -2.3 allophanate hydrolase compare
BWI76_RS08275 -0.7 -0.7 LexA regulated protein compare


Specific Phenotypes

For 2 genes in this experiment

For exudates Brachypodium distachyon 27-day exudates in Klebsiella michiganensis M5al

For exudates Brachypodium distachyon 27-day exudates across organisms