Experiment set10IT091 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_glucose with Brachypodium distachyon 13-day exudates 0.25x

200 most important genes:

  gene name fitness t score description  
BWI76_RS04465 -6.5 -4.5 carbamoyl-phosphate synthase small subunit compare
BWI76_RS23920 -6.3 -6.2 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS20350 -6.3 -8.6 amidophosphoribosyltransferase compare
BWI76_RS11965 -6.2 -5.6 orotidine-5'-phosphate decarboxylase compare
BWI76_RS01615 -6.2 -10.3 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS02995 -6.0 -9.2 aspartate carbamoyltransferase compare
BWI76_RS26085 -6.0 -4.1 3-dehydroquinate synthase compare
BWI76_RS21265 -6.0 -15.0 phosphoribosylformylglycinamidine synthase compare
BWI76_RS05835 -5.9 -4.0 gamma-glutamyl-phosphate reductase compare
BWI76_RS09755 -5.9 -7.0 phosphoserine transaminase compare
BWI76_RS20895 -5.9 -5.7 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS20355 -5.8 -3.8 colicin V production protein compare
BWI76_RS04645 -5.7 -6.8 3-dehydroquinase compare
BWI76_RS21475 -5.5 -7.0 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS23360 -5.5 -5.3 diaminopimelate decarboxylase compare
BWI76_RS04470 -5.3 -10.7 carbamoyl phosphate synthase large subunit compare
BWI76_RS00835 -5.2 -19.0 phosphoenolpyruvate carboxylase compare
BWI76_RS09660 -4.9 -3.4 DNA translocase FtsK compare
BWI76_RS04160 -4.9 -6.5 phosphoserine phosphatase compare
BWI76_RS27390 -4.9 -8.7 ribonuclease PH compare
BWI76_RS07070 -4.9 -4.7 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS18925 -4.9 -9.3 histidinol dehydrogenase compare
BWI76_RS00850 -4.8 -10.2 acetylglutamate kinase compare
BWI76_RS27385 -4.8 -8.6 orotate phosphoribosyltransferase compare
BWI76_RS05840 -4.7 -7.1 glutamate 5-kinase compare
BWI76_RS04255 -4.7 -11.7 threonine synthase compare
BWI76_RS01610 -4.6 -7.7 phosphoribosylamine--glycine ligase compare
BWI76_RS02735 -4.6 -6.2 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS20965 -4.5 -6.9 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS07065 -4.5 -10.7 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS09760 -4.5 -5.3 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS00965 -4.5 -2.0 acetolactate synthase 2 small subunit compare
BWI76_RS18950 -4.4 -5.5 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS25645 -4.4 -8.1 shikimate dehydrogenase compare
BWI76_RS04245 -4.3 -17.9 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS23220 -4.2 -8.4 amino-acid N-acetyltransferase compare
BWI76_RS09910 -4.1 -16.9 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS00855 -4.1 -11.9 argininosuccinate lyase compare
BWI76_RS04250 -4.1 -5.4 homoserine kinase compare
BWI76_RS00990 -4.0 -12.0 ketol-acid reductoisomerase compare
BWI76_RS23365 -3.9 -7.6 LysR family transcriptional regulator compare
BWI76_RS23230 -3.9 -4.6 exodeoxyribonuclease V subunit beta compare
BWI76_RS18935 -3.8 -8.6 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS04240 -3.8 -2.4 thr operon leader peptide compare
BWI76_RS00845 -3.8 -12.3 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS18920 -3.7 -4.6 ATP phosphoribosyltransferase compare
BWI76_RS00400 -3.6 -2.4 glutamine synthetase compare
