Experiment set10IT081 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x

200 most important genes:

  gene name fitness t score description  
BWI76_RS04160 -5.9 -6.9 phosphoserine phosphatase compare
BWI76_RS23360 -5.6 -3.5 diaminopimelate decarboxylase compare
BWI76_RS01210 -5.2 -3.8 tyrosine recombinase XerC compare
BWI76_RS09755 -4.2 -9.3 phosphoserine transaminase compare
BWI76_RS26085 -4.0 -2.7 3-dehydroquinate synthase compare
BWI76_RS09760 -4.0 -5.8 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS01325 -3.6 -2.3 twin-arginine translocase subunit TatB compare
BWI76_RS04305 -3.5 -1.1 molecular chaperone DnaJ compare
BWI76_RS05835 -3.5 -2.9 gamma-glutamyl-phosphate reductase compare
BWI76_RS00855 -3.5 -7.8 argininosuccinate lyase compare
BWI76_RS09660 -3.5 -3.0 DNA translocase FtsK compare
BWI76_RS04645 -3.5 -6.1 3-dehydroquinase compare
BWI76_RS23230 -3.4 -3.3 exodeoxyribonuclease V subunit beta compare
BWI76_RS26570 -3.3 -3.2 anion permease compare
BWI76_RS17400 -3.3 -1.5 transporter compare
BWI76_RS08385 -3.3 -3.8 citrate (Si)-synthase compare
BWI76_RS09970 -3.3 -5.4 porin OmpA compare
BWI76_RS05840 -3.2 -5.0 glutamate 5-kinase compare
BWI76_RS21070 -3.2 -2.6 outer membrane protein assembly factor BamB compare
BWI76_RS01610 -3.1 -8.2 phosphoribosylamine--glycine ligase compare
BWI76_RS20435 -3.1 -1.3 chorismate synthase compare
BWI76_RS23920 -3.1 -5.0 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS02580 -3.0 -1.6 23S rRNA (guanosine(2251)-2'-O)-methyltransferase compare
BWI76_RS17720 -2.9 -1.3 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS21265 -2.9 -9.8 phosphoribosylformylglycinamidine synthase compare
BWI76_RS25115 -2.9 -6.8 argininosuccinate synthase compare
BWI76_RS02410 -2.8 -1.9 EF-P beta-lysylation protein EpmB compare
BWI76_RS27310 -2.8 -9.8 glycosyltransferase compare
BWI76_RS07070 -2.8 -5.0 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS01615 -2.7 -9.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS04250 -2.7 -7.0 homoserine kinase compare
BWI76_RS21370 -2.7 -1.5 ATP-dependent RNA helicase SrmB compare
BWI76_RS18935 -2.7 -5.6 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS16210 -2.7 -1.5 hypothetical protein compare
BWI76_RS23240 -2.7 -4.7 exonuclease V subunit gamma compare
BWI76_RS11980 -2.7 -2.0 DeoR family transcriptional regulator compare
BWI76_RS21475 -2.6 -4.1 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS00835 -2.6 -12.9 phosphoenolpyruvate carboxylase compare
BWI76_RS20895 -2.6 -3.7 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS05200 -2.6 -2.9 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS24400 -2.6 -6.8 outer membrane channel protein TolC compare
BWI76_RS04255 -2.5 -7.0 threonine synthase compare
BWI76_RS25920 -2.5 -1.9 peptidylprolyl isomerase compare
BWI76_RS20965 -2.5 -3.1 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS20355 -2.5 -4.5 colicin V production protein compare
BWI76_RS04470 -2.4 -7.5 carbamoyl phosphate synthase large subunit compare
BWI76_RS09640 -2.4 -3.9 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS06765 -2.4 -1.6 transcriptional regulator compare
BWI76_RS25225 -2.4 -5.3 ABC transporter permease compare
BWI76_RS00850 -2.4 -5.4 acetylglutamate kinase compare
BWI76_RS04465 -2.4 -4.8 carbamoyl-phosphate synthase small subunit compare
