Experiment set10IT081 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS22120 +7.8 68.4 glutamate--cysteine ligase compare
BWI76_RS24075 +7.5 34.5 glutathione synthase compare
BWI76_RS07465 +7.5 24.4 TetR family transcriptional regulator compare
BWI76_RS20995 +6.5 38.6 RNA degradosome polyphosphate kinase compare
BWI76_RS01070 +6.4 35.6 thiol reductase thioredoxin compare
BWI76_RS00140 +6.3 9.7 phosphate transport system regulator PhoU compare
BWI76_RS26685 +6.2 33.1 glutathione-disulfide reductase compare
BWI76_RS27675 +5.8 28.6 EmrB/QacA family drug resistance transporter compare
BWI76_RS20640 +5.7 21.7 cysteine synthase A compare
BWI76_RS22090 +3.2 6.9 transcriptional regulator compare
BWI76_RS09645 +3.2 6.9 thioredoxin-disulfide reductase compare
BWI76_RS10305 +3.2 8.8 transposase compare
BWI76_RS26095 +3.1 5.1 shikimate kinase compare
BWI76_RS06785 +2.7 12.2 DNA-binding transcriptional repressor AcrR compare
BWI76_RS22085 +2.7 4.1 L-valine transporter subunit YgaH compare
BWI76_RS17915 +2.3 9.3 membrane protein compare
BWI76_RS24500 +2.1 2.1 urease subunit gamma compare
BWI76_RS17910 +2.1 6.9 hypothetical protein compare
BWI76_RS08585 +2.0 1.3 nicotinamide riboside transporter PnuC compare
BWI76_RS02690 +1.9 4.3 hypothetical protein compare
BWI76_RS22815 +1.8 12.5 hybrid sensor histidine kinase/response regulator compare
BWI76_RS01890 +1.8 5.4 transcriptional regulator Zur compare
BWI76_RS16655 +1.6 2.1 CatA-like O-acetyltransferase compare
BWI76_RS24335 +1.6 2.6 two-component system response regulator QseB compare
BWI76_RS17080 +1.6 4.1 hypothetical protein compare
BWI76_RS04850 +1.6 4.9 N-acetylmuramoyl-L-alanine amidase compare
BWI76_RS00715 +1.6 3.9 two-component sensor histidine kinase compare
BWI76_RS06635 +1.5 1.1 methylated-DNA--protein-cysteine methyltransferase compare
BWI76_RS04705 +1.5 4.2 DNA-binding transcriptional regulator FruR compare
BWI76_RS12170 +1.5 2.4 hypothetical protein compare
BWI76_RS21075 +1.5 1.4 membrane protein compare
BWI76_RS06535 +1.5 5.8 endopeptidase La compare
BWI76_RS19025 +1.4 8.6 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) compare
BWI76_RS18335 +1.4 8.7 DNA-binding response regulator compare
BWI76_RS06190 +1.4 3.0 hypothetical protein compare
BWI76_RS14835 +1.4 1.3 hypothetical protein compare
BWI76_RS22130 +1.4 1.6 fructose-1-phosphate/6-phosphogluconate phosphatase compare
BWI76_RS00060 +1.4 1.9 N-acetylneuraminate lyase compare
BWI76_RS13095 +1.3 2.1 phenylacetate-CoA oxygenase subunit PaaB compare
BWI76_RS18745 +1.3 3.1 adenosylhomocysteinase compare
BWI76_RS11520 +1.3 1.8 hypothetical protein compare
BWI76_RS23540 +1.3 1.3 putative lysine exporter protein compare
BWI76_RS10955 +1.3 2.0 hypothetical protein compare
BWI76_RS01350 +1.3 1.4 NAD(P)H-flavin reductase compare
BWI76_RS16805 +1.2 1.8 basic amino acid ABC transporter substrate-binding protein compare
BWI76_RS24065 +1.2 1.7 deoxyribonuclease I compare
BWI76_RS05465 +1.2 1.1 amidohydrolase compare
BWI76_RS16015 +1.2 4.4 pheromone autoinducer 2 transporter compare
BWI76_RS13545 +1.2 1.4 N-acetyltransferase compare
BWI76_RS27735 +1.2 1.8 hypothetical protein compare
