Experiment set10IT080 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x

200 most important genes:

  gene name fitness t score description  
BWI76_RS01210 -5.7 -4.4 tyrosine recombinase XerC compare
BWI76_RS21070 -4.2 -2.5 outer membrane protein assembly factor BamB compare
BWI76_RS23920 -3.5 -5.9 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS25335 -3.4 -3.2 stringent starvation protein A compare
BWI76_RS09660 -3.3 -3.2 DNA translocase FtsK compare
BWI76_RS27310 -3.3 -9.3 glycosyltransferase compare
BWI76_RS26085 -3.2 -2.3 3-dehydroquinate synthase compare
BWI76_RS09755 -3.1 -6.8 phosphoserine transaminase compare
BWI76_RS09635 -3.1 -2.0 amino acid ABC transporter ATP-binding protein compare
BWI76_RS06765 -3.1 -3.4 transcriptional regulator compare
BWI76_RS18920 -3.1 -3.2 ATP phosphoribosyltransferase compare
BWI76_RS23230 -2.9 -2.0 exodeoxyribonuclease V subunit beta compare
BWI76_RS27820 -2.9 -1.3 ilvB operon leader peptide IvbL compare
BWI76_RS18770 -2.8 -1.4 DNA gyrase inhibitor compare
BWI76_RS18925 -2.7 -4.4 histidinol dehydrogenase compare
BWI76_RS18950 -2.6 -4.3 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS09970 -2.6 -5.2 porin OmpA compare
BWI76_RS07065 -2.6 -7.7 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS18940 -2.5 -3.5 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS24400 -2.5 -6.0 outer membrane channel protein TolC compare
BWI76_RS15215 -2.5 -1.2 N-acetyltransferase compare
BWI76_RS04160 -2.5 -4.9 phosphoserine phosphatase compare
BWI76_RS25215 -2.4 -4.6 phospholipid-binding protein MlaC compare
BWI76_RS17720 -2.4 -1.2 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS21310 -2.4 -1.1 DNA repair protein RecO compare
BWI76_RS23240 -2.4 -3.9 exonuclease V subunit gamma compare
BWI76_RS27305 -2.3 -7.1 glycosyl transferase compare
BWI76_RS01330 -2.3 -2.6 twin-arginine translocase subunit TatC compare
BWI76_RS25225 -2.3 -6.8 ABC transporter permease compare
BWI76_RS26890 -2.3 -1.1 hypothetical protein compare
BWI76_RS04470 -2.3 -6.3 carbamoyl phosphate synthase large subunit compare
BWI76_RS26460 -2.2 -3.7 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS15660 -2.2 -1.3 hypothetical protein compare
BWI76_RS23480 -2.2 -8.9 EAL domain-containing protein compare
BWI76_RS27430 -2.2 -1.1 (p)ppGpp synthetase compare
BWI76_RS09760 -2.2 -3.2 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS17400 -2.1 -1.3 transporter compare
BWI76_RS15825 -2.1 -1.6 hypothetical protein compare
BWI76_RS00345 -2.1 -2.8 protein disulfide oxidoreductase DsbA compare
BWI76_RS18130 -2.0 -1.7 zinc ABC transporter substrate-binding protein compare
BWI76_RS16895 -2.0 -1.2 3-(3-hydroxy-phenyl)propionate transporter MhpT compare
BWI76_RS26395 -2.0 -3.4 cell division protein FtsE compare
BWI76_RS18930 -2.0 -4.1 histidinol-phosphate transaminase compare
BWI76_RS11255 -2.0 -1.5 putrescine/spermidine ABC transporter ATP-binding protein compare
BWI76_RS06770 -2.0 -9.1 Hha toxicity attenuator compare
BWI76_RS18135 -2.0 -4.6 zinc ABC transporter ATP-binding protein ZnuC compare
BWI76_RS25220 -2.0 -2.6 outer membrane lipid asymmetry maintenance protein MlaD compare
BWI76_RS17805 -1.9 -1.1 membrane protein compare
BWI76_RS23220 -1.9 -4.4 amino-acid N-acetyltransferase compare
BWI76_RS08640 -1.9 -1.6 multidrug efflux pump-associated protein, AcrZ family compare
BWI76_RS15835 -1.9 -2.0 hypothetical protein compare
BWI76_RS04510 -1.9 -1.7 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS00965 -1.9 -0.9 acetolactate synthase 2 small subunit compare
BWI76_RS02410 -1.9 -1.3 EF-P beta-lysylation protein EpmB compare
BWI76_RS18385 -1.9 -1.1 hypothetical protein compare
BWI76_RS05840 -1.9 -3.5 glutamate 5-kinase compare
BWI76_RS04250 -1.8 -6.0 homoserine kinase compare
