Experiment set10IT093 for Bacteroides thetaiotaomicron VPI-5482

Compare to:

Varel_Bryant_medium_Glucose with Dimethyl Sulfoxide 0.2 vol%

200 most important genes:

  gene name fitness t score description  
BT2074 -4.1 -4.9 ketol-acid reductoisomerase (NCBI ptt file) compare
BT3761 -3.9 -2.7 N-succinylglutamate synthase (from data) compare
BT2402 -3.8 -9.9 homoserine phosphotransferase HomK (from data) compare
BT1857 -3.8 -4.5 3-isopropylmalate dehydrogenase (NCBI ptt file) compare
BT1377 -3.8 -2.6 phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphohydrolase (NCBI ptt file) compare
BT3759 -3.7 -7.5 N-succinylglutamylphosphate reductase (EC 1.2.1.-) (from data) compare
BT3733 -3.6 -10.4 arginosuccinate lyase (EC 4.3.2.1) (from data) compare
BT2401 -3.6 -5.9 threonine synthase (NCBI ptt file) compare
BT2403 -3.5 -6.8 aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) (from data) compare
BT3918 -3.5 -4.7 pyridoxal phosphate biosynthetic protein pdxJ (NCBI ptt file) compare
BT3933 -3.5 -4.1 prephenate dehydrogenase (EC 1.3.1.13) (from data) compare
BT1379 -3.4 -3.3 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
BT0532 -3.4 -3.3 anthranilate synthase component I (NCBI ptt file) compare
BT1983 -3.4 -6.9 hemolysin III (NCBI ptt file) compare
BT3184 -3.4 -15.4 L-aspartate oxidase (NCBI ptt file) compare
BT1374 -3.4 -2.3 diaminopimelate decarboxylase (EC 4.1.1.20) (from data) compare
BT3757 -3.3 -7.6 pyrroline-5-carboxylate reductase (EC 1.5.1.2) (from data) compare
BT0892 -3.3 -2.2 dihydroorotate dehydrogenase (NCBI ptt file) compare
BT2415 -3.3 -11.8 aspartate aminotransferase (NCBI ptt file) compare
BT3395 -3.3 -8.3 N-succinylglutamate kinase (EC 2.7.2.-) (from data) compare
BT1860 -3.2 -4.9 3-isopropylmalate dehydratase large subunit (NCBI ptt file) compare
BT3718 -3.2 -10.3 gamma-glutamyl phosphate reductase (NCBI ptt file) compare
BT0202 -3.2 -3.1 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) compare
BT1861 -3.2 -4.9 2-isopropylmalate synthase (EC 2.3.3.13) (from data) compare
BT0531 -3.2 -2.2 anthranilate synthase component II (NCBI ptt file) compare
BT0528 -3.2 -2.2 phosphoribosylanthranilate isomerase (EC 5.3.1.24) (from data) compare
BT3193 -3.1 -14.3 putative coenzyme A transferase (NCBI ptt file) compare
BT3361 -3.1 -6.1 erythronate-4-phosphate dehydrogenase (NCBI ptt file) compare
BT2837 -3.1 -15.3 2-oxoglutarate synthase subunit korB (NCBI ptt file) compare
BT3549 -3.0 -6.9 N-succinylcitrulline desuccinylase (EC 3.5.1.-) (from data) compare
BT2076 -3.0 -5.4 acetohydroxybutanoate synthase regulatory subunit (EC 2.2.1.6) (from data) compare
BT3760 -3.0 -4.9 arginosuccinate synthetase (EC 6.3.4.5) (from data) compare
BT2078 -2.9 -8.9 dihydroxy-acid dehydratase (NCBI ptt file) compare
BT1859 -2.9 -2.0 3-isopropylmalate dehydratase small subunit (NCBI ptt file) compare
BT3164 -2.8 -9.0 quinolinate synthetase A (NCBI ptt file) compare
BT3320 -2.8 -8.2 dihydrodipicolinate reductase (NCBI ptt file) compare
BT2077 -2.8 -3.3 acetolactate synthase large subunit (NCBI ptt file) compare
