Experiment set10IT087 for Klebsiella michiganensis M5al

Compare to:

LB 0.5x with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x

200 most important genes:

  gene name fitness t score description  
BWI76_RS09660 -5.0 -3.5 DNA translocase FtsK compare
BWI76_RS23240 -4.9 -3.4 exonuclease V subunit gamma compare
BWI76_RS09645 -4.2 -2.8 thioredoxin-disulfide reductase compare
BWI76_RS23230 -4.1 -3.9 exodeoxyribonuclease V subunit beta compare
BWI76_RS15115 -3.5 -10.3 MFS transporter compare
BWI76_RS01210 -3.3 -5.9 tyrosine recombinase XerC compare
BWI76_RS09970 -3.2 -1.8 porin OmpA compare
BWI76_RS04715 -3.1 -3.4 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS20435 -2.7 -2.5 chorismate synthase compare
BWI76_RS27875 -2.6 -2.4 membrane protein compare
BWI76_RS16965 -2.5 -2.8 murein lipoprotein compare
BWI76_RS09190 -2.2 -6.2 hypothetical protein compare
BWI76_RS02530 -2.2 -3.2 tRNA dimethylallyltransferase compare
BWI76_RS05200 -2.2 -3.2 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS15110 -2.1 -13.3 putative excinuclease ABC subunit A compare
BWI76_RS08520 -2.0 -2.6 colicin transporter TolQ compare
BWI76_RS04530 -2.0 -2.6 peptidylprolyl isomerase SurA compare
BWI76_RS21070 -2.0 -1.9 outer membrane protein assembly factor BamB compare
BWI76_RS25425 -1.9 -2.3 arginine repressor compare
BWI76_RS26570 -1.8 -3.2 anion permease compare
BWI76_RS00345 -1.8 -4.0 protein disulfide oxidoreductase DsbA compare
BWI76_RS04465 -1.8 -4.0 carbamoyl-phosphate synthase small subunit compare
BWI76_RS15835 -1.8 -1.4 hypothetical protein compare
BWI76_RS08530 -1.7 -4.0 protein TolA compare
BWI76_RS11965 -1.7 -4.1 orotidine-5'-phosphate decarboxylase compare
BWI76_RS21310 -1.6 -1.6 DNA repair protein RecO compare
BWI76_RS18770 -1.6 -1.9 DNA gyrase inhibitor compare
BWI76_RS15660 -1.6 -2.0 hypothetical protein compare
BWI76_RS09910 -1.6 -11.7 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS24945 -1.6 -1.6 glutamine amidotransferase compare
BWI76_RS01220 -1.6 -6.6 DNA-dependent helicase II compare
BWI76_RS26085 -1.5 -1.9 3-dehydroquinate synthase compare
BWI76_RS10990 -1.5 -2.0 dihydroorotase compare
BWI76_RS25065 -1.5 -3.2 polyribonucleotide nucleotidyltransferase compare
BWI76_RS21370 -1.4 -2.5 ATP-dependent RNA helicase SrmB compare
BWI76_RS11635 -1.4 -2.4 ABC transporter compare
BWI76_RS02995 -1.4 -6.3 aspartate carbamoyltransferase compare
BWI76_RS19010 -1.4 -3.1 polysaccharide pyruvyl transferase yvff compare
BWI76_RS20895 -1.4 -4.3 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS25335 -1.4 -3.6 stringent starvation protein A compare
BWI76_RS17975 -1.4 -4.6 tail-specific protease compare
BWI76_RS23265 -1.4 -2.9 hypothetical protein compare
BWI76_RS09635 -1.4 -2.7 amino acid ABC transporter ATP-binding protein compare
BWI76_RS09640 -1.3 -3.8 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS01200 -1.3 -2.0 diaminopimelate epimerase compare
BWI76_RS08525 -1.3 -3.0 colicin transporter compare
BWI76_RS01615 -1.3 -6.9 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS27385 -1.3 -4.5 orotate phosphoribosyltransferase compare
