Experiment set10IT086 for Klebsiella michiganensis M5al

Compare to:

LB 0.5x with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x

200 most important genes:

  gene name fitness t score description  
BWI76_RS09660 -5.0 -3.5 DNA translocase FtsK compare
BWI76_RS23240 -5.0 -3.5 exonuclease V subunit gamma compare
BWI76_RS01210 -4.9 -6.7 tyrosine recombinase XerC compare
BWI76_RS23230 -4.4 -3.0 exodeoxyribonuclease V subunit beta compare
BWI76_RS09970 -3.8 -8.6 porin OmpA compare
BWI76_RS02530 -3.6 -3.4 tRNA dimethylallyltransferase compare
BWI76_RS15115 -3.3 -10.0 MFS transporter compare
BWI76_RS00400 -3.2 -2.1 glutamine synthetase compare
BWI76_RS15825 -3.1 -4.5 hypothetical protein compare
BWI76_RS16965 -2.7 -5.7 murein lipoprotein compare
BWI76_RS09645 -2.7 -3.0 thioredoxin-disulfide reductase compare
BWI76_RS19585 -2.5 -3.4 gentisate 1,2-dioxygenase compare
BWI76_RS09190 -2.3 -5.0 hypothetical protein compare
BWI76_RS20650 -2.2 -1.5 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS04715 -2.1 -4.0 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS08525 -2.1 -5.2 colicin transporter compare
BWI76_RS04510 -2.0 -2.9 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS15660 -2.0 -2.3 hypothetical protein compare
BWI76_RS02410 -2.0 -2.4 EF-P beta-lysylation protein EpmB compare
BWI76_RS08535 -2.0 -2.5 translocation protein TolB compare
BWI76_RS10990 -1.9 -2.1 dihydroorotase compare
BWI76_RS00355 -1.9 -4.8 DNA polymerase I compare
BWI76_RS21370 -1.8 -2.9 ATP-dependent RNA helicase SrmB compare
BWI76_RS04530 -1.8 -2.6 peptidylprolyl isomerase SurA compare
BWI76_RS15835 -1.8 -1.5 hypothetical protein compare
BWI76_RS17720 -1.8 -1.9 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS23265 -1.8 -4.6 hypothetical protein compare
BWI76_RS15110 -1.8 -12.4 putative excinuclease ABC subunit A compare
BWI76_RS26075 -1.7 -4.1 DNA adenine methylase compare
BWI76_RS13250 -1.7 -1.9 cytochrome b561 compare
BWI76_RS26620 -1.7 -1.6 Fe-S biogenesis protein NfuA compare
BWI76_RS25335 -1.7 -3.7 stringent starvation protein A compare
BWI76_RS17980 -1.6 -5.6 RNA chaperone ProQ compare
BWI76_RS21070 -1.6 -2.9 outer membrane protein assembly factor BamB compare
BWI76_RS26775 -1.6 -4.0 endo-1,4-D-glucanase compare
BWI76_RS04470 -1.6 -8.6 carbamoyl phosphate synthase large subunit compare
BWI76_RS19010 -1.6 -3.3 polysaccharide pyruvyl transferase yvff compare
BWI76_RS01220 -1.6 -6.7 DNA-dependent helicase II compare
BWI76_RS20090 -1.6 -4.6 ribonuclease Z compare
BWI76_RS08530 -1.6 -3.8 protein TolA compare
BWI76_RS02995 -1.5 -7.5 aspartate carbamoyltransferase compare
BWI76_RS04465 -1.5 -4.7 carbamoyl-phosphate synthase small subunit compare
BWI76_RS00140 -1.5 -1.4 phosphate transport system regulator PhoU compare
BWI76_RS15830 -1.5 -2.8 hypothetical protein compare
BWI76_RS01115 -1.4 -3.7 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS27430 -1.4 -1.8 (p)ppGpp synthetase compare
BWI76_RS03160 -1.4 -9.3 hypothetical protein compare
BWI76_RS01110 -1.4 -3.0 TDP-fucosamine acetyltransferase compare
BWI76_RS02725 -1.4 -1.6 HxlR family transcriptional regulator compare
