Experiment set10IT083 for Cupriavidus basilensis FW507-4G11

Compare to:

Protocatechuic Acid carbon source

Genes with specific phenotypes:

  gene name fitness t score description  
RR42_RS32060 -4.6 -5.5 protocatechuate 3,4-dioxygenase conserved
RR42_RS32065 -4.2 -6.9 protocatechuate 3,4-dioxygenase, beta subunit (EC 1.13.11.3) (from data) conserved
RR42_RS34380 -2.4 -7.5 dihydrolipoamide dehydrogenase compare
RR42_RS32565 -1.8 -5.5 MFS transporter compare
RR42_RS04545 -1.6 -5.9 deacetylase compare
RR42_RS05985 -1.5 -7.1 esterase compare
RR42_RS26295 +1.2 7.7 GntR family transcriptional regulator compare
RR42_RS18805 +1.4 6.9 peptidase compare
RR42_RS13385 +1.6 8.9 peptide ABC transporter substrate-binding protein compare
RR42_RS30955 +1.6 5.2 histidine kinase compare
RR42_RS28940 +1.6 10.9 Bcr/CflA family drug resistance efflux transporter compare
RR42_RS13380 +1.8 6.9 microcin ABC transporter permease compare
RR42_RS13375 +1.9 8.6 peptide ABC transporter permease compare
RR42_RS30525 +2.1 7.1 LysR family transcriptional regulator compare
RR42_RS37050 +2.2 11.3 ABC transporter permease compare
RR42_RS37040 +2.9 20.7 sulfite reductase subunit alpha compare
RR42_RS37060 +2.9 16.7 membrane protein compare
RR42_RS30520 +3.1 5.1 gentisate 1,2-dioxygenase compare
RR42_RS37055 +3.2 5.9 hypothetical protein compare
RR42_RS30505 +3.6 6.3 salicylate hydroxylase compare
RR42_RS32970 +5.0 7.7 benzoylformate decarboxylase conserved
RR42_RS30515 +5.2 8.4 5-carboxymethyl-2-hydroxymuconate isomerase compare
RR42_RS31695 +5.4 11.3 hypothetical protein compare


Specific phenotypes for carbon source Protocatechuic Acid across organisms