Experiment set10IT082 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x

200 most important genes:

  gene name fitness t score description  
BWI76_RS01210 -6.8 -5.6 tyrosine recombinase XerC compare
BWI76_RS21475 -6.0 -7.9 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS18940 -5.6 -7.6 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS23360 -5.5 -5.3 diaminopimelate decarboxylase compare
BWI76_RS23920 -5.3 -6.0 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS04160 -5.2 -6.4 phosphoserine phosphatase compare
BWI76_RS09660 -5.1 -3.5 DNA translocase FtsK compare
BWI76_RS04465 -4.9 -5.8 carbamoyl-phosphate synthase small subunit compare
BWI76_RS09755 -4.9 -8.0 phosphoserine transaminase compare
BWI76_RS07070 -4.8 -5.0 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS23240 -4.8 -4.6 exonuclease V subunit gamma compare
BWI76_RS09760 -4.7 -5.2 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS24400 -4.7 -6.4 outer membrane channel protein TolC compare
BWI76_RS26085 -4.6 -4.2 3-dehydroquinate synthase compare
BWI76_RS18935 -4.5 -9.1 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS23230 -4.5 -3.1 exodeoxyribonuclease V subunit beta compare
BWI76_RS05840 -4.5 -7.0 glutamate 5-kinase compare
BWI76_RS01615 -4.4 -11.4 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS04470 -4.4 -11.6 carbamoyl phosphate synthase large subunit compare
BWI76_RS20895 -4.2 -6.9 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS18930 -4.2 -5.9 histidinol-phosphate transaminase compare
BWI76_RS18925 -4.1 -7.4 histidinol dehydrogenase compare
BWI76_RS04255 -4.1 -12.7 threonine synthase compare
BWI76_RS18140 -4.0 -7.0 zinc ABC transporter permease compare
BWI76_RS09970 -3.9 -8.2 porin OmpA compare
BWI76_RS21265 -3.9 -14.1 phosphoribosylformylglycinamidine synthase compare
BWI76_RS01610 -3.9 -8.6 phosphoribosylamine--glycine ligase compare
BWI76_RS25215 -3.8 -8.1 phospholipid-binding protein MlaC compare
BWI76_RS04645 -3.7 -5.2 3-dehydroquinase compare
BWI76_RS21070 -3.7 -3.9 outer membrane protein assembly factor BamB compare
BWI76_RS00850 -3.7 -8.7 acetylglutamate kinase compare
BWI76_RS00990 -3.6 -11.0 ketol-acid reductoisomerase compare
BWI76_RS08385 -3.6 -5.8 citrate (Si)-synthase compare
BWI76_RS25225 -3.6 -9.9 ABC transporter permease compare
BWI76_RS04250 -3.6 -10.1 homoserine kinase compare
BWI76_RS20965 -3.5 -4.9 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS02995 -3.5 -10.1 aspartate carbamoyltransferase compare
BWI76_RS06780 -3.5 -9.6 MexE family multidrug efflux RND transporter periplasmic adaptor subunit compare
BWI76_RS03010 -3.5 -10.3 ornithine carbamoyltransferase compare
BWI76_RS04240 -3.4 -2.8 thr operon leader peptide compare
BWI76_RS18950 -3.4 -2.9 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS07065 -3.4 -10.9 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS20435 -3.4 -2.0 chorismate synthase compare
BWI76_RS00835 -3.4 -16.1 phosphoenolpyruvate carboxylase compare
BWI76_RS25115 -3.4 -5.5 argininosuccinate synthase compare
BWI76_RS00845 -3.4 -8.8 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS25645 -3.4 -8.8 shikimate dehydrogenase compare
BWI76_RS20350 -3.3 -9.3 amidophosphoribosyltransferase compare
BWI76_RS00400 -3.3 -2.2 glutamine synthetase compare
BWI76_RS00855 -3.3 -8.4 argininosuccinate lyase compare