BWI76_RS26580 +1.2 4.7 universal stress protein A compare
BWI76_RS14075 +1.2 1.9 TetR family transcriptional regulator compare
BWI76_RS20735 +1.2 1.3 N-acetylmuramoyl-L-alanine amidase compare
BWI76_RS25280 +1.2 2.1 RNase adaptor protein RapZ compare
BWI76_RS11835 +1.2 1.4 putative regulatory protein MarR compare
BWI76_RS08765 +1.1 2.8 8-amino-7-oxononanoate synthase compare
BWI76_RS09935 +1.1 2.1 paraquat-inducible membrane protein A compare
BWI76_RS07470 +1.1 2.4 MBL fold metallo-hydrolase compare
BWI76_RS14110 +1.1 2.1 C-lysozyme inhibitor compare
BWI76_RS26185 +1.1 2.1 thiosulfate sulfurtransferase compare
BWI76_RS04655 +1.1 1.8 shikimate dehydrogenase compare
BWI76_RS09100 +1.1 5.9 glutathione ABC transporter substrate-binding protein GsiB compare
BWI76_RS07725 +1.1 0.9 iron-enterobactin transporter permease compare
BWI76_RS10040 +1.1 2.0 heat-shock protein HspQ compare
BWI76_RS05005 +1.1 2.5 polynucleotide adenylyltransferase compare
BWI76_RS01385 +1.1 2.4 potassium transporter compare
BWI76_RS09110 +1.1 1.9 glutathione ABC transporter permease GsiD compare
BWI76_RS03025 +1.1 2.0 N-acetyltransferase compare
BWI76_RS13965 +1.1 2.6 binding-protein-dependent transport system inner membrane protein compare
BWI76_RS03040 +1.1 2.1 leucyl aminopeptidase compare
BWI76_RS08405 +1.0 1.9 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS01285 +1.0 2.5 amino acid ABC transporter substrate-binding protein compare
BWI76_RS05440 +1.0 4.6 hydroxyacylglutathione hydrolase compare
BWI76_RS19100 +1.0 4.3 putative acid phosphatase compare
BWI76_RS18425 +1.0 2.7 phosphohydrolase compare
BWI76_RS14065 +1.0 1.4 hypothetical protein compare
BWI76_RS05645 +1.0 1.6 fructuronate reductase compare
BWI76_RS14665 +1.0 2.1 minor fimbrial subunit YfcQ compare
BWI76_RS11790 +1.0 2.3 acyl-CoA thioesterase compare
BWI76_RS01585 +1.0 3.7 transcriptional regulator compare
BWI76_RS27600 +1.0 2.8 tRNA-Sec compare
BWI76_RS00740 +1.0 2.0 ribonuclease E activity regulator RraA compare
BWI76_RS14505 +1.0 1.4 salicylate synthase Irp9 compare
BWI76_RS16195 +1.0 1.8 hypothetical protein compare
BWI76_RS04625 +1.0 2.6 glucose uptake inhibitor SgrT compare
BWI76_RS11185 +1.0 2.9 ligand-gated channel protein compare
BWI76_RS27425 +1.0 1.7 DNA-directed RNA polymerase subunit omega compare
BWI76_RS05790 +1.0 1.5 phage DNA-binding protein compare
BWI76_RS05880 +1.0 1.6 AraC-type DNA-binding domain-containing protein compare
BWI76_RS14980 +1.0 1.2 hypothetical protein compare
BWI76_RS17645 +1.0 1.1 hypothetical protein compare
BWI76_RS13610 +0.9 1.3 sugar transporter compare
BWI76_RS13150 +0.9 2.0 carnitine operon protein CaiE compare
BWI76_RS02445 +0.9 3.1 fumarate reductase subunit C compare
BWI76_RS04560 +0.9 1.0 holo-ACP synthase CitX compare
BWI76_RS00450 +0.9 1.5 formate dehydrogenase accessory protein FdhE compare
BWI76_RS00640 +0.9 1.7 L-rhamnose mutarotase compare
BWI76_RS09095 +0.9 3.8 glutathione ABC transporter ATP-binding protein GsiA compare
BWI76_RS03060 +0.9 2.2 ATP-binding protein compare
BWI76_RS20915 +0.9 3.6 peroxiredoxin compare
BWI76_RS17975 +0.9 2.2 tail-specific protease compare
BWI76_RS15190 +0.9 3.7 GGDEF domain-containing protein compare