BWI76_RS17190 -1.4 -3.1 TonB system transport protein TonB compare
BWI76_RS16485 -1.4 -1.9 ribonuclease T compare
BWI76_RS10930 -1.3 -6.5 glucan biosynthesis protein G compare
BWI76_RS01200 -1.3 -2.3 diaminopimelate epimerase compare
BWI76_RS05120 -1.3 -7.5 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS24400 -1.3 -5.4 outer membrane channel protein TolC compare
BWI76_RS15850 -1.3 -1.8 DUF1317 domain-containing protein compare
BWI76_RS22805 -1.3 -6.9 GTP diphosphokinase compare
BWI76_RS05260 -1.3 -1.8 chaperone compare
BWI76_RS03155 -1.3 -9.6 hypothetical protein compare
BWI76_RS27875 -1.3 -1.9 membrane protein compare
BWI76_RS01185 -1.2 -1.7 adenylate cyclase compare
BWI76_RS15840 -1.2 -2.6 prophage protein compare
BWI76_RS04100 -1.2 -3.5 peptide chain release factor 3 compare
BWI76_RS21450 -1.2 -2.5 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS19035 -1.2 -4.4 dTDP-rhamnosyl transferase compare
BWI76_RS17975 -1.1 -4.1 tail-specific protease compare
BWI76_RS25920 -1.1 -1.8 peptidylprolyl isomerase compare
BWI76_RS21580 -1.1 -2.0 SsrA-binding protein compare
BWI76_RS27425 -1.1 -1.7 DNA-directed RNA polymerase subunit omega compare
BWI76_RS11965 -1.1 -3.0 orotidine-5'-phosphate decarboxylase compare
BWI76_RS13400 -1.1 -3.5 GntR family transcriptional regulator compare
BWI76_RS20435 -1.1 -1.6 chorismate synthase compare
BWI76_RS09635 -1.1 -1.9 amino acid ABC transporter ATP-binding protein compare
BWI76_RS20355 -1.1 -2.5 colicin V production protein compare
BWI76_RS20895 -1.0 -3.8 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS08520 -1.0 -2.1 colicin transporter TolQ compare
BWI76_RS27390 -1.0 -4.6 ribonuclease PH compare
BWI76_RS09640 -1.0 -2.3 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS26085 -1.0 -1.3 3-dehydroquinate synthase compare
BWI76_RS26460 -1.0 -4.4 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS16355 -1.0 -2.5 electron transport complex subunit A compare
BWI76_RS13820 -1.0 -1.7 hypothetical protein compare
BWI76_RS12465 -1.0 -1.3 phage shock protein D compare
BWI76_RS25425 -1.0 -1.5 arginine repressor compare
BWI76_RS27015 -1.0 -4.6 hypothetical protein compare
BWI76_RS24100 -1.0 -2.8 YggS family pyridoxal phosphate enzyme compare
BWI76_RS19310 -1.0 -1.9 ABC transporter permease compare
BWI76_RS11990 -1.0 -2.7 exoribonuclease II compare
BWI76_RS15640 -1.0 -4.0 hypothetical protein compare
BWI76_RS01125 -1.0 -3.9 4-alpha-L-fucosyltransferase compare
BWI76_RS01585 -1.0 -3.0 transcriptional regulator compare
BWI76_RS20180 -1.0 -4.4 NADH-quinone oxidoreductase subunit C/D compare
BWI76_RS26080 -1.0 -3.5 cell division protein DamX compare
BWI76_RS09910 -1.0 -7.4 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS23915 -1.0 -2.4 5-formyltetrahydrofolate cyclo-ligase compare
BWI76_RS08495 -1.0 -4.7 cytochrome bd-I ubiquinol oxidase subunit I compare
BWI76_RS25060 -1.0 -2.4 lipoprotein NlpI compare
BWI76_RS23360 -1.0 -2.0 diaminopimelate decarboxylase compare
BWI76_RS01870 -1.0 -3.0 diacylglycerol kinase compare
BWI76_RS07465 -1.0 -2.6 TetR family transcriptional regulator compare