BT1607 -2.8 -1.9 methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase (NCBI ptt file) compare
BT1843 -2.7 -4.2 adenylosuccinate synthetase (NCBI ptt file) compare
BT2836 -2.7 -15.7 2-oxoglutarate synthase subunit korA (NCBI ptt file) compare
BT0200 -2.7 -1.8 ATP phosphoribosyltransferase (NCBI ptt file) compare
BT3253 -2.6 -1.8 phosphoribosylamine--glycine ligase (NCBI ptt file) compare
BT1858 -2.6 -5.4 (R)-citramalate synthase (EC 2.3.1.182) (from data) compare
BT3717 -2.5 -4.5 N-succinylornithine carbamoyltransferase (EC 2.1.3.11) (from data) compare
BT2417 -2.5 -1.7 conserved hypothetical protein (NCBI ptt file) compare
BT1270 -2.5 -3.0 putative Na+/H+ antiporter (NCBI ptt file) compare
BT1153 -2.5 -4.2 phosphoserine aminotransferase (NCBI ptt file) compare
BT0201 -2.5 -2.4 histidinol dehydrogenase (NCBI ptt file) compare
BT3758 -2.5 -2.9 N-succinylornithine aminotransferase (EC 2.6.1.81) (from data) compare
BT0530 -2.5 -2.9 anthranilate phosphoribosyltransferase (EC 2.4.2.18) (from data) compare
BT1421 -2.5 -5.9 hypothetical protein (NCBI ptt file) compare
BT0527 -2.5 -2.9 tryptophan synthase alpha chain (NCBI ptt file) compare
BT0876 -2.4 -1.6 conserved hypothetical protein (NCBI ptt file) compare
BT0891 -2.3 -2.1 dihydroorotate dehydrogenase electron transfer subunit (NCBI ptt file) compare
BT0249 -2.3 -1.5 5-methyltetrahydrofolate--homocysteine methyltransferase or methionine synthase (NCBI ptt file) compare
BT3719 -2.3 -4.2 glutamate 5-kinase (EC 2.7.2.11) (from data) compare
BT1375 -2.2 -13.2 aspartokinase (NCBI ptt file) compare
BT1381 -2.2 -4.1 formyltetrahydrofolate deformylase (NCBI ptt file) compare
BT0700 -2.2 -4.3 GTP pyrophosphokinase (NCBI ptt file) compare
BT4339 -2.2 -1.5 glutamine synthetase (NCBI ptt file) compare
BT2418 -2.1 -3.7 hypothetical protein (NCBI ptt file) compare
BT1844 -2.1 -3.9 transcriptional regulator, putative iron uptake regulation protein (NCBI ptt file) compare
BT0533 -2.1 -1.4 tryptophan synthase beta chain (NCBI ptt file) compare
BT3035 -2.1 -11.3 carboxy-terminal processing protease precursor (NCBI ptt file) compare
BT1733 -2.1 -3.1 putative phosphoribosylformylglycinamidine synthase (NCBI ptt file) compare
BT2003 -2.0 -1.9 putative membrane peptidase (NCBI ptt file) compare
BT0529 -2.0 -1.4 indole-3-glycerol phosphate synthase (NCBI ptt file) compare
BT4211 -2.0 -1.4 putative phosphoribosylformylglycinamidine cyclo-ligase (NCBI ptt file) compare
BT0409 -2.0 -2.9 putative short-chain dehydrogenase (NCBI ptt file) compare
BT1970 -1.9 -8.0 glutamate dehydrogenase (NCBI ptt file) compare
BT1476 -1.9 -3.6 aspartate aminotransferase (NCBI ptt file) compare
BT3394 -1.9 -8.0 putative arginine decarboxylase (NCBI ptt file) compare
BT0842 -1.9 -1.7 hypothetical protein (NCBI ptt file) compare
BT1363 -1.9 -1.7 DNA Pol III Epsilon Chain (NCBI ptt file) compare
BT4322 -1.9 -2.1 conserved hypothetical protein, with a diacylglycerol kinase catalytic domain (NCBI ptt file) compare
BT2546 -1.8 -8.3 transcriptional regulator (NCBI ptt file) compare