BWI76_RS25060 -1.3 -3.6 lipoprotein NlpI compare
BWI76_RS09755 -1.3 -7.1 phosphoserine transaminase compare
BWI76_RS04470 -1.3 -6.8 carbamoyl phosphate synthase large subunit compare
BWI76_RS26620 -1.3 -1.2 Fe-S biogenesis protein NfuA compare
BWI76_RS18165 -1.3 -1.3 NUDIX pyrophosphatase compare
BWI76_RS20155 -1.2 -1.8 NADH-quinone oxidoreductase subunit I compare
BWI76_RS01540 -1.2 -2.3 thiamine biosynthesis protein ThiS compare
BWI76_RS04160 -1.2 -5.9 phosphoserine phosphatase compare
BWI76_RS10835 -1.2 -1.9 hypothetical protein compare
BWI76_RS15565 -1.2 -4.4 hypothetical protein compare
BWI76_RS08515 -1.2 -2.4 acyl-CoA thioesterase YbgC compare
BWI76_RS08535 -1.2 -2.5 translocation protein TolB compare
BWI76_RS15825 -1.2 -3.4 hypothetical protein compare
BWI76_RS01775 -1.2 -1.2 hypothetical protein compare
BWI76_RS20965 -1.2 -4.0 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS01800 -1.1 -3.2 glucose-6-phosphate isomerase compare
BWI76_RS15830 -1.1 -3.5 hypothetical protein compare
BWI76_RS06475 -1.1 -1.7 protoheme IX farnesyltransferase compare
BWI76_RS26075 -1.1 -2.5 DNA adenine methylase compare
BWI76_RS13595 -1.1 -5.2 transcriptional regulator compare
BWI76_RS09030 -1.1 -4.0 transpeptidase compare
BWI76_RS21265 -1.1 -6.9 phosphoribosylformylglycinamidine synthase compare
BWI76_RS27165 -1.1 -3.8 mannitol-1-phosphate 5-dehydrogenase compare
BWI76_RS08495 -1.1 -4.3 cytochrome bd-I ubiquinol oxidase subunit I compare
BWI76_RS07065 -1.1 -4.1 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS15435 -1.1 -1.7 hypothetical protein compare
BWI76_RS20750 -1.1 -1.3 carboxysome structural protein EutK compare
BWI76_RS20350 -1.0 -4.9 amidophosphoribosyltransferase compare
BWI76_RS26395 -1.0 -3.1 cell division protein FtsE compare
BWI76_RS03190 -1.0 -2.6 hypothetical protein compare
BWI76_RS01115 -1.0 -2.8 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS24120 -1.0 -3.6 YggW family oxidoreductase compare
BWI76_RS15670 -1.0 -2.8 hypothetical protein compare
BWI76_RS01385 -1.0 -1.7 potassium transporter compare
BWI76_RS15215 -1.0 -1.2 N-acetyltransferase compare
BWI76_RS03295 -0.9 -1.9 transposase compare
BWI76_RS15840 -0.9 -2.9 prophage protein compare
BWI76_RS25280 -0.9 -1.6 RNase adaptor protein RapZ compare
BWI76_RS27390 -0.9 -3.6 ribonuclease PH compare
BWI76_RS26775 -0.9 -1.9 endo-1,4-D-glucanase compare
BWI76_RS16920 -0.9 -1.9 3-(2,3-dihydroxyphenyl)propionate dioxygenase compare
BWI76_RS20355 -0.9 -3.0 colicin V production protein compare
BWI76_RS23745 -0.9 -3.4 arsenate reductase compare
BWI76_RS01610 -0.9 -5.2 phosphoribosylamine--glycine ligase compare
BWI76_RS00355 -0.9 -1.7 DNA polymerase I compare
BWI76_RS02180 -0.9 -1.3 hypothetical protein compare
BWI76_RS22805 -0.9 -4.3 GTP diphosphokinase compare
BWI76_RS18695 -0.9 -1.8 GntR family transcriptional regulator compare
BWI76_RS20380 -0.9 -0.9 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS20180 -0.9 -3.6 NADH-quinone oxidoreductase subunit C/D compare
BWI76_RS21350 -0.9 -2.6 anti-RNA polymerase sigma factor SigE compare
BWI76_RS09325 -0.9 -3.5 putative bacteriophage tail completion protein compare