BWI76_RS01935 -0.9 -1.8 thiamin phosphate synthase compare
BWI76_RS05075 -0.9 -1.1 type II secretion system protein GspG compare
BWI76_RS12285 -0.9 -2.8 hypothetical protein compare
BWI76_RS19615 -0.9 -3.2 vancomycin high temperature exclusion protein compare
BWI76_RS08040 -0.9 -2.4 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
BWI76_RS25905 -0.9 -2.6 hypothetical protein compare
BWI76_RS19840 -0.9 -1.1 hypothetical protein compare
BWI76_RS01095 -0.9 -2.0 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS14075 -0.9 -1.6 TetR family transcriptional regulator compare
BWI76_RS15530 -0.9 -2.3 hypothetical protein compare
BWI76_RS27820 -0.9 -1.9 ilvB operon leader peptide IvbL compare
BWI76_RS12170 -0.9 -3.3 hypothetical protein compare
BWI76_RS03105 -0.9 -1.2 myo-inosose-2 dehydratase compare
BWI76_RS00010 -0.9 -5.0 DNA replication and repair protein RecF compare
BWI76_RS00240 -0.9 -1.6 FMN-binding protein MioC compare
BWI76_RS06830 -0.9 -3.1 recombination protein RecR compare
BWI76_RS10935 -0.9 -4.0 glucan biosynthesis glucosyltransferase H compare
BWI76_RS09030 -0.9 -4.2 transpeptidase compare
BWI76_RS21265 -0.9 -6.6 phosphoribosylformylglycinamidine synthase compare
BWI76_RS11675 -0.9 -2.2 arginine N-succinyltransferase compare
BWI76_RS24885 -0.9 -1.3 PTS galactitol transporter subunit IIB compare
BWI76_RS05335 -0.9 -2.9 copper homeostasis/adhesion lipoprotein NlpE compare
BWI76_RS27440 -0.9 -2.7 DNA helicase RecG compare
BWI76_RS19050 -0.9 -5.8 NAD(P)-dependent oxidoreductase compare
BWI76_RS13955 -0.9 -1.9 hypothetical protein compare
BWI76_RS01205 -0.9 -2.0 DUF484 family protein compare
BWI76_RS15690 -0.8 -2.9 hypothetical protein compare
BWI76_RS24945 -0.8 -1.1 glutamine amidotransferase compare
BWI76_RS12235 -0.8 -1.9 hypothetical protein compare
BWI76_RS08020 -0.8 -4.0 serine-type D-Ala-D-Ala carboxypeptidase compare
BWI76_RS12305 -0.8 -2.9 hypothetical protein compare
BWI76_RS09760 -0.8 -3.4 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS09960 -0.8 -2.3 Lon protease compare
BWI76_RS27385 -0.8 -4.0 orotate phosphoribosyltransferase compare
BWI76_RS19935 -0.8 -1.7 hypothetical protein compare
BWI76_RS06680 -0.8 -1.0 hypothetical protein compare
BWI76_RS25960 -0.8 -2.9 NUDIX hydrolase compare
BWI76_RS00180 -0.8 -1.1 F0F1 ATP synthase subunit epsilon compare
BWI76_RS17110 -0.8 -1.6 vitamin B12 ABC transporter permease BtuC compare
BWI76_RS06530 -0.8 -3.7 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS15810 -0.8 -4.2 hypothetical protein compare
BWI76_RS07165 -0.8 -2.6 hypothetical protein compare
BWI76_RS15620 -0.8 -1.8 hypothetical protein compare
BWI76_RS01800 -0.8 -1.6 glucose-6-phosphate isomerase compare
BWI76_RS12335 -0.8 -4.7 hypothetical protein compare
BWI76_RS21460 -0.8 -1.3 translation inhibitor protein RaiA compare
BWI76_RS20350 -0.8 -3.6 amidophosphoribosyltransferase compare
BWI76_RS25870 -0.8 -1.3 elongation factor Tu compare
BWI76_RS01090 -0.8 -3.7 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
BWI76_RS27505 -0.8 -3.5 septal ring assembly protein ZapB compare
BWI76_RS26200 -0.8 -4.0 starch synthase compare