BWI76_RS23220 -2.4 -5.8 amino-acid N-acetyltransferase compare
BWI76_RS25230 -2.4 -6.5 phospholipid ABC transporter ATP-binding protein MlaF compare
BWI76_RS03010 -2.4 -6.6 ornithine carbamoyltransferase compare
BWI76_RS15660 -2.3 -1.4 hypothetical protein compare
BWI76_RS07640 -2.3 -1.5 short chain dehydrogenase compare
BWI76_RS21685 -2.3 -1.6 hypothetical protein compare
BWI76_RS26455 -2.3 -2.1 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS24585 -2.2 -3.1 glycerol dehydrogenase compare
BWI76_RS16470 -2.2 -1.4 transcriptional repressor NemR compare
BWI76_RS26390 -2.2 -4.7 cell division protein FtsX compare
BWI76_RS06780 -2.1 -5.7 MexE family multidrug efflux RND transporter periplasmic adaptor subunit compare
BWI76_RS07065 -2.1 -4.9 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS23365 -2.1 -5.9 LysR family transcriptional regulator compare
BWI76_RS04240 -2.1 -2.4 thr operon leader peptide compare
BWI76_RS15835 -2.0 -1.4 hypothetical protein compare
BWI76_RS27455 -2.0 -2.5 DUF805 domain-containing protein compare
BWI76_RS08500 -2.0 -3.1 cytochrome d ubiquinol oxidase subunit 2 compare
BWI76_RS08330 -2.0 -1.4 hypothetical protein compare
BWI76_RS04670 -2.0 -7.1 3-isopropylmalate dehydratase large subunit compare
BWI76_RS26665 -2.0 -2.4 DNA-binding response regulator compare
BWI76_RS00400 -2.0 -1.5 glutamine synthetase compare
BWI76_RS25215 -1.9 -4.5 phospholipid-binding protein MlaC compare
BWI76_RS04665 -1.9 -11.8 3-isopropylmalate dehydratase small subunit compare
BWI76_RS25220 -1.9 -2.3 outer membrane lipid asymmetry maintenance protein MlaD compare
BWI76_RS00975 -1.9 -8.3 dihydroxy-acid dehydratase compare
BWI76_RS04245 -1.9 -10.2 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS23480 -1.9 -8.7 EAL domain-containing protein compare
BWI76_RS06775 -1.9 -7.2 multidrug efflux RND transporter permease subunit compare
BWI76_RS04675 -1.9 -4.6 3-isopropylmalate dehydrogenase compare
BWI76_RS15215 -1.9 -1.1 N-acetyltransferase compare
BWI76_RS09635 -1.9 -2.0 amino acid ABC transporter ATP-binding protein compare
BWI76_RS01330 -1.9 -2.7 twin-arginine translocase subunit TatC compare
BWI76_RS26395 -1.9 -2.0 cell division protein FtsE compare
BWI76_RS08525 -1.8 -2.3 colicin transporter compare
BWI76_RS02530 -1.8 -1.5 tRNA dimethylallyltransferase compare
BWI76_RS13560 -1.8 -1.1 amino acid ABC transporter substrate-binding subunit compare
BWI76_RS17190 -1.8 -1.6 TonB system transport protein TonB compare
BWI76_RS26405 -1.8 -1.5 16S rRNA (guanine(966)-N(2))-methyltransferase compare
BWI76_RS24600 -1.8 -3.3 dihydroxyacetone kinase compare
BWI76_RS18780 -1.7 -2.1 D-alanyl-D-alanine carboxypeptidase compare
BWI76_RS00760 -1.7 -3.3 cell division protein FtsN compare
BWI76_RS27780 -1.7 -2.1 hypothetical protein compare
BWI76_RS04100 -1.7 -3.3 peptide chain release factor 3 compare
BWI76_RS01795 -1.7 -3.9 hypothetical protein compare
BWI76_RS20350 -1.7 -3.3 amidophosphoribosyltransferase compare
BWI76_RS17000 -1.7 -3.3 Fe-S cluster assembly scaffold SufA compare
BWI76_RS18925 -1.7 -5.6 histidinol dehydrogenase compare
BWI76_RS00845 -1.7 -4.0 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS20475 -1.6 -4.3 phospholipid-binding lipoprotein MlaA compare
BWI76_RS07380 -1.6 -2.0 hypothetical protein compare
BWI76_RS11235 -1.6 -1.0 hypothetical protein compare