BWI76_RS00975 -3.6 -10.0 dihydroxy-acid dehydratase compare
BWI76_RS10990 -3.6 -2.0 dihydroorotase compare
BWI76_RS22760 -3.6 -13.3 sulfite reductase subunit beta compare
BWI76_RS01200 -3.5 -3.8 diaminopimelate epimerase compare
BWI76_RS18930 -3.5 -7.4 histidinol-phosphate transaminase compare
BWI76_RS05200 -3.5 -3.3 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS03010 -3.5 -9.3 ornithine carbamoyltransferase compare
BWI76_RS22755 -3.5 -10.7 phosphoadenosine phosphosulfate reductase compare
BWI76_RS08385 -3.4 -5.6 citrate (Si)-synthase compare
BWI76_RS18955 -3.4 -7.7 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS00785 -3.3 -7.1 cystathionine gamma-synthase compare
BWI76_RS20435 -3.3 -1.9 chorismate synthase compare
BWI76_RS01210 -3.2 -4.7 tyrosine recombinase XerC compare
BWI76_RS00805 -3.2 -4.6 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS22765 -3.2 -10.3 sulfite reductase subunit alpha compare
BWI76_RS09645 -3.1 -2.8 thioredoxin-disulfide reductase compare
BWI76_RS04670 -3.0 -9.3 3-isopropylmalate dehydratase large subunit compare
BWI76_RS04665 -3.0 -18.4 3-isopropylmalate dehydratase small subunit compare
BWI76_RS23240 -3.0 -5.8 exonuclease V subunit gamma compare
BWI76_RS04675 -3.0 -8.2 3-isopropylmalate dehydrogenase compare
BWI76_RS18940 -2.9 -4.5 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS00980 -2.9 -12.0 PLP-dependent threonine dehydratase compare
BWI76_RS25115 -2.8 -6.8 argininosuccinate synthase compare
BWI76_RS01655 -2.7 -7.7 homoserine O-succinyltransferase compare
BWI76_RS22690 -2.7 -5.2 adenylyl-sulfate kinase compare
BWI76_RS26000 -2.5 -7.2 aspartate aminotransferase family protein compare
BWI76_RS04680 -2.3 -8.0 2-isopropylmalate synthase compare
BWI76_RS21370 -2.2 -1.7 ATP-dependent RNA helicase SrmB compare
BWI76_RS24900 -2.2 -2.5 DeoR family transcriptional regulator compare
BWI76_RS11840 -2.1 -3.6 tryptophan synthase subunit alpha compare
BWI76_RS04685 -2.1 -7.6 putative leucine operon leader peptide compare
BWI76_RS21480 -2.0 -6.9 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BWI76_RS26570 -2.0 -3.4 anion permease compare
BWI76_RS09190 -2.0 -4.9 hypothetical protein compare
BWI76_RS26405 -1.9 -2.6 16S rRNA (guanine(966)-N(2))-methyltransferase compare
BWI76_RS00985 -1.9 -5.7 transcriptional regulator IlvY compare
BWI76_RS26055 -1.7 -7.8 siroheme synthase compare
BWI76_RS25335 -1.7 -4.5 stringent starvation protein A compare
BWI76_RS11855 -1.7 -6.2 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS16315 -1.6 -2.0 SirA-like protein compare
BWI76_RS11850 -1.6 -7.5 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS15835 -1.6 -1.6 hypothetical protein compare
BWI76_RS26620 -1.6 -1.6 Fe-S biogenesis protein NfuA compare
BWI76_RS00355 -1.6 -4.5 DNA polymerase I compare
BWI76_RS15680 -1.6 -4.8 hypothetical protein compare
BWI76_RS11845 -1.5 -3.7 tryptophan synthase subunit beta compare
BWI76_RS20650 -1.5 -2.0 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS09970 -1.5 -6.5 porin OmpA compare
BWI76_RS22805 -1.5 -8.0 GTP diphosphokinase compare
BWI76_RS15115 -1.5 -6.8 MFS transporter compare
BWI76_RS01800 -1.4 -3.4 glucose-6-phosphate isomerase compare
