Experiment set10IT085 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Anisodamine Hydrobromide () 10 mM

200 most important genes:

  gene name fitness t score description  
Psyr_4740 -4.8 -7.2 thiazole-phosphate synthase compare
Psyr_1544 -4.3 -6.5 SirA-like protein compare
Psyr_0951 -4.1 -4.2 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_4340 -4.1 -10.2 phosphomethylpyrimidine kinase, putative compare
Psyr_4683 -3.8 -2.6 dethiobiotin synthase compare
Psyr_2823 -3.5 -1.3 hypothetical protein compare
Psyr_4341 -3.3 -7.6 thiamine-phosphate diphosphorylase compare
Psyr_4684 -3.1 -3.6 biotin synthesis protein BioC compare
Psyr_0917 -2.9 -10.9 ABC-2 compare
Psyr_0575 -2.9 -2.8 protease FtsH subunit HflC compare
Psyr_0044 -2.8 -2.9 transferase hexapeptide repeat protein compare
Psyr_3008 -2.8 -5.9 Undecaprenyl-diphosphatase compare
Psyr_4686 -2.8 -7.1 8-amino-7-oxononanoate synthase compare
Psyr_0918 -2.7 -13.3 ABC transporter compare
Psyr_4627 -2.7 -1.8 dimethyladenosine transferase compare
Psyr_5135 -2.7 -1.4 Protein of unknown function DUF37 compare
Psyr_0259 -2.7 -3.1 Osmolarity sensor protein envZ compare
Psyr_4884 -2.7 -5.0 Rhodanese-like protein compare
Psyr_0454 -2.7 -6.3 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_1613 -2.6 -3.1 septum site-determining protein MinC compare
Psyr_2143 -2.5 -1.3 delta1-piperideine 2-carboxylate reductase compare
Psyr_5132 -2.5 -3.8 Glucose-inhibited division protein A subfamily compare
Psyr_4136 -2.5 -3.3 BolA-like protein compare
Psyr_4203 -2.5 -1.7 SsrA-binding protein compare
Psyr_4687 -2.5 -7.0 biotin synthase compare
Psyr_0849 -2.5 -6.9 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_1373 -2.4 -2.3 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_4089 -2.3 -6.7 PAS compare
Psyr_0464 -2.3 -2.3 hypothetical protein compare
Psyr_0255 -2.3 -2.2 glutamate-cysteine ligase compare
Psyr_3805 -2.3 -2.9 hypothetical protein compare
Psyr_4194 -2.2 -5.3 DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal compare
Psyr_0487 -2.2 -3.4 glutathione synthase compare
Psyr_4091 -2.2 -4.2 8-oxo-dGTPase compare
Psyr_0571 -2.2 -5.3 tRNA isopentenyltransferase compare
Psyr_1751 -2.2 -4.5 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_0574 -2.1 -3.5 protease FtsH subunit HflK compare
Psyr_2642 -2.0 -4.1 hypothetical protein compare
Psyr_RNA61 -2.0 -3.0 tRNA-Gly compare
Psyr_2639 -1.9 -5.9 hypothetical protein compare
Psyr_3287 -1.9 -1.3 DNA topoisomerase I compare
Psyr_0383 -1.9 -2.4 Twin-arginine translocation protein TatB compare
Psyr_2980 -1.9 -4.0 UDP-glucose pyrophosphorylase compare
Psyr_1460 -1.9 -4.2 hypothetical protein compare
Psyr_3436 -1.9 -5.1 Response regulator receiver compare
Psyr_2347 -1.9 -3.0 hypothetical protein compare
Psyr_2594 -1.8 -1.5 unknown conserved protein in bacilli compare
Psyr_3640 -1.8 -1.9 conserved hypothetical protein compare
Psyr_2855 -1.8 -4.2 methionine synthase (B12-independent) compare
Psyr_2184 -1.8 -2.1 Short-chain dehydrogenase/reductase SDR compare
Psyr_3620 -1.7 -1.5 hypothetical protein compare
