Experiment set10IT084 for Klebsiella michiganensis M5al

Compare to:

Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x

200 most important genes:

  gene name fitness t score description  
BWI76_RS18930 -7.1 -6.9 histidinol-phosphate transaminase compare
BWI76_RS01210 -6.0 -5.1 tyrosine recombinase XerC compare
BWI76_RS26085 -5.8 -4.0 3-dehydroquinate synthase compare
BWI76_RS18940 -5.7 -7.7 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS18935 -5.7 -9.3 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS09645 -5.6 -2.6 thioredoxin-disulfide reductase compare
BWI76_RS20895 -5.6 -6.6 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS23920 -5.5 -7.5 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS18920 -5.3 -5.1 ATP phosphoribosyltransferase compare
BWI76_RS04250 -5.2 -7.9 homoserine kinase compare
BWI76_RS09660 -5.2 -3.6 DNA translocase FtsK compare
BWI76_RS00850 -5.1 -11.8 acetylglutamate kinase compare
BWI76_RS00855 -5.1 -9.7 argininosuccinate lyase compare
BWI76_RS23360 -5.1 -5.9 diaminopimelate decarboxylase compare
BWI76_RS09755 -5.0 -10.0 phosphoserine transaminase compare
BWI76_RS23220 -4.9 -9.2 amino-acid N-acetyltransferase compare
BWI76_RS23240 -4.9 -4.7 exonuclease V subunit gamma compare
BWI76_RS20350 -4.8 -10.2 amidophosphoribosyltransferase compare
BWI76_RS09760 -4.8 -7.8 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS04470 -4.7 -10.9 carbamoyl phosphate synthase large subunit compare
BWI76_RS18925 -4.7 -9.4 histidinol dehydrogenase compare
BWI76_RS01615 -4.6 -11.6 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS04160 -4.6 -5.6 phosphoserine phosphatase compare
BWI76_RS25115 -4.5 -7.8 argininosuccinate synthase compare
BWI76_RS07070 -4.4 -6.6 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS01610 -4.4 -8.6 phosphoribosylamine--glycine ligase compare
BWI76_RS04255 -4.4 -12.0 threonine synthase compare
BWI76_RS21265 -4.4 -15.7 phosphoribosylformylglycinamidine synthase compare
BWI76_RS25320 -4.2 -12.5 glutamate synthase compare
BWI76_RS11965 -4.2 -5.8 orotidine-5'-phosphate decarboxylase compare
BWI76_RS09970 -4.1 -8.1 porin OmpA compare
BWI76_RS20355 -4.1 -7.2 colicin V production protein compare
BWI76_RS00845 -4.0 -9.6 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS04465 -4.0 -6.3 carbamoyl-phosphate synthase small subunit compare
BWI76_RS25315 -3.9 -14.1 glutamate synthase large subunit compare
BWI76_RS00785 -3.8 -8.4 cystathionine gamma-synthase compare
BWI76_RS00835 -3.8 -17.3 phosphoenolpyruvate carboxylase compare
BWI76_RS00805 -3.8 -7.2 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS03010 -3.8 -9.2 ornithine carbamoyltransferase compare
BWI76_RS18950 -3.7 -5.0 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS00990 -3.7 -11.6 ketol-acid reductoisomerase compare
BWI76_RS15115 -3.7 -10.2 MFS transporter compare
BWI76_RS02995 -3.6 -6.9 aspartate carbamoyltransferase compare
BWI76_RS04245 -3.5 -14.1 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS23365 -3.5 -2.9 LysR family transcriptional regulator compare
BWI76_RS18955 -3.5 -6.2 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS11840 -3.4 -7.1 tryptophan synthase subunit alpha compare
BWI76_RS20435 -3.4 -2.0 chorismate synthase compare