BWI76_RS23895 +0.9 0.7 Xaa-Pro aminopeptidase compare
BWI76_RS12605 +0.9 2.1 hypothetical protein compare
BWI76_RS09825 +0.9 3.3 envelope biogenesis factor ElyC compare
BWI76_RS09025 +0.9 1.9 GntR family transcriptional regulator compare
BWI76_RS00940 +0.9 3.3 transcriptional regulator HdfR compare
BWI76_RS16810 +0.9 1.5 RpiR family transcriptional regulator compare
BWI76_RS09080 +0.9 1.6 molybdopterin-synthase adenylyltransferase MoeB compare
BWI76_RS08310 +0.9 0.9 potassium-transporting ATPase subunit C compare
BWI76_RS19785 +0.9 3.7 microcin C ABC transporter permease YejB compare
BWI76_RS01120 +0.9 3.2 O-antigen translocase compare
BWI76_RS15795 +0.9 2.6 bacteriophage CII family protein compare
BWI76_RS23755 +0.9 2.3 transcriptional regulator compare
BWI76_RS09670 +0.9 1.5 recombination factor protein RarA compare
BWI76_RS13715 +0.9 2.3 2-chlorobenzoate 1 2-dioxygenase electron transfer subunit compare
BWI76_RS22350 +0.9 1.0 hydrogenase nickel incorporation protein HypB compare
BWI76_RS06180 +0.9 1.5 hypothetical protein compare
BWI76_RS26205 +0.9 2.8 glucose-1-phosphate adenylyltransferase compare
BWI76_RS15270 +0.9 1.7 phenazine biosynthesis protein PhzF family compare
BWI76_RS01935 +0.9 1.7 thiamin phosphate synthase compare
BWI76_RS19900 +0.9 2.5 FAD:protein FMN transferase compare
BWI76_RS15050 +0.9 2.2 sugar transporter compare
BWI76_RS16200 +0.9 1.3 NAD(P) transhydrogenase subunit beta compare
BWI76_RS19050 +0.9 5.4 NAD(P)-dependent oxidoreductase compare
BWI76_RS11820 +0.8 1.0 short-chain dehydrogenase/reductase SDR compare
BWI76_RS04525 +0.8 0.7 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS22685 +0.8 3.2 hypothetical protein compare
BWI76_RS00340 +0.8 3.1 stress response kinase A compare
BWI76_RS24245 +0.8 3.5 bifunctional glutathionylspermidine amidase/glutathionylspermidine synthase compare
BWI76_RS03315 +0.8 1.3 clavaldehyde dehydrogenase compare
BWI76_RS10530 +0.8 1.2 GntR family transcriptional regulator with compare
BWI76_RS19565 +0.8 1.5 tRNA dihydrouridine(16) synthase DusC compare
BWI76_RS13315 +0.8 1.5 50S ribosomal protein L7/L12-serine acetyltransferase compare
BWI76_RS03125 +0.8 3.2 phosphodiesterase compare
BWI76_RS27670 +0.8 2.2 LysR family transcriptional regulator compare
BWI76_RS19365 +0.8 2.1 ribulokinase compare
BWI76_RS09390 +0.8 1.6 phage tail protein compare
BWI76_RS07185 +0.8 1.0 hypothetical protein compare
BWI76_RS21945 +0.8 1.4 LysR family transcriptional regulator compare
BWI76_RS08350 +0.8 2.2 carboxylase compare
BWI76_RS25855 +0.8 2.0 bacterioferritin compare
BWI76_RS11335 +0.8 0.9 tautomerase compare
BWI76_RS12745 +0.8 2.4 putative prophage membrane protein compare
BWI76_RS19500 +0.8 3.0 osmoprotectant uptake system permease compare
BWI76_RS07710 +0.8 2.2 invasin-like protein compare
BWI76_RS20795 +0.8 1.0 ethanolamine catabolic microcompartment shell protein EutN compare
BWI76_RS19055 +0.8 5.2 dTDP-4-dehydrorhamnose 3,5-epimerase compare
BWI76_RS11345 +0.8 3.1 LysR family transcriptional regulator compare
BWI76_RS05570 +0.8 0.8 hypothetical protein compare
BWI76_RS16965 +0.8 2.1 murein lipoprotein compare
BWI76_RS13240 +0.8 0.9 hypothetical protein compare