Psyr_1859 -1.7 -2.7 conserved hypothetical protein compare
Psyr_1935 -1.7 -3.3 Protein of unknown function DUF796 compare
Psyr_1378 -1.7 -2.9 RecA protein compare
Psyr_3808 -1.7 -0.9 hypothetical protein compare
Psyr_2982 -1.7 -2.4 conserved hypothetical protein compare
Psyr_2897 -1.7 -4.0 regulatory protein, LuxR:Response regulator receiver compare
Psyr_1931 -1.6 -4.0 hypothetical protein compare
Psyr_2747 -1.6 -2.1 amino acid/amide ABC transporter substrate-binding protein, HAAT family compare
Psyr_0920 -1.6 -11.2 Glycosyl transferase, group 1 compare
Psyr_1953 -1.6 -1.9 conserved hypothetical protein compare
Psyr_3450 -1.6 -3.2 Hpt compare
Psyr_2346 -1.6 -3.8 conserved hypothetical protein compare
Psyr_0215 -1.6 -7.3 Exodeoxyribonuclease III xth compare
Psyr_3419 -1.6 -5.0 4Fe-4S ferredoxin, iron-sulfur binding protein compare
Psyr_1410 -1.5 -3.7 Holliday junction DNA helicase RuvB compare
Psyr_2141 -1.5 -2.2 hypothetical protein compare
Psyr_3040 -1.5 -1.9 conserved hypothetical protein compare
Psyr_3489 -1.5 -2.7 FlgN compare
Psyr_4566 -1.5 -6.0 Peptidase M23B compare
Psyr_0826 -1.4 -6.8 glucose-6-phosphate isomerase compare
Psyr_1929 -1.4 -3.5 hypothetical protein compare
Psyr_0565 -1.4 -4.4 Protein of unknown function UPF0126 compare
Psyr_3090 -1.4 -2.0 hypothetical protein compare
Psyr_2360 -1.4 -2.2 CBS compare
Psyr_3581 -1.4 -4.8 ribosomal large subunit pseudouridine synthase B compare
Psyr_RNA28 -1.4 -1.7 tRNA-Val compare
Psyr_0919 -1.4 -7.4 Chromosome segregation ATPase-like protein compare
Psyr_2345 -1.4 -3.5 ea59 protein compare
Psyr_1930 -1.4 -2.7 hypothetical protein compare
Psyr_4057 -1.4 -3.5 regulatory protein, LysR:LysR, substrate-binding protein compare
Psyr_4093 -1.4 -3.9 glutamate N-acetyltransferase compare
Psyr_2872 -1.4 -1.8 hypothetical protein compare
Psyr_1616 -1.3 -1.6 Rieske [2Fe-2S] region compare
Psyr_2140 -1.3 -2.4 conserved hypothetical protein compare
Psyr_4953 -1.3 -2.5 Uncharacterized conserved protein UCP028301 compare
Psyr_2183 -1.3 -2.6 transcriptional regulator, GntR family compare
Psyr_2348 -1.3 -1.7 hypothetical protein compare
Psyr_0475 -1.3 -0.8 Protein of unknown function YGGT compare
Psyr_3791 -1.2 -2.6 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal compare
Psyr_1227 -1.2 -2.5 Queuosine biosynthesis protein compare
Psyr_4996 -1.2 -4.0 hypothetical protein compare
Psyr_2854 -1.2 -3.4 conserved hypothetical protein compare
Psyr_4309 -1.2 -3.2 hypothetical protein compare
Psyr_4316 -1.2 -2.4 conserved hypothetical protein compare
Psyr_3465 -1.2 -3.0 Flagellar protein FlaG protein compare
Psyr_4380 -1.2 -2.5 translation initiation factor 1 (eIF-1/SUI1) compare
Psyr_3084 -1.1 -2.1 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_3889 -1.1 -2.2 conserved hypothetical protein compare
Psyr_2356 -1.1 -2.6 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer compare
Psyr_0835 -1.1 -3.8 transcriptional regulator, TraR/DksA family compare
Psyr_2540 -1.1 -1.2 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal compare