BWI76_RS04675 -3.3 -9.3 3-isopropylmalate dehydrogenase compare
BWI76_RS23220 -3.2 -10.7 amino-acid N-acetyltransferase compare
BWI76_RS26570 -3.2 -4.3 anion permease compare
BWI76_RS08495 -3.2 -7.3 cytochrome bd-I ubiquinol oxidase subunit I compare
BWI76_RS25230 -3.2 -10.0 phospholipid ABC transporter ATP-binding protein MlaF compare
BWI76_RS04665 -3.2 -20.3 3-isopropylmalate dehydratase small subunit compare
BWI76_RS18130 -3.1 -4.1 zinc ABC transporter substrate-binding protein compare
BWI76_RS00980 -3.1 -13.1 PLP-dependent threonine dehydratase compare
BWI76_RS01655 -3.1 -10.6 homoserine O-succinyltransferase compare
BWI76_RS09635 -3.1 -3.5 amino acid ABC transporter ATP-binding protein compare
BWI76_RS04245 -3.0 -15.4 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS06775 -3.0 -15.3 multidrug efflux RND transporter permease subunit compare
BWI76_RS11855 -3.0 -8.1 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS18955 -3.0 -7.8 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS23365 -3.0 -8.8 LysR family transcriptional regulator compare
BWI76_RS11840 -3.0 -4.2 tryptophan synthase subunit alpha compare
BWI76_RS05015 -3.0 -2.8 transcriptional regulator compare
BWI76_RS00975 -3.0 -9.2 dihydroxy-acid dehydratase compare
BWI76_RS20355 -3.0 -4.6 colicin V production protein compare
BWI76_RS04530 -2.9 -2.0 peptidylprolyl isomerase SurA compare
BWI76_RS18920 -2.8 -5.2 ATP phosphoribosyltransferase compare
BWI76_RS11850 -2.8 -11.6 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS10990 -2.8 -2.4 dihydroorotase compare
BWI76_RS00805 -2.8 -7.6 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS04670 -2.8 -9.8 3-isopropylmalate dehydratase large subunit compare
BWI76_RS00785 -2.8 -8.0 cystathionine gamma-synthase compare
BWI76_RS25220 -2.8 -3.6 outer membrane lipid asymmetry maintenance protein MlaD compare
BWI76_RS18135 -2.7 -6.2 zinc ABC transporter ATP-binding protein ZnuC compare
BWI76_RS25335 -2.7 -6.2 stringent starvation protein A compare
BWI76_RS04715 -2.7 -3.2 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS26200 -2.7 -5.9 starch synthase compare
BWI76_RS09645 -2.6 -2.9 thioredoxin-disulfide reductase compare
BWI76_RS24285 -2.6 -9.6 cystathionine beta-lyase compare
BWI76_RS09640 -2.6 -3.3 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS20475 -2.6 -5.9 phospholipid-binding lipoprotein MlaA compare
BWI76_RS26460 -2.6 -7.6 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS08525 -2.5 -3.5 colicin transporter compare
BWI76_RS26000 -2.5 -9.3 aspartate aminotransferase family protein compare
BWI76_RS11965 -2.5 -6.9 orotidine-5'-phosphate decarboxylase compare
BWI76_RS04685 -2.5 -10.3 putative leucine operon leader peptide compare
BWI76_RS27310 -2.5 -8.8 glycosyltransferase compare
BWI76_RS11845 -2.5 -4.5 tryptophan synthase subunit beta compare
BWI76_RS05835 -2.4 -3.1 gamma-glutamyl-phosphate reductase compare
BWI76_RS27390 -2.4 -5.1 ribonuclease PH compare
BWI76_RS08500 -2.3 -5.5 cytochrome d ubiquinol oxidase subunit 2 compare
BWI76_RS15825 -2.3 -4.8 hypothetical protein compare
BWI76_RS04680 -2.3 -11.7 2-isopropylmalate synthase compare
BWI76_RS26455 -2.3 -4.2 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS09910 -2.3 -16.4 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS11860 -2.3 -9.9 anthranilate synthase component I compare