BWI76_RS05835 -3.4 -3.9 gamma-glutamyl-phosphate reductase compare
BWI76_RS22755 -3.4 -9.4 phosphoadenosine phosphosulfate reductase compare
BWI76_RS00400 -3.4 -2.3 glutamine synthetase compare
BWI76_RS20965 -3.3 -5.5 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS00385 -3.3 -9.9 nitrogen assimilation regulatory protein compare
BWI76_RS23230 -3.2 -5.2 exodeoxyribonuclease V subunit beta compare
BWI76_RS01655 -3.2 -11.5 homoserine O-succinyltransferase compare
BWI76_RS04645 -3.1 -5.9 3-dehydroquinase compare
BWI76_RS09910 -3.1 -16.1 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS00975 -3.1 -9.0 dihydroxy-acid dehydratase compare
BWI76_RS21475 -3.1 -9.0 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS24285 -3.0 -10.8 cystathionine beta-lyase compare
BWI76_RS05840 -3.0 -8.1 glutamate 5-kinase compare
BWI76_RS04670 -3.0 -9.0 3-isopropylmalate dehydratase large subunit compare
BWI76_RS22805 -3.0 -8.9 GTP diphosphokinase compare
BWI76_RS08385 -2.9 -5.2 citrate (Si)-synthase compare
BWI76_RS04240 -2.9 -3.6 thr operon leader peptide compare
BWI76_RS00390 -2.9 -8.3 two-component system sensor histidine kinase NtrB compare
BWI76_RS16965 -2.8 -4.2 murein lipoprotein compare
BWI76_RS10990 -2.8 -2.8 dihydroorotase compare
BWI76_RS27385 -2.7 -8.6 orotate phosphoribosyltransferase compare
BWI76_RS04675 -2.7 -9.2 3-isopropylmalate dehydrogenase compare
BWI76_RS02735 -2.7 -5.8 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS15825 -2.7 -5.1 hypothetical protein compare
BWI76_RS07065 -2.6 -10.5 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS22765 -2.6 -9.3 sulfite reductase subunit alpha compare
BWI76_RS05200 -2.6 -3.7 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS15110 -2.6 -15.8 putative excinuclease ABC subunit A compare
BWI76_RS00980 -2.5 -11.4 PLP-dependent threonine dehydratase compare
BWI76_RS11850 -2.5 -7.3 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS04665 -2.4 -15.9 3-isopropylmalate dehydratase small subunit compare
BWI76_RS26055 -2.4 -8.1 siroheme synthase compare
BWI76_RS00345 -2.4 -4.9 protein disulfide oxidoreductase DsbA compare
BWI76_RS11860 -2.3 -7.2 anthranilate synthase component I compare
BWI76_RS26460 -2.3 -6.8 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS26000 -2.3 -6.3 aspartate aminotransferase family protein compare
BWI76_RS22760 -2.2 -6.0 sulfite reductase subunit beta compare
BWI76_RS08525 -2.2 -5.5 colicin transporter compare
BWI76_RS04715 -2.2 -3.9 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS04680 -2.1 -9.2 2-isopropylmalate synthase compare
BWI76_RS22690 -2.1 -4.2 adenylyl-sulfate kinase compare
BWI76_RS11845 -2.1 -4.6 tryptophan synthase subunit beta compare
BWI76_RS20650 -2.0 -1.9 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS11855 -2.0 -7.4 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS25645 -2.0 -7.5 shikimate dehydrogenase compare
BWI76_RS01200 -2.0 -3.0 diaminopimelate epimerase compare
BWI76_RS15835 -1.9 -1.2 hypothetical protein compare
BWI76_RS17375 -1.9 -2.9 nitrate ABC transporter, permease protein compare
BWI76_RS02530 -1.8 -3.1 tRNA dimethylallyltransferase compare
BWI76_RS00965 -1.8 -1.6 acetolactate synthase 2 small subunit compare