Psyr_1748 -1.1 -3.9 ATP-dependent Clp protease ATP-binding subunit ClpX compare
Psyr_2820 -1.1 -1.5 RecT protein compare
Psyr_4512 -1.1 -3.7 putative phage-related protein compare
Psyr_1947 -1.1 -2.0 MbtH-like protein compare
Psyr_2837 -1.1 -5.4 hypothetical protein compare
Psyr_1667 -1.1 -2.8 Colicin V production protein compare
Psyr_2362 -1.1 -2.8 Silent information regulator protein Sir2 compare
Psyr_0081 -1.1 -1.9 ABC transporter compare
Psyr_2601 -1.1 -4.2 regulatory protein, LuxR compare
Psyr_3806 -1.1 -2.0 hypothetical protein compare
Psyr_0179 -1.1 -2.4 Protein of unknown function DUF1289 compare
Psyr_1736 -1.1 -2.6 Helix-turn-helix, Fis-type compare
Psyr_3637 -1.1 -5.9 Glycosyl transferase, family 4 compare
Psyr_4786 -1.0 -1.8 hypothetical protein compare
Psyr_1780 -1.0 -1.2 transcriptional regulator, TetR family compare
Psyr_1556 -1.0 -0.7 hypothetical protein compare
Psyr_2462 -1.0 -2.8 Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region compare
Psyr_3164 -1.0 -4.4 Protein of unknown function UPF0005 compare
Psyr_0928 -1.0 -5.0 hypothetical protein compare
Psyr_2137 -1.0 -1.5 molybdopterin molybdochelatase compare
Psyr_0033 -1.0 -1.8 tryptophan synthase, alpha chain compare
Psyr_3149 -1.0 -2.6 General secretion pathway protein G compare
Psyr_2065 -1.0 -2.2 transcription elongation factor GreB compare
Psyr_2826 -1.0 -3.1 hypothetical protein compare
Psyr_2769 -1.0 -2.9 conserved hypothetical protein compare
Psyr_1022 -1.0 -1.7 conserved hypothetical protein compare
Psyr_2770 -1.0 -3.3 tail fiber domain protein compare
Psyr_2114 -1.0 -2.2 two component transcriptional regulator, LuxR family compare
Psyr_0303 -1.0 -2.3 Ferredoxin:Oxidoreductase FAD/NAD(P)-binding protein compare
Psyr_1277 -1.0 -1.6 formate-dependent phosphoribosylglycinamide formyltransferase compare
Psyr_2202 -1.0 -1.3 ABC transporter compare
Psyr_5133 -1.0 -3.1 tRNA modification GTPase trmE compare
Psyr_4100 -1.0 -3.6 D-alanine--D-alanine ligase compare
Psyr_1121 -1.0 -1.8 6-phosphogluconolactonase compare
Psyr_2209 -1.0 -2.7 ABC transporter, substrate-binding protein, aliphatic sulfonate compare
Psyr_2375 -1.0 -2.5 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_3854 -1.0 -1.1 OmpA/MotB compare
Psyr_4386 -1.0 -2.3 conserved hypothetical protein compare
Psyr_2189 -1.0 -3.5 transcriptional regulator, ArsR family compare
Psyr_2629 -1.0 -4.5 von Willebrand factor, type A compare
Psyr_2899 -1.0 -2.6 conserved hypothetical protein compare
Psyr_4417 -1.0 -1.0 Ferredoxin--nitrite reductase compare
Psyr_0863 -1.0 -2.0 PhnA protein compare
Psyr_0845 -1.0 -2.7 conserved hypothetical protein compare
Psyr_2679 -1.0 -1.5 Binding-protein-dependent transport systems inner membrane component compare
Psyr_2875 -0.9 -1.5 monosaccharide ABC transporter membrane protein, CUT2 family compare
Psyr_1687 -0.9 -3.4 Rhomboid-like protein compare
Psyr_3261 -0.9 -3.4 chemotaxis sensory transducer compare
Psyr_2808 -0.9 -1.5 hypothetical protein compare
Psyr_1875 -0.9 -2.1 Enoyl-CoA hydratase/isomerase compare
Psyr_3428 -0.9 -3.4 CheW-like protein compare