BWI76_RS02410 -1.4 -2.6 EF-P beta-lysylation protein EpmB compare
BWI76_RS17945 -1.4 -2.2 hypothetical protein compare
BWI76_RS27430 -1.4 -1.9 (p)ppGpp synthetase compare
BWI76_RS01220 -1.4 -6.6 DNA-dependent helicase II compare
BWI76_RS20440 -1.4 -1.2 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS04715 -1.3 -3.3 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS24285 -1.3 -7.0 cystathionine beta-lyase compare
BWI76_RS11515 -1.3 -1.7 peptide-methionine (R)-S-oxide reductase compare
BWI76_RS00715 -1.3 -2.7 two-component sensor histidine kinase compare
BWI76_RS00390 -1.2 -3.2 two-component system sensor histidine kinase NtrB compare
BWI76_RS09655 -1.2 -3.2 leucine-responsive regulatory protein compare
BWI76_RS15605 -1.2 -2.5 hypothetical protein compare
BWI76_RS27875 -1.2 -2.1 membrane protein compare
BWI76_RS21465 -1.2 -4.1 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS00180 -1.2 -2.2 F0F1 ATP synthase subunit epsilon compare
BWI76_RS17200 -1.2 -1.7 hypothetical protein compare
BWI76_RS16485 -1.2 -1.5 ribonuclease T compare
BWI76_RS21690 -1.1 -2.6 hypothetical protein compare
BWI76_RS07785 -1.1 -2.5 transcriptional regulator compare
BWI76_RS11860 -1.1 -4.1 anthranilate synthase component I compare
BWI76_RS13755 -1.1 -1.5 hypothetical protein compare
BWI76_RS06535 -1.1 -4.5 endopeptidase La compare
BWI76_RS15660 -1.0 -1.4 hypothetical protein compare
BWI76_RS03045 -1.0 -1.4 hypothetical protein compare
BWI76_RS15950 -1.0 -1.3 dethiobiotin synthase compare
BWI76_RS13560 -1.0 -1.1 amino acid ABC transporter substrate-binding subunit compare
BWI76_RS13980 -1.0 -1.1 hypothetical protein compare
BWI76_RS23480 -1.0 -6.5 EAL domain-containing protein compare
BWI76_RS11440 -1.0 -1.0 hypothetical protein compare
BWI76_RS21395 -1.0 -1.7 DTW domain-containing protein compare
BWI76_RS11200 -0.9 -2.7 transpeptidase compare
BWI76_RS15635 -0.9 -2.6 hypothetical protein compare
BWI76_RS20640 -0.9 -3.6 cysteine synthase A compare
BWI76_RS24885 -0.9 -1.3 PTS galactitol transporter subunit IIB compare
BWI76_RS09315 -0.9 -1.1 hypothetical protein compare
BWI76_RS00960 -0.9 -3.6 acetolactate synthase 2 catalytic subunit compare
BWI76_RS05450 -0.9 -1.6 ribonuclease HI compare
BWI76_RS23915 -0.9 -2.1 5-formyltetrahydrofolate cyclo-ligase compare
BWI76_RS00385 -0.9 -4.2 nitrogen assimilation regulatory protein compare
BWI76_RS27440 -0.9 -3.2 DNA helicase RecG compare
BWI76_RS12235 -0.9 -1.4 hypothetical protein compare
BWI76_RS12280 -0.9 -2.2 hypothetical protein compare
BWI76_RS25315 -0.9 -5.6 glutamate synthase large subunit compare
BWI76_RS12860 -0.9 -1.7 hypothetical protein compare
BWI76_RS12790 -0.9 -1.3 lactate dehydrogenase compare
BWI76_RS13785 -0.9 -0.9 ABC transporter permease compare
BWI76_RS04530 -0.8 -1.7 peptidylprolyl isomerase SurA compare
BWI76_RS06465 -0.8 -1.0 IclR family transcriptional regulator compare
BWI76_RS10575 -0.8 -1.4 polar amino acid ABC transporter permease compare
BWI76_RS18770 -0.8 -1.1 DNA gyrase inhibitor compare
BWI76_RS09650 -0.8 -3.1 hypothetical protein compare
BWI76_RS25935 -0.8 -2.9 glutathione-regulated potassium-efflux system ancillary protein KefG compare
BWI76_RS05025 -0.8 -2.1 2'-5' RNA ligase compare