BWI76_RS21165 -1.6 -1.3 Fe-S cluster assembly transcriptional regulator IscR compare
BWI76_RS02995 -1.6 -4.2 aspartate carbamoyltransferase compare
BWI76_RS05450 -1.6 -1.2 ribonuclease HI compare
BWI76_RS18930 -1.6 -3.6 histidinol-phosphate transaminase compare
BWI76_RS25070 -1.6 -1.1 hypothetical protein compare
BWI76_RS08720 -1.6 -1.8 imidazolonepropionase compare
BWI76_RS12860 -1.6 -1.5 hypothetical protein compare
BWI76_RS16150 -1.5 -2.1 IclR family transcriptional regulator compare
BWI76_RS18955 -1.5 -3.0 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS25960 -1.5 -3.7 NUDIX hydrolase compare
BWI76_RS18940 -1.5 -2.1 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS05175 -1.5 -10.5 dGTPase compare
BWI76_RS00805 -1.5 -3.4 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS15850 -1.5 -2.5 DUF1317 domain-containing protein compare
BWI76_RS04955 -1.5 -1.5 hypoxanthine phosphoribosyltransferase compare
BWI76_RS09655 -1.5 -3.1 leucine-responsive regulatory protein compare
BWI76_RS27875 -1.5 -1.2 membrane protein compare
BWI76_RS26775 -1.5 -4.3 endo-1,4-D-glucanase compare
BWI76_RS06475 -1.5 -1.2 protoheme IX farnesyltransferase compare
BWI76_RS15825 -1.5 -1.4 hypothetical protein compare
BWI76_RS12195 -1.5 -3.3 hypothetical protein compare
BWI76_RS19035 -1.5 -5.1 dTDP-rhamnosyl transferase compare
BWI76_RS26460 -1.5 -3.9 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS11110 -1.5 -2.3 cell division protein YceG compare
BWI76_RS08495 -1.5 -3.0 cytochrome bd-I ubiquinol oxidase subunit I compare
BWI76_RS16980 -1.5 -2.9 bifunctional cysteine desulfurase/selenocysteine lyase compare
BWI76_RS18195 -1.5 -3.0 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB compare
BWI76_RS19805 -1.5 -2.8 Bcr/CflA family multidrug efflux MFS transporter compare
BWI76_RS15115 -1.4 -4.2 MFS transporter compare
BWI76_RS23690 -1.4 -1.1 putative glyoxalase/bleomycin resistance protein/dioxygenase compare
BWI76_RS13220 -1.4 -2.2 N-acetyltransferase compare
BWI76_RS27290 -1.4 -7.0 hypothetical protein compare
BWI76_RS21810 -1.4 -1.2 universal stress protein compare
BWI76_RS12330 -1.4 -1.7 hypothetical protein compare
BWI76_RS00960 -1.4 -4.4 acetolactate synthase 2 catalytic subunit compare
BWI76_RS25645 -1.4 -5.7 shikimate dehydrogenase compare
BWI76_RS13215 -1.4 -1.1 type I glyceraldehyde-3-phosphate dehydrogenase compare
BWI76_RS11965 -1.4 -3.1 orotidine-5'-phosphate decarboxylase compare
BWI76_RS18135 -1.4 -2.7 zinc ABC transporter ATP-binding protein ZnuC compare
BWI76_RS25335 -1.4 -2.1 stringent starvation protein A compare
BWI76_RS19935 -1.4 -1.4 hypothetical protein compare
BWI76_RS20845 -1.4 -1.7 GDP-mannose pyrophosphatase NudK compare
BWI76_RS18140 -1.3 -1.4 zinc ABC transporter permease compare
BWI76_RS26670 -1.3 -5.3 two-component sensor histidine kinase compare
BWI76_RS10245 -1.3 -1.5 aspartate aminotransferase compare
BWI76_RS20720 -1.3 -1.2 hypothetical protein compare
BWI76_RS20340 -1.3 -2.2 histidine ABC transporter substrate-binding protein HisJ compare
BWI76_RS00875 -1.3 -4.4 DNA-binding transcriptional regulator FabR compare
BWI76_RS04680 -1.3 -5.9 2-isopropylmalate synthase compare
BWI76_RS25245 -1.3 -1.8 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase compare
BWI76_RS13130 -1.3 -1.6 phenylacetic acid degradation protein PaaD compare