BWI76_RS09655 -2.3 -6.8 leucine-responsive regulatory protein compare
BWI76_RS08530 -2.2 -2.7 protein TolA compare
BWI76_RS00960 -2.2 -7.4 acetolactate synthase 2 catalytic subunit compare
BWI76_RS05200 -2.2 -3.1 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS09190 -2.1 -6.7 hypothetical protein compare
BWI76_RS15115 -2.1 -9.1 MFS transporter compare
BWI76_RS02410 -2.1 -2.7 EF-P beta-lysylation protein EpmB compare
BWI76_RS12090 -2.1 -3.0 HNH endonuclease compare
BWI76_RS01200 -2.0 -2.6 diaminopimelate epimerase compare
BWI76_RS23265 -2.0 -4.9 hypothetical protein compare
BWI76_RS05135 -2.0 -4.0 iron-hydroxamate transporter substrate-binding subunit compare
BWI76_RS00345 -1.9 -4.3 protein disulfide oxidoreductase DsbA compare
BWI76_RS25600 -1.9 -1.4 tRNA-Thr compare
BWI76_RS21480 -1.9 -5.9 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BWI76_RS26665 -1.9 -3.9 DNA-binding response regulator compare
BWI76_RS16965 -1.8 -3.8 murein lipoprotein compare
BWI76_RS21465 -1.8 -4.3 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS00965 -1.8 -1.5 acetolactate synthase 2 small subunit compare
BWI76_RS21350 -1.7 -1.8 anti-RNA polymerase sigma factor SigE compare
BWI76_RS15110 -1.7 -11.3 putative excinuclease ABC subunit A compare
BWI76_RS15660 -1.7 -2.1 hypothetical protein compare
BWI76_RS20440 -1.7 -2.1 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS26075 -1.6 -3.5 DNA adenine methylase compare
BWI76_RS26405 -1.6 -2.0 16S rRNA (guanine(966)-N(2))-methyltransferase compare
BWI76_RS17720 -1.6 -1.7 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS21370 -1.6 -2.1 ATP-dependent RNA helicase SrmB compare
BWI76_RS27385 -1.6 -6.6 orotate phosphoribosyltransferase compare
BWI76_RS18360 -1.5 -2.4 aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase family protein compare
BWI76_RS24885 -1.5 -2.5 PTS galactitol transporter subunit IIB compare
BWI76_RS24280 -1.5 -4.2 biopolymer transporter ExbB compare
BWI76_RS07780 -1.5 -1.8 hypothetical protein compare
BWI76_RS11275 -1.5 -5.6 sensor protein PhoQ compare
BWI76_RS19845 -1.5 -3.9 phosphatase compare
BWI76_RS01325 -1.5 -2.5 twin-arginine translocase subunit TatB compare
BWI76_RS23480 -1.4 -7.0 EAL domain-containing protein compare
BWI76_RS27875 -1.4 -1.8 membrane protein compare
BWI76_RS22755 -1.4 -6.2 phosphoadenosine phosphosulfate reductase compare
BWI76_RS26670 -1.4 -6.5 two-component sensor histidine kinase compare
BWI76_RS16215 -1.4 -5.1 hypothetical protein compare
BWI76_RS01085 -1.4 -6.4 polysaccharide chain length modulation protein compare
BWI76_RS10575 -1.4 -2.2 polar amino acid ABC transporter permease compare
BWI76_RS21000 -1.4 -5.3 exopolyphosphatase compare
BWI76_RS17190 -1.4 -2.6 TonB system transport protein TonB compare
BWI76_RS19805 -1.4 -3.2 Bcr/CflA family multidrug efflux MFS transporter compare
BWI76_RS26390 -1.3 -4.1 cell division protein FtsX compare
BWI76_RS06770 -1.3 -8.7 Hha toxicity attenuator compare
BWI76_RS22645 -1.3 -5.2 RNA polymerase sigma factor RpoS compare
BWI76_RS23930 -1.3 -6.0 transcriptional regulator ArgP compare
BWI76_RS01220 -1.3 -5.9 DNA-dependent helicase II compare
BWI76_RS11150 -1.3 -2.4 membrane protein compare
BWI76_RS09650 -1.3 -6.1 hypothetical protein compare