BWI76_RS00140 -0.9 -0.9 phosphate transport system regulator PhoU compare
BWI76_RS19035 -0.9 -3.9 dTDP-rhamnosyl transferase compare
BWI76_RS26150 -0.9 -1.8 molecular chaperone Hsp33 compare
BWI76_RS01110 -0.9 -1.7 TDP-fucosamine acetyltransferase compare
BWI76_RS15635 -0.9 -3.3 hypothetical protein compare
BWI76_RS20130 -0.9 -4.5 NADH-quinone oxidoreductase subunit N compare
BWI76_RS20995 -0.8 -3.6 RNA degradosome polyphosphate kinase compare
BWI76_RS15640 -0.8 -6.0 hypothetical protein compare
BWI76_RS23920 -0.8 -2.4 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS01650 -0.8 -2.4 acetyltransferase compare
BWI76_RS11015 -0.8 -2.3 hypothetical protein compare
BWI76_RS21685 -0.8 -1.3 hypothetical protein compare
BWI76_RS17980 -0.8 -3.5 RNA chaperone ProQ compare
BWI76_RS26580 -0.8 -4.1 universal stress protein A compare
BWI76_RS06830 -0.8 -2.6 recombination protein RecR compare
BWI76_RS22755 -0.8 -3.8 phosphoadenosine phosphosulfate reductase compare
BWI76_RS15235 -0.8 -1.4 hypothetical protein compare
BWI76_RS15705 -0.8 -3.0 putative holin protein compare
BWI76_RS15685 -0.8 -2.0 hypothetical protein compare
BWI76_RS07070 -0.8 -2.6 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS25905 -0.8 -2.2 hypothetical protein compare
BWI76_RS19615 -0.8 -2.0 vancomycin high temperature exclusion protein compare
BWI76_RS12170 -0.8 -2.9 hypothetical protein compare
BWI76_RS24400 -0.8 -3.6 outer membrane channel protein TolC compare
BWI76_RS08720 -0.8 -1.1 imidazolonepropionase compare
BWI76_RS15645 -0.8 -4.7 gp6 compare
BWI76_RS13560 -0.8 -1.0 amino acid ABC transporter substrate-binding subunit compare
BWI76_RS04270 -0.8 -2.6 transaldolase compare
BWI76_RS05015 -0.8 -2.0 transcriptional regulator compare
BWI76_RS12125 -0.8 -1.7 hypothetical protein compare
BWI76_RS10930 -0.8 -3.4 glucan biosynthesis protein G compare
BWI76_RS10910 -0.8 -2.8 hypothetical protein compare
BWI76_RS16500 -0.8 -2.4 superoxide dismutase [Fe] compare
BWI76_RS09760 -0.8 -3.2 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS17780 -0.8 -1.8 septum formation inhibitor compare
BWI76_RS19900 -0.8 -1.7 FAD:protein FMN transferase compare
BWI76_RS12280 -0.8 -2.6 hypothetical protein compare
BWI76_RS04100 -0.8 -1.8 peptide chain release factor 3 compare
BWI76_RS07970 -0.8 -2.4 hypothetical protein compare
BWI76_RS18140 -0.7 -1.5 zinc ABC transporter permease compare
BWI76_RS25655 -0.7 -2.6 DNA topoisomerase type IA zn finger domain-containing protein compare
BWI76_RS26260 -0.7 -1.5 hypothetical protein compare
BWI76_RS14615 -0.7 -1.1 hypothetical protein compare
BWI76_RS14305 -0.7 -2.7 metallophosphoesterase compare
BWI76_RS01090 -0.7 -2.2 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
BWI76_RS07465 -0.7 -2.2 TetR family transcriptional regulator compare
BWI76_RS14225 -0.7 -1.2 anti-ECF sigma factor ChrR compare
BWI76_RS12185 -0.7 -1.6 hypothetical protein compare
BWI76_RS00330 -0.7 -2.0 molybdenum cofactor guanylyltransferase compare
BWI76_RS02225 -0.7 -2.2 phosphonate C-P lyase system protein PhnG compare