BWI76_RS13125 -1.3 -3.4 3-hydroxyacyl-CoA dehydrogenase compare
BWI76_RS10470 -1.3 -2.1 iron ABC transporter substrate-binding protein compare
BWI76_RS00990 -1.3 -4.0 ketol-acid reductoisomerase compare
BWI76_RS23125 -1.3 -1.0 propanediol dehydratase small subunit compare
BWI76_RS01790 -1.3 -6.2 lysine-sensitive aspartokinase 3 compare
BWI76_RS06770 -1.3 -5.2 Hha toxicity attenuator compare
BWI76_RS06735 -1.3 -1.2 50S ribosomal protein L31 compare
BWI76_RS21480 -1.3 -6.0 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BWI76_RS23825 -1.3 -3.6 hypothetical protein compare
BWI76_RS24280 -1.3 -2.5 biopolymer transporter ExbB compare
BWI76_RS15635 -1.2 -3.0 hypothetical protein compare
BWI76_RS08380 -1.2 -0.9 endonuclease VIII compare
BWI76_RS16990 -1.2 -2.5 ABC transporter ATP-binding protein compare
BWI76_RS27305 -1.2 -3.8 glycosyl transferase compare
BWI76_RS12610 -1.2 -2.5 LysR family transcriptional regulator compare
BWI76_RS23030 -1.2 -1.2 cobalamin biosynthesis protein CbiM compare
BWI76_RS24910 -1.2 -3.0 rRNA (cytidine-2'-O-)-methyltransferase compare
BWI76_RS24900 -1.2 -1.2 DeoR family transcriptional regulator compare
BWI76_RS15290 -1.2 -1.0 transcriptional regulator compare
BWI76_RS00345 -1.2 -1.8 protein disulfide oxidoreductase DsbA compare
BWI76_RS11840 -1.2 -2.0 tryptophan synthase subunit alpha compare
BWI76_RS05075 -1.2 -0.8 type II secretion system protein GspG compare
BWI76_RS20050 -1.2 -1.0 hypothetical protein compare
BWI76_RS04685 -1.2 -4.4 putative leucine operon leader peptide compare
BWI76_RS04515 -1.2 -1.0 Co2+/Mg2+ efflux protein ApaG compare
BWI76_RS11010 -1.2 -2.6 30S ribosomal protein S5 alanine N-acetyltransferase compare
BWI76_RS17290 -1.2 -3.0 formyltetrahydrofolate deformylase compare
BWI76_RS19010 -1.2 -2.3 polysaccharide pyruvyl transferase yvff compare
BWI76_RS12070 -1.2 -0.9 hypothetical protein compare
BWI76_RS08535 -1.2 -1.1 translocation protein TolB compare
BWI76_RS12955 -1.2 -5.3 multidrug efflux RND transporter permease subunit OqxB compare
BWI76_RS20715 -1.2 -1.5 RpoE-regulated lipoprotein compare
BWI76_RS13435 -1.1 -1.2 hypothetical protein compare
BWI76_RS18950 -1.1 -3.2 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS21565 -1.1 -0.9 outer membrane protein assembly factor BamE compare
BWI76_RS05045 -1.1 -1.4 general secretion pathway protein GspM compare
BWI76_RS16935 -1.1 -0.8 shikimate dehydrogenase compare
BWI76_RS15810 -1.1 -3.3 hypothetical protein compare
BWI76_RS10655 -1.1 -1.7 [formate-C-acetyltransferase]-activating enzyme compare
BWI76_RS21285 -1.1 -1.1 HAD family hydrolase compare
BWI76_RS10475 -1.1 -2.3 binding-protein-dependent transport system inner membrane protein compare
BWI76_RS01650 -1.1 -2.2 acetyltransferase compare
BWI76_RS16215 -1.1 -2.2 hypothetical protein compare
BWI76_RS06295 -1.1 -4.3 S-adenosylmethionine:tRNA ribosyltransferase-isomerase compare
BWI76_RS22935 -1.1 -1.3 L-fucose mutarotase compare
BWI76_RS12975 -1.1 -2.5 type I glyceraldehyde-3-phosphate dehydrogenase compare
BWI76_RS09650 -1.1 -4.0 hypothetical protein compare


Specific Phenotypes

For 5 genes in this experiment

For supernatant Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted in Klebsiella michiganensis M5al

For supernatant Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted across organisms