BT0481 -1.8 -2.1 polysaccharide export outer membrane protein (NCBI ptt file) compare
BT3371 -1.8 -3.1 putative glycosyltransferase yibD (NCBI ptt file) compare
BT1347 -1.7 -3.8 conserved hypothetical protein (NCBI ptt file) compare
BT4562 -1.7 -1.1 hypothetical protein (NCBI ptt file) compare
BT1220 -1.7 -2.1 6-phosphogluconolactonase (NCBI ptt file) compare
BT1564 -1.7 -1.5 conserved hypothetical protein (NCBI ptt file) compare
BT3223 -1.6 -2.2 hypothetical protein (NCBI ptt file) compare
BT0738 -1.6 -2.3 serine hydroxymethyltransferase (NCBI ptt file) compare
BT3373 -1.6 -3.2 spermidine n1-acetyltransferase (NCBI ptt file) compare
BT1419 -1.6 -2.2 hypothetical protein (NCBI ptt file) compare
BT1378 -1.6 -2.1 imidazole glycerol phosphate synthase subunit hisF (NCBI ptt file) compare
BT2080 -1.6 -3.0 L-cysteine desulfidase cdsB (from data) compare
BT1222 -1.6 -1.4 6-phosphogluconate dehydrogenase,decarboxylating (NCBI ptt file) compare
BT1145 -1.5 -1.9 glucose-inhibited division protein (NCBI ptt file) compare
BT3220 -1.5 -7.6 TPR-repeat-containing protein (NCBI ptt file) compare
BT3372 -1.5 -4.1 glycosyltransferase (NCBI ptt file) compare
BT3762 -1.5 -3.3 arginine repressor, transcriptional regulator of arginine metabolism (NCBI ptt file) compare
BT1482 -1.5 -2.5 two-component system response regulator (NCBI ptt file) compare
p5482_02 -1.5 -4.8 hypothetical protein (NCBI) compare
BT1152 -1.5 -1.7 D-3-phosphoglycerate dehydrogenase (NCBI ptt file) compare
BT4191 -1.5 -7.5 hypothetical protein (NCBI ptt file) compare
BT2932 -1.5 -1.9 transcriptional regulator (NCBI ptt file) compare
BT3902 -1.5 -6.8 conserved hypothetical protein (NCBI ptt file) compare
BT2843 -1.5 -3.2 integrase (NCBI ptt file) compare
BT2129 -1.5 -5.0 aspartate--ammonia ligase (NCBI ptt file) compare
BT0702 -1.5 -2.4 chloramphenicol acetyltransferase (CAT-III) (NCBI ptt file) compare
BT4416 -1.4 -2.8 Cu2+ homeostasis protein CutC (NCBI ptt file) compare
BT3980 -1.4 -2.0 hypothetical protein (NCBI ptt file) compare
BT0545 -1.4 -2.0 nitrogen regulatory protein P-II (NCBI ptt file) compare
BT3936 -1.4 -1.6 prephenate and/or arogenate dehydratase (EC 4.2.1.51) (from data) compare
BT2173 -1.4 -5.7 hypothetical protein (NCBI ptt file) compare
BT0927 -1.4 -0.9 two-component system sensor histidine kinase (NCBI ptt file) compare
BT1420 -1.4 -3.3 conserved hypothetical protein (NCBI ptt file) compare
BT3819 -1.4 -3.6 conserved hypothetical protein (NCBI ptt file) compare
BT3904 -1.4 -5.1 conserved hypothetical protein (NCBI ptt file) compare
BT1201 -1.3 -1.9 conserved hypothetical protein (NCBI ptt file) compare
BT1221 -1.3 -3.4 glucose-6-phosphate 1-dehydrogenase (NCBI ptt file) compare
BT0203 -1.3 -1.5 histidine biosynthesis bifunctional protein hisB (NCBI ptt file) compare
BT0723 -1.3 -1.2 hypothetical protein (NCBI ptt file) compare
BT0955 -1.3 -2.9 conserved hypothetical protein, putative membrane protein (NCBI ptt file) compare
BT0231 -1.3 -1.5 excisionase (NCBI ptt file) compare