BWI76_RS01275 -0.8 -3.7 LysR family transcriptional regulator compare
BWI76_RS00010 -0.8 -4.4 DNA replication and repair protein RecF compare
BWI76_RS15830 -0.8 -3.6 hypothetical protein compare
BWI76_RS17720 -0.8 -1.0 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS01170 -0.8 -2.4 uroporphyrinogen-III C-methyltransferase compare
BWI76_RS07790 -0.8 -1.9 plasmid stabilization protein compare
BWI76_RS22700 -0.8 -2.5 sulfate adenylyltransferase subunit 2 compare
BWI76_RS15640 -0.8 -4.2 hypothetical protein compare
BWI76_RS12295 -0.8 -3.9 hypothetical protein compare
BWI76_RS16195 -0.8 -0.7 hypothetical protein compare
BWI76_RS19010 -0.8 -1.7 polysaccharide pyruvyl transferase yvff compare
BWI76_RS26175 -0.8 -3.0 DeoR/GlpR family transcriptional regulator compare
BWI76_RS15015 -0.8 -1.1 DUF2132 domain-containing protein compare
BWI76_RS09560 -0.8 -1.1 DoxX family membrane protein compare
BWI76_RS10725 -0.8 -2.3 hypothetical protein compare
BWI76_RS25960 -0.8 -2.3 NUDIX hydrolase compare
BWI76_RS22695 -0.8 -2.2 sulfate adenylyltransferase compare
BWI76_RS15705 -0.7 -2.8 putative holin protein compare
BWI76_RS01775 -0.7 -1.0 hypothetical protein compare
BWI76_RS13435 -0.7 -1.3 hypothetical protein compare
BWI76_RS02180 -0.7 -1.0 hypothetical protein compare
BWI76_RS23125 -0.7 -1.5 propanediol dehydratase small subunit compare
BWI76_RS15435 -0.7 -1.2 hypothetical protein compare
BWI76_RS15110 -0.7 -5.2 putative excinuclease ABC subunit A compare
BWI76_RS10835 -0.7 -1.2 hypothetical protein compare
BWI76_RS10430 -0.7 -2.6 thiol:disulfide interchange protein DsbG compare
BWI76_RS04510 -0.7 -1.3 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS13990 -0.7 -2.6 allophanate hydrolase compare
BWI76_RS16025 -0.7 -1.7 triphosphoribosyl-dephospho-CoA synthase compare
BWI76_RS20490 -0.7 -1.9 hypothetical protein compare
BWI76_RS26775 -0.7 -3.4 endo-1,4-D-glucanase compare
BWI76_RS09240 -0.7 -2.9 phosphoadenosine phosphosulfate reductase compare
BWI76_RS10625 -0.7 -4.7 hypothetical protein compare
BWI76_RS20360 -0.7 -0.9 cell division protein DedD compare
BWI76_RS05050 -0.7 -2.8 general secretion pathway protein GspL compare
BWI76_RS01685 -0.7 -4.8 methionine synthase compare
BWI76_RS05965 -0.7 -1.6 hypothetical protein compare
BWI76_RS12225 -0.7 -2.1 hypothetical protein compare
BWI76_RS12300 -0.7 -4.0 hypothetical protein compare
BWI76_RS00480 -0.7 -2.5 hypothetical protein compare
BWI76_RS04955 -0.7 -1.5 hypoxanthine phosphoribosyltransferase compare
BWI76_RS18135 -0.6 -2.9 zinc ABC transporter ATP-binding protein ZnuC compare
BWI76_RS26590 -0.6 -2.1 transcriptional regulator compare
BWI76_RS25320 -0.6 -3.4 glutamate synthase compare
BWI76_RS10700 -0.6 -1.8 XRE family transcriptional regulator compare
BWI76_RS21215 -0.6 -2.2 NAGC-like transcriptional regulator compare
BWI76_RS06680 -0.6 -0.8 hypothetical protein compare
BWI76_RS02530 -0.6 -1.2 tRNA dimethylallyltransferase compare
BWI76_RS01350 -0.6 -0.8 NAD(P)H-flavin reductase compare


Specific Phenotypes

For 2 genes in this experiment

For exudates Brachypodium distachyon 13-day exudates in Klebsiella michiganensis M5al

For exudates Brachypodium distachyon 13-day exudates across organisms