Psyr_2182 -0.9 -2.8 hypothetical protein compare
Psyr_1449 -0.9 -3.0 hypothetical protein compare
Psyr_3459 -0.9 -1.6 Helix-turn-helix, Fis-type compare
Psyr_1198 -0.9 -2.2 type III secretion protein HrpF compare
Psyr_3213 -0.9 -1.5 Propeptide, PepSY amd peptidase M4 compare
Psyr_3179 -0.9 -1.8 DNA translocase FtsK compare
Psyr_4361 -0.9 -1.4 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 compare
Psyr_1474 -0.9 -4.2 hypothetical protein compare
Psyr_4978 -0.9 -2.0 hypothetical protein compare
Psyr_3324 -0.9 -3.0 transcriptional regulator, TetR family compare
Psyr_0535 -0.9 -1.9 toluene tolerance protein, putative compare
Psyr_3900 -0.9 -1.7 conserved hypothetical protein compare
Psyr_0784 -0.9 -1.2 CheW-like protein compare
Psyr_1271 -0.9 -2.8 ErfK/YbiS/YcfS/YnhG compare
Psyr_0377 -0.9 -4.0 Periplasmic glucan biosynthesis protein, MdoG compare
Psyr_1911 -0.9 -2.1 conserved hypothetical protein compare
Psyr_1889 -0.9 -3.0 type III effector HopH1 compare
Psyr_0982 -0.9 -2.7 conserved hypothetical protein compare
Psyr_3432 -0.9 -1.5 MotA/TolQ/ExbB proton channel compare
Psyr_3089 -0.9 -6.3 Hemolysin-type calcium-binding region:hemolysin-type calcium binding related protein compare
Psyr_4498 -0.9 -1.9 outer membrane transport energization protein ExbD compare
Psyr_1190 -0.9 -2.2 type III transcriptional regulator HrpR compare
Psyr_0041 -0.9 -1.2 Protein of unknown function DUF1161 compare
Psyr_4055 -0.9 -1.1 conserved domain protein compare
Psyr_3728 -0.8 -2.6 hypothetical protein compare
Psyr_3342 -0.8 -1.8 conserved hypothetical protein compare
Psyr_1564 -0.8 -2.7 Protein of unknown function DUF709 compare
Psyr_2476 -0.8 -1.5 Exodeoxyribonuclease III compare
Psyr_4584 -0.8 -5.5 Protein of unknown function DUF144 compare
Psyr_2144 -0.8 -1.4 conserved hypothetical protein compare
Psyr_4140 -0.8 -1.8 Protein of unknown function DUF140 compare
Psyr_3473 -0.8 -1.4 Flagellar P-ring protein compare
Psyr_2848 -0.8 -1.7 hypothetical protein compare
Psyr_2387 -0.8 -1.6 Malate:quinone-oxidoreductase compare
Psyr_1528 -0.8 -1.7 Arc-like DNA binding protein compare
Psyr_4143 -0.8 -2.1 HAD-superfamily hydrolase, subfamily IIIA:Phosphatase YrbI compare
Psyr_2175 -0.8 -3.5 L-carnitine dehydratase/bile acid-inducible protein F compare
Psyr_0034 -0.8 -0.8 tryptophan synthase, beta chain compare
Psyr_1226 -0.8 -1.5 hypothetical protein compare
Psyr_0202 -0.8 -3.8 transcriptional regulator, LysR family compare
Psyr_1670 -0.8 -1.3 Short-chain dehydrogenase/reductase SDR compare
Psyr_0529 -0.8 -2.2 Glycosyl transferase, group 1 compare
Psyr_2320 -0.8 -3.0 YD repeat protein compare
Psyr_2948 -0.8 -3.3 Nitroreductase compare
Psyr_2664 -0.8 -3.1 hypothetical protein compare
Psyr_1389 -0.8 -1.8 Protein of unknown function DUF1456 compare
Psyr_2659 -0.8 -5.1 Protein of unknown function DUF955 compare


Specific Phenotypes

For 3 genes in this experiment

For stress Anisodamine Hydrobromide () in Pseudomonas syringae pv. syringae B728a

For stress Anisodamine Hydrobromide () across organisms