BT0922 -1.2 -3.1 hypothetical protein (NCBI ptt file) compare
BT1746 -1.2 -1.3 conserved hypothetical protein (NCBI ptt file) compare
BT3376 -1.2 -4.6 nucleotide sugar transaminase (NCBI ptt file) compare
BT1336 -1.2 -2.9 putative translation initiation inhibitor (NCBI ptt file) compare
BT3935 -1.2 -3.0 aminotransferase (NCBI ptt file) compare
BT1984 -1.2 -2.1 transcriptional regulator (NCBI ptt file) compare
BT1565 -1.2 -2.3 hypothetical protein (NCBI ptt file) compare
BT0397 -1.2 -1.0 conserved hypothetical protein (NCBI ptt file) compare
BT2172 -1.2 -6.9 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) compare
BT0603 -1.2 -1.7 conserved hypothetical protein (NCBI ptt file) compare
BT0100 -1.2 -3.4 hypothetical protein (NCBI ptt file) compare
BT1352 -1.2 -2.8 putative glycosyltransferase HI1698 (NCBI ptt file) compare
BT4569 -1.2 -2.3 hypothetical protein (NCBI ptt file) compare
BT3903 -1.2 -4.7 conserved hypothetical protein (NCBI ptt file) compare
BT0087 -1.2 -2.3 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT1341 -1.2 -3.1 UDP-glucose 6-dehydrogenase (NCBI ptt file) compare
BT1837 -1.2 -4.5 putative GTP-binding protein, putative GTPase (NCBI ptt file) compare
BT3211 -1.1 -1.8 conserved hypothetical protein (NCBI ptt file) compare
BT2170 -1.1 -3.7 hypothetical protein (NCBI ptt file) compare
BT1126 -1.1 -2.2 mobilization protein BmgA (NCBI ptt file) compare
BT0453 -1.1 -1.0 N-acylglucosamine 2-epimerase (NCBI ptt file) compare
BT4003 -1.1 -1.9 stationary-phase survival protein SurE (NCBI ptt file) compare
BT4702 -1.1 -1.4 dihydroxynapthoic acid synthetase (NCBI ptt file) compare
BT1588 -1.1 -2.6 conserved hypothetical protein (NCBI ptt file) compare
BT1608 -1.1 -3.8 capsule biosynthesis protein capA (NCBI ptt file) compare
BT1154 -1.1 -1.0 ATP-independent RNA helicase (NCBI ptt file) compare
BT4454 -1.1 -2.6 conserved hypothetical protein (NCBI ptt file) compare
BT4644 -1.1 -2.3 putative anti-sigma factor (NCBI ptt file) compare
BT4258 -1.1 -4.3 putative 5-formyltetrahydrofolate cyclo-ligase (NCBI ptt file) compare
BT3268 -1.1 -1.6 glucose-inhibited division protein A (NCBI ptt file) compare
BT3737 -1.1 -1.3 hypothetical protein (NCBI ptt file) compare
BT0777 -1.1 -1.0 hypothetical protein (NCBI ptt file) compare
BT0882 -1.1 -1.2 conserved hypothetical protein (NCBI ptt file) compare
BT3999 -1.1 -5.3 membrane-bound lytic murein transglycosylase D presursor (NCBI ptt file) compare
BT3979 -1.0 -2.0 putative methyltransferase (NCBI ptt file) compare
BT2206 -1.0 -2.4 Zinc ABC transporter, permease (NCBI ptt file) compare
BT0848 -1.0 -1.9 hypothetical protein (NCBI ptt file) compare
BT1356 -1.0 -2.5 putative capsule polysaccharide export protein (NCBI ptt file) compare
BT3374 -1.0 -4.4 putative carbamoyl-phosphate-synthetase (NCBI ptt file) compare
BT1834 -1.0 -3.2 putative hydrogenase (NCBI ptt file) compare
BT0972 -1.0 -1.2 putative oxidoreductase (NCBI ptt file) compare
BT2153 -1.0 -1.8 putative Fe-S oxidoreductases (NCBI ptt file) compare