BWI76_RS00960 -1.8 -5.5 acetolactate synthase 2 catalytic subunit compare
BWI76_RS01220 -1.8 -6.2 DNA-dependent helicase II compare
BWI76_RS23480 -1.8 -10.9 EAL domain-containing protein compare
BWI76_RS04510 -1.8 -2.3 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS08530 -1.8 -3.9 protein TolA compare
BWI76_RS23265 -1.8 -3.6 hypothetical protein compare
BWI76_RS24885 -1.7 -2.0 PTS galactitol transporter subunit IIB compare
BWI76_RS17720 -1.7 -1.8 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS06535 -1.7 -5.0 endopeptidase La compare
BWI76_RS17385 -1.7 -7.6 nitrate regulatory protein compare
BWI76_RS26455 -1.7 -2.1 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS26570 -1.7 -3.3 anion permease compare
BWI76_RS08535 -1.7 -2.3 translocation protein TolB compare
BWI76_RS04685 -1.6 -5.2 putative leucine operon leader peptide compare
BWI76_RS05015 -1.6 -2.6 transcriptional regulator compare
BWI76_RS21140 -1.6 -2.7 molecular chaperone HscA compare
BWI76_RS27390 -1.6 -4.4 ribonuclease PH compare
BWI76_RS19700 -1.6 -2.9 deoxyribonuclease IV compare
BWI76_RS17365 -1.6 -11.5 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) compare
BWI76_RS26775 -1.6 -6.4 endo-1,4-D-glucanase compare
BWI76_RS26405 -1.6 -1.7 16S rRNA (guanine(966)-N(2))-methyltransferase compare
BWI76_RS27165 -1.6 -5.5 mannitol-1-phosphate 5-dehydrogenase compare
BWI76_RS26075 -1.5 -4.6 DNA adenine methylase compare
BWI76_RS21465 -1.5 -3.6 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS26395 -1.5 -4.3 cell division protein FtsE compare
BWI76_RS17370 -1.5 -2.2 nitrate transporter NasD compare
BWI76_RS02050 -1.5 -2.3 CidA/LrgA family protein compare
BWI76_RS09640 -1.5 -3.7 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS26200 -1.4 -6.2 starch synthase compare
BWI76_RS25335 -1.4 -4.6 stringent starvation protein A compare
BWI76_RS06525 -1.4 -6.1 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS09030 -1.4 -4.1 transpeptidase compare
BWI76_RS19840 -1.4 -1.4 hypothetical protein compare
BWI76_RS01275 -1.4 -6.1 LysR family transcriptional regulator compare
BWI76_RS24400 -1.4 -5.4 outer membrane channel protein TolC compare
BWI76_RS01185 -1.4 -1.9 adenylate cyclase compare
BWI76_RS08180 -1.4 -7.4 asparagine synthase B compare
BWI76_RS16000 -1.4 -2.0 multidrug transporter subunit MdtI compare
BWI76_RS26620 -1.4 -1.4 Fe-S biogenesis protein NfuA compare
BWI76_RS06675 -1.3 -7.1 nickel/cobalt efflux protein RcnA compare
BWI76_RS17975 -1.3 -4.7 tail-specific protease compare
BWI76_RS21370 -1.3 -2.5 ATP-dependent RNA helicase SrmB compare
BWI76_RS15830 -1.3 -2.5 hypothetical protein compare
BWI76_RS26390 -1.3 -4.7 cell division protein FtsX compare
BWI76_RS15435 -1.3 -2.1 hypothetical protein compare
BWI76_RS09190 -1.3 -4.8 hypothetical protein compare
BWI76_RS15840 -1.3 -2.8 prophage protein compare
BWI76_RS08520 -1.3 -2.8 colicin transporter TolQ compare
BWI76_RS15845 -1.3 -1.4 hypothetical protein compare
BWI76_RS06530 -1.2 -4.0 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS12465 -1.2 -1.4 phage shock protein D compare
BWI76_RS15850 -1.2 -1.7 DUF1317 domain-containing protein compare
BWI76_RS19845 -1.2 -2.8 phosphatase compare
BWI76_RS01870 -1.2 -4.1 diacylglycerol kinase compare
BWI76_RS12375 -1.2 -4.2 DNA-invertase hin compare