BWI76_RS20140 -0.7 -3.5 NADH-quinone oxidoreductase subunit L compare
BWI76_RS24825 -0.7 -1.9 2-hydroxy-3-oxopropionate reductase compare
BWI76_RS01080 -0.7 -4.2 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
BWI76_RS26200 -0.7 -4.1 starch synthase compare
BWI76_RS11125 -0.7 -1.2 metal-dependent hydrolase compare
BWI76_RS21810 -0.7 -1.2 universal stress protein compare
BWI76_RS15630 -0.7 -3.7 hypothetical protein compare
BWI76_RS15700 -0.7 -2.6 hypothetical protein compare
BWI76_RS19040 -0.7 -2.9 hypothetical protein compare
BWI76_RS17720 -0.7 -0.9 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS20000 -0.7 -1.7 competence/damage-inducible protein A compare
BWI76_RS19050 -0.7 -4.9 NAD(P)-dependent oxidoreductase compare
BWI76_RS15770 -0.7 -2.6 hypothetical protein compare
BWI76_RS15650 -0.7 -2.1 gp5 compare
BWI76_RS17985 -0.7 -2.6 hypothetical protein compare
BWI76_RS26635 -0.7 -2.5 hypothetical protein compare
BWI76_RS01125 -0.7 -2.4 4-alpha-L-fucosyltransferase compare
BWI76_RS12790 -0.7 -1.2 lactate dehydrogenase compare
BWI76_RS01205 -0.7 -1.6 DUF484 family protein compare
BWI76_RS02445 -0.7 -2.1 fumarate reductase subunit C compare
BWI76_RS00795 -0.7 -1.3 carboxymuconolactone decarboxylase compare
BWI76_RS20795 -0.7 -1.0 ethanolamine catabolic microcompartment shell protein EutN compare
BWI76_RS15605 -0.7 -2.0 hypothetical protein compare
BWI76_RS10935 -0.7 -3.0 glucan biosynthesis glucosyltransferase H compare
BWI76_RS11520 -0.7 -1.0 hypothetical protein compare
BWI76_RS22095 -0.7 -1.4 multidrug export protein EmrA compare
BWI76_RS15745 -0.7 -2.6 hypothetical protein compare
BWI76_RS11810 -0.7 -1.5 outer membrane protein OmpW compare
BWI76_RS12305 -0.7 -2.7 hypothetical protein compare
BWI76_RS19700 -0.7 -1.7 deoxyribonuclease IV compare
BWI76_RS27440 -0.7 -2.1 DNA helicase RecG compare
BWI76_RS10365 -0.7 -1.9 class IV aminotransferase compare
BWI76_RS00400 -0.7 -0.7 glutamine synthetase compare
BWI76_RS17860 -0.6 -1.5 YoaH family protein compare
BWI76_RS12335 -0.6 -3.4 hypothetical protein compare
BWI76_RS02815 -0.6 -1.2 fructose-bisphosphatase class I compare
BWI76_RS21395 -0.6 -1.8 DTW domain-containing protein compare
BWI76_RS21690 -0.6 -1.5 hypothetical protein compare
BWI76_RS25160 -0.6 -1.2 transcription elongation factor GreA compare
BWI76_RS19025 -0.6 -4.5 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) compare
BWI76_RS04645 -0.6 -3.1 3-dehydroquinase compare
BWI76_RS19685 -0.6 -1.9 lysine transporter compare
BWI76_RS03040 -0.6 -1.6 leucyl aminopeptidase compare
BWI76_RS19375 -0.6 -1.0 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
BWI76_RS05005 -0.6 -1.5 polynucleotide adenylyltransferase compare
BWI76_RS20150 -0.6 -0.9 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS24955 -0.6 -1.1 hypothetical protein compare
BWI76_RS23360 -0.6 -1.8 diaminopimelate decarboxylase compare
BWI76_RS26455 -0.6 -1.8 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS01135 -0.6 -2.0 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in supernatant experiments

For supernatant Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted across organisms