BWI76_RS12665 +0.8 1.8 hypothetical protein compare
BWI76_RS03610 +0.8 1.4 hypothetical protein compare
BWI76_RS08980 +0.8 1.0 DNA starvation/stationary phase protection protein compare
BWI76_RS18110 +0.8 2.5 transcriptional regulator HexR compare
BWI76_RS16275 +0.8 1.7 fumarate hydratase FumA compare
BWI76_RS18080 +0.8 1.5 protein YebE compare
BWI76_RS16455 +0.8 1.1 superoxide dismutase compare
BWI76_RS04170 +0.8 4.0 trifunctional nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase/transcriptional regulator NadR compare
BWI76_RS20610 +0.8 2.7 LysR family transcriptional regulator compare
BWI76_RS06665 +0.8 1.9 membrane protein compare
BWI76_RS08375 +0.8 1.6 pyroglutamyl-peptidase I compare
BWI76_RS11105 +0.8 1.4 aminodeoxychorismate lyase compare
BWI76_RS25870 +0.8 1.1 elongation factor Tu compare
BWI76_RS16510 +0.8 2.3 transcriptional repressor PurR compare
BWI76_RS15295 +0.8 2.2 MDR efflux pump AcrAB transcriptional activator MarA compare
BWI76_RS00725 +0.8 1.2 periplasmic repressor CpxP compare
BWI76_RS16950 +0.8 1.5 TetR family transcriptional regulator compare
BWI76_RS06625 +0.8 1.7 acyl-CoA thioesterase II compare
BWI76_RS16490 +0.8 1.3 glutaredoxin compare
BWI76_RS04060 +0.8 0.8 hypothetical protein compare
BWI76_RS02245 +0.7 1.5 hypothetical protein compare
BWI76_RS06465 +0.7 1.2 IclR family transcriptional regulator compare
BWI76_RS26270 +0.7 1.1 N-acetyltransferase compare
BWI76_RS26045 +0.7 1.8 nitrite reductase small subunit compare
BWI76_RS14780 +0.7 1.7 phosphotriesterase compare
BWI76_RS10435 +0.7 1.9 suppressor for copper-sensitivity C compare
BWI76_RS02575 +0.7 2.4 exoribonuclease R compare
BWI76_RS12675 +0.7 1.5 putative UV protection and mutation protein compare
BWI76_RS25485 +0.7 0.9 septum formation protein Maf compare
BWI76_RS22455 +0.7 3.0 TonB-dependent receptor compare
BWI76_RS16395 +0.7 2.3 glutathione S-transferase compare
BWI76_RS07430 +0.7 2.4 NUDIX hydrolase compare
BWI76_RS09105 +0.7 1.3 glutathione ABC transporter permease GsiC compare
BWI76_RS24220 +0.7 2.0 short chain dehydrogenase compare
BWI76_RS24810 +0.7 1.4 hypothetical protein compare
BWI76_RS11805 +0.7 1.1 hypothetical protein compare
BWI76_RS08280 +0.7 2.0 acyl-CoA esterase compare
BWI76_RS00075 +0.7 1.2 N-acetylmannosamine-6-phosphate 2-epimerase compare
BWI76_RS15205 +0.7 0.9 succinate-semialdehyde dehydrogenase compare
BWI76_RS08970 +0.7 1.4 glutamine ABC transporter permease GlnP compare
BWI76_RS10805 +0.7 1.3 hypothetical protein compare
BWI76_RS14020 +0.7 2.9 aspartate aminotransferase family protein compare
BWI76_RS21940 +0.7 2.1 SDR family oxidoreductase compare
BWI76_RS24720 +0.7 1.4 hypothetical protein compare
BWI76_RS10070 +0.7 1.2 BAX inhibitor protein compare
BWI76_RS18420 +0.7 2.3 DNA (cytosine-5-)-methyltransferase compare
BWI76_RS02220 +0.7 1.8 carbon-phosphorus lyase subunit PhnH compare
BWI76_RS14610 +0.7 1.3 putative hydrolase compare


Specific Phenotypes

For 5 genes in this experiment

For supernatant Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted in Klebsiella michiganensis M5al

For supernatant Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted across organisms