BWI76_RS15830 -1.3 -2.8 hypothetical protein compare
BWI76_RS00985 -1.3 -4.8 transcriptional regulator IlvY compare
BWI76_RS07730 -1.2 -1.6 iron-enterobactin transporter membrane protein compare
BWI76_RS05260 -1.2 -1.7 chaperone compare
BWI76_RS17000 -1.2 -5.3 Fe-S cluster assembly scaffold SufA compare
BWI76_RS15810 -1.2 -5.4 hypothetical protein compare
BWI76_RS10475 -1.2 -4.3 binding-protein-dependent transport system inner membrane protein compare
BWI76_RS22625 -1.2 -2.3 transcriptional regulator compare
BWI76_RS25065 -1.2 -1.8 polyribonucleotide nucleotidyltransferase compare
BWI76_RS25320 -1.2 -5.9 glutamate synthase compare
BWI76_RS24275 -1.1 -3.9 biopolymer transport protein ExbD compare
BWI76_RS04100 -1.1 -3.8 peptide chain release factor 3 compare
BWI76_RS06740 -1.1 -2.5 50S ribosomal protein L36 compare
BWI76_RS12950 -1.1 -3.1 acriflavin resistance protein AcrA compare
BWI76_RS24900 -1.1 -1.7 DeoR family transcriptional regulator compare
BWI76_RS19035 -1.1 -5.6 dTDP-rhamnosyl transferase compare
BWI76_RS23830 -1.1 -5.4 hypothetical protein compare
BWI76_RS00875 -1.1 -4.3 DNA-binding transcriptional regulator FabR compare
BWI76_RS23915 -1.1 -1.8 5-formyltetrahydrofolate cyclo-ligase compare
BWI76_RS16975 -1.1 -4.5 cysteine desufuration protein SufE compare
BWI76_RS02735 -1.1 -3.5 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS27290 -1.1 -5.4 hypothetical protein compare
BWI76_RS11610 -1.1 -2.4 glutamate dehydrogenase compare
BWI76_RS00760 -1.1 -3.5 cell division protein FtsN compare
BWI76_RS06765 -1.1 -2.7 transcriptional regulator compare
BWI76_RS01925 -1.1 -6.2 aromatic amino acid aminotransferase compare
BWI76_RS27430 -1.0 -1.4 (p)ppGpp synthetase compare
BWI76_RS16995 -1.0 -5.2 Fe-S cluster assembly protein SufB compare
BWI76_RS01795 -1.0 -4.4 hypothetical protein compare
BWI76_RS01090 -1.0 -3.4 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
BWI76_RS09030 -1.0 -3.7 transpeptidase compare
BWI76_RS27820 -1.0 -2.1 ilvB operon leader peptide IvbL compare
BWI76_RS24605 -1.0 -5.8 dihydroxyacetone kinase subunit DhaM compare
BWI76_RS20650 -1.0 -1.4 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS15840 -1.0 -3.3 prophage protein compare
BWI76_RS17290 -1.0 -3.4 formyltetrahydrofolate deformylase compare
BWI76_RS24580 -1.0 -4.0 PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR compare
BWI76_RS26395 -1.0 -3.1 cell division protein FtsE compare
BWI76_RS24600 -1.0 -4.5 dihydroxyacetone kinase compare
BWI76_RS25960 -1.0 -2.6 NUDIX hydrolase compare
BWI76_RS22760 -1.0 -3.9 sulfite reductase subunit beta compare
BWI76_RS03045 -1.0 -1.3 hypothetical protein compare
BWI76_RS01885 -1.0 -1.5 CsbD family protein compare
BWI76_RS01790 -1.0 -5.8 lysine-sensitive aspartokinase 3 compare
BWI76_RS03105 -1.0 -1.2 myo-inosose-2 dehydratase compare
BWI76_RS10480 -1.0 -5.1 amino acid ABC transporter substrate-binding protein compare
BWI76_RS25060 -1.0 -2.7 lipoprotein NlpI compare
BWI76_RS22095 -1.0 -2.6 multidrug export protein EmrA compare
BWI76_RS16990 -1.0 -3.9 ABC transporter ATP-binding protein compare


Specific Phenotypes

For 3 genes in this experiment

For supernatant Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted in Klebsiella michiganensis M5al

For supernatant Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted across organisms