BWI76_RS25480 -1.2 -3.5 ribonuclease E/G compare
BWI76_RS23070 -1.2 -4.0 cobalt-precorrin-7 (C(5))-methyltransferase compare
BWI76_RS12090 -1.2 -1.3 HNH endonuclease compare
BWI76_RS01110 -1.2 -2.2 TDP-fucosamine acetyltransferase compare
BWI76_RS01800 -1.1 -2.9 glucose-6-phosphate isomerase compare
BWI76_RS21480 -1.1 -3.6 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BWI76_RS12295 -1.1 -3.2 hypothetical protein compare
BWI76_RS16485 -1.1 -1.9 ribonuclease T compare
BWI76_RS23915 -1.1 -1.3 5-formyltetrahydrofolate cyclo-ligase compare
BWI76_RS10955 -1.1 -1.3 hypothetical protein compare
BWI76_RS21070 -1.1 -2.2 outer membrane protein assembly factor BamB compare
BWI76_RS17380 -1.1 -3.7 nitrate transporter component compare
BWI76_RS15635 -1.1 -2.7 hypothetical protein compare
BWI76_RS00720 -1.1 -2.5 DNA-binding response regulator compare
BWI76_RS12235 -1.1 -2.5 hypothetical protein compare
BWI76_RS19685 -1.1 -4.0 lysine transporter compare
BWI76_RS16535 -1.0 -4.5 MATE family efflux transporter conserved
BWI76_RS10930 -1.0 -5.0 glucan biosynthesis protein G compare
BWI76_RS10245 -1.0 -2.2 aspartate aminotransferase compare
BWI76_RS04530 -1.0 -1.2 peptidylprolyl isomerase SurA compare
BWI76_RS08655 -1.0 -3.3 molybdenum ABC transporter ATP-binding protein compare
BWI76_RS15975 -1.0 -1.1 hypothetical protein compare
BWI76_RS27875 -1.0 -1.7 membrane protein compare
BWI76_RS21675 -1.0 -1.3 hypothetical protein compare
BWI76_RS08500 -1.0 -2.5 cytochrome d ubiquinol oxidase subunit 2 compare
BWI76_RS26470 -1.0 -3.5 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase compare
BWI76_RS06770 -0.9 -6.0 Hha toxicity attenuator compare
BWI76_RS04955 -0.9 -1.8 hypoxanthine phosphoribosyltransferase compare
BWI76_RS12050 -0.9 -3.1 hypothetical protein compare
BWI76_RS26670 -0.9 -4.7 two-component sensor histidine kinase compare
BWI76_RS21310 -0.9 -1.1 DNA repair protein RecO compare
BWI76_RS15660 -0.9 -1.4 hypothetical protein compare
BWI76_RS19035 -0.9 -3.8 dTDP-rhamnosyl transferase compare
BWI76_RS19375 -0.9 -1.3 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
BWI76_RS17190 -0.9 -2.4 TonB system transport protein TonB compare
BWI76_RS08495 -0.9 -4.5 cytochrome bd-I ubiquinol oxidase subunit I compare
BWI76_RS01325 -0.9 -1.8 twin-arginine translocase subunit TatB compare
BWI76_RS12280 -0.9 -2.6 hypothetical protein compare
BWI76_RS01550 -0.9 -3.4 thiamine phosphate synthase compare
BWI76_RS05425 -0.9 -3.0 EEP domain-containing protein compare
BWI76_RS09515 -0.9 -2.6 arginine ABC transporter substrate-binding protein compare
BWI76_RS09085 -0.9 -4.1 molybdopterin molybdenumtransferase MoeA compare
BWI76_RS01885 -0.9 -1.3 CsbD family protein compare
BWI76_RS27430 -0.9 -0.9 (p)ppGpp synthetase compare
BWI76_RS15600 -0.9 -2.2 hypothetical protein compare
BWI76_RS09895 -0.9 -2.0 aliphatic sulfonates ABC transporter ATP-binding protein compare
BWI76_RS06635 -0.9 -2.5 methylated-DNA--protein-cysteine methyltransferase compare


Specific Phenotypes

For 3 genes in this experiment

For supernatant Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted in Klebsiella michiganensis M5al

For supernatant Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted across organisms