BWI76_RS20160 -0.8 -1.8 NADH-quinone oxidoreductase subunit H compare
BWI76_RS16000 -0.8 -1.4 multidrug transporter subunit MdtI compare
BWI76_RS15195 -0.8 -1.4 DUF4186 domain-containing protein compare
BWI76_RS06540 -0.8 -2.1 DNA-binding protein HU-beta compare
BWI76_RS18335 -0.8 -4.2 DNA-binding response regulator compare
BWI76_RS26570 -0.8 -1.8 anion permease compare
BWI76_RS19055 -0.8 -5.6 dTDP-4-dehydrorhamnose 3,5-epimerase compare
BWI76_RS12215 -0.8 -3.3 HNH endonuclease compare
BWI76_RS04160 -0.8 -3.0 phosphoserine phosphatase compare
BWI76_RS15655 -0.8 -3.9 hypothetical protein compare
BWI76_RS13445 -0.8 -2.1 alpha/beta hydrolase compare
BWI76_RS09860 -0.8 -2.1 hypothetical protein compare
BWI76_RS02855 -0.8 -1.5 cytochrome B562 compare
BWI76_RS08500 -0.8 -1.7 cytochrome d ubiquinol oxidase subunit 2 compare
BWI76_RS20715 -0.8 -1.9 RpoE-regulated lipoprotein compare
BWI76_RS22755 -0.8 -4.2 phosphoadenosine phosphosulfate reductase compare
BWI76_RS15705 -0.8 -3.7 putative holin protein compare
BWI76_RS00380 -0.8 -4.7 oxygen-independent coproporphyrinogen III oxidase compare
BWI76_RS18390 -0.8 -2.4 hypothetical protein compare
BWI76_RS01775 -0.8 -1.0 hypothetical protein compare
BWI76_RS20135 -0.8 -3.4 NADH-quinone oxidoreductase subunit M compare
BWI76_RS12330 -0.8 -3.0 hypothetical protein compare
BWI76_RS12295 -0.7 -4.1 hypothetical protein compare
BWI76_RS15800 -0.7 -2.5 transcriptional regulator compare
BWI76_RS04645 -0.7 -3.6 3-dehydroquinase compare
BWI76_RS09755 -0.7 -4.3 phosphoserine transaminase compare
BWI76_RS27435 -0.7 -3.9 tRNA (guanosine(18)-2'-O)-methyltransferase TrmH compare
BWI76_RS24825 -0.7 -2.0 2-hydroxy-3-oxopropionate reductase compare
BWI76_RS02255 -0.7 -2.8 chaperone-modulator protein CbpM compare
BWI76_RS01615 -0.7 -4.3 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS19000 -0.7 -3.5 acyltransferase compare
BWI76_RS12300 -0.7 -4.8 hypothetical protein compare
BWI76_RS04060 -0.7 -1.6 hypothetical protein compare
BWI76_RS07070 -0.7 -2.9 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS04270 -0.7 -2.4 transaldolase compare
BWI76_RS07065 -0.7 -3.4 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS10035 -0.7 -0.9 hypothetical protein compare
BWI76_RS22205 -0.7 -2.1 cation ABC transporter ATP-binding protein compare
BWI76_RS23320 -0.7 -1.3 hypothetical protein compare
BWI76_RS06520 -0.7 -1.9 trigger factor compare
BWI76_RS01580 -0.7 -3.3 hypothetical protein compare
BWI76_RS05200 -0.7 -1.6 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS10950 -0.7 -2.1 MFS transporter compare
BWI76_RS16635 -0.7 -1.7 carbonate dehydratase compare
BWI76_RS12230 -0.7 -3.2 hypothetical protein compare
BWI76_RS13755 -0.7 -1.0 hypothetical protein compare
BWI76_RS19845 -0.7 -2.3 phosphatase compare
BWI76_RS12405 -0.7 -3.4 diguanylate phosphodiesterase compare
BWI76_RS15635 -0.7 -3.1 hypothetical protein compare


Specific Phenotypes

For 2 genes in this experiment

For supernatant Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted in Klebsiella michiganensis M5al

For supernatant Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted across organisms