BT0448 -1.0 -2.7 conserved hypothetical protein (NCBI ptt file) compare
BT0067 -1.0 -1.4 hypothetical protein (NCBI ptt file) compare
BT2845 -1.0 -4.2 conserved hypothetical protein (NCBI ptt file) compare
BT0793 -1.0 -1.8 xylose isomerase (NCBI ptt file) compare
BT3074 -1.0 -3.9 conserved hypothetical protein (NCBI ptt file) compare
BT0875 -1.0 -3.1 beta-ureidopropionase (NCBI ptt file) compare
BT1193 -1.0 -2.8 conserved hypothetical protein (NCBI ptt file) compare
BT3554 -1.0 -2.4 conserved hypothetical protein (NCBI ptt file) compare
BT1358 -1.0 -1.9 putative transcriptional regulator (NCBI ptt file) compare
BT0033 -1.0 -1.8 hypothetical protein (NCBI ptt file) compare
BT4534 -1.0 -2.0 hypothetical protein (NCBI ptt file) compare
BT0414 -1.0 -1.6 sulfate adenylyltransferase subunit 2 (NCBI ptt file) compare
BT0081 -1.0 -2.3 hypothetical protein (NCBI ptt file) compare
BT3072 -1.0 -4.0 collagenase precursor (NCBI ptt file) compare
BT0999 -1.0 -2.2 putative acetyltransferase (NCBI ptt file) compare
BT1195 -1.0 -1.8 monofunctional biosynthetic peptidoglycan transglycosylase (NCBI ptt file) compare
BT0519 -1.0 -1.7 hypothetical protein (NCBI ptt file) compare
BT2946 -1.0 -0.9 putative glycosyltransferase (NCBI ptt file) compare
BT0967 -1.0 -0.9 hypothetical protein (NCBI ptt file) compare
BT0944 -1.0 -1.2 hypothetical protein (NCBI ptt file) compare
BT3370 -1.0 -0.9 putative glycosyltransferase yibD (NCBI ptt file) compare
BT0771 -1.0 -2.9 1,4-alpha-glucan branching enzyme (isoamylase or pullulanase type II) (NCBI ptt file) compare
BT3840 -0.9 -1.8 putative RNA-binding protein rbpA (NCBI ptt file) compare
BT4778 -0.9 -2.4 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT4018 -0.9 -1.6 hypothetical protein (NCBI ptt file) compare
BT3405 -0.9 -1.9 conserved hypothetical protein (NCBI ptt file) compare
BT0637 -0.9 -2.3 conserved hypothetical protein (NCBI ptt file) compare
BT1559 -0.9 -3.2 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT4511 -0.9 -2.1 hypothetical protein (NCBI ptt file) compare
BT1340 -0.9 -2.5 putative lipopolysaccharide biosynthesis glycosyltransferase (NCBI ptt file) compare
BT2155 -0.9 -3.1 hypothetical protein (NCBI ptt file) compare
BT1055 -0.9 -1.5 pyruvate formate-lyase activating enzyme (NCBI ptt file) compare
BT1972 -0.9 -5.5 phosphoenolpyruvate synthase/pyruvate phosphate dikinase (NCBI ptt file) compare
BT2299 -0.9 -1.3 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT1894 -0.9 -3.4 TPR-repeat-containing proteins (NCBI ptt file) compare
BT0954 -0.9 -2.3 conserved hypothetical protein (NCBI ptt file) compare
BT4590 -0.9 -1.8 conserved hypothetical protein (NCBI ptt file) compare
BT_t17 pseudo-tRNA -0.9 -1.8 tRNA-OTHER (RefSeq) compare
BT0080 -0.9 -1.9 hypothetical protein (NCBI ptt file) compare
BT0783 -0.9 -1.0 hypothetical protein (NCBI ptt file) compare
BT1232 -0.9 -1.2 hypothetical protein (NCBI ptt file) compare


Specific Phenotypes

None in this experiment

For Bacteroides thetaiotaomicron VPI-5482 in stress experiments

For stress Dimethyl Sulfoxide across organisms