BWI76_RS07070 -1.8 -2.7 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS00400 -1.8 -1.0 glutamine synthetase compare
BWI76_RS10500 -1.8 -2.0 flavoprotein monooxygenase compare
BWI76_RS25115 -1.8 -5.2 argininosuccinate synthase compare
BWI76_RS13560 -1.8 -1.1 amino acid ABC transporter substrate-binding subunit compare
BWI76_RS25230 -1.8 -3.1 phospholipid ABC transporter ATP-binding protein MlaF compare
BWI76_RS12280 -1.7 -3.4 hypothetical protein compare
BWI76_RS04645 -1.7 -3.6 3-dehydroquinase compare
BWI76_RS16755 -1.7 -2.5 acetoin reductase compare
BWI76_RS00025 -1.7 -0.8 hypothetical protein compare
BWI76_RS01325 -1.7 -2.3 twin-arginine translocase subunit TatB compare
BWI76_RS05810 -1.7 -1.0 hypothetical protein compare
BWI76_RS00375 -1.7 -2.4 hypothetical protein compare
BWI76_RS03010 -1.7 -7.2 ornithine carbamoyltransferase compare
BWI76_RS26570 -1.7 -2.5 anion permease compare
BWI76_RS00855 -1.7 -5.3 argininosuccinate lyase compare
BWI76_RS18935 -1.6 -4.9 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS04305 -1.6 -0.8 molecular chaperone DnaJ compare
BWI76_RS26670 -1.6 -6.7 two-component sensor histidine kinase compare
BWI76_RS04240 -1.6 -1.9 thr operon leader peptide compare
BWI76_RS04715 -1.6 -1.9 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS26390 -1.6 -3.3 cell division protein FtsX compare
BWI76_RS12825 -1.6 -1.7 hypothetical protein compare
BWI76_RS20355 -1.6 -2.9 colicin V production protein compare
BWI76_RS00750 -1.6 -3.5 ATP-dependent protease ATP-binding subunit HslU compare
BWI76_RS06775 -1.6 -6.7 multidrug efflux RND transporter permease subunit compare
BWI76_RS19850 -1.6 -2.4 tRNA-Pro compare
BWI76_RS05045 -1.5 -2.2 general secretion pathway protein GspM compare
BWI76_RS07730 -1.5 -1.0 iron-enterobactin transporter membrane protein compare
BWI76_RS01115 -1.5 -2.2 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS04465 -1.5 -3.2 carbamoyl-phosphate synthase small subunit compare
BWI76_RS05200 -1.5 -1.8 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS07640 -1.5 -1.1 short chain dehydrogenase compare
BWI76_RS07185 -1.5 -1.7 hypothetical protein compare
BWI76_RS26665 -1.5 -2.4 DNA-binding response regulator compare
BWI76_RS06080 -1.5 -2.6 taurine dioxygenase compare
BWI76_RS00845 -1.5 -4.7 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS20475 -1.5 -3.9 phospholipid-binding lipoprotein MlaA compare
BWI76_RS00355 -1.5 -2.0 DNA polymerase I compare
BWI76_RS18140 -1.5 -3.4 zinc ABC transporter permease compare
BWI76_RS16990 -1.5 -3.2 ABC transporter ATP-binding protein compare
BWI76_RS17985 -1.5 -3.0 hypothetical protein compare
BWI76_RS08605 -1.5 -1.7 phosphoglyceromutase compare
BWI76_RS20895 -1.4 -3.0 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS11430 -1.4 -0.8 lipoprotein compare
BWI76_RS00835 -1.4 -6.4 phosphoenolpyruvate carboxylase compare
BWI76_RS06530 -1.4 -4.4 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS19375 -1.4 -1.7 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
BWI76_RS23915 -1.4 -1.7 5-formyltetrahydrofolate cyclo-ligase compare
BWI76_RS01615 -1.4 -5.3 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS19010 -1.4 -1.6 polysaccharide pyruvyl transferase yvff compare
BWI76_RS06780 -1.4 -4.2 MexE family multidrug efflux RND transporter periplasmic adaptor subunit compare
BWI76_RS14650 -1.4 -2.9 helix-turn-helix transcriptional regulator compare
BWI76_RS22475 -1.4 -2.2 heme ABC transporter ATP-binding protein compare
BWI76_RS27505 -1.4 -3.3 septal ring assembly protein ZapB compare
BWI76_RS23265 -1.4 -2.2 hypothetical protein compare
BWI76_RS08525 -1.4 -2.7 colicin transporter compare
BWI76_RS26455 -1.4 -2.2 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS23930 -1.4 -3.4 transcriptional regulator ArgP compare
BWI76_RS00850 -1.3 -4.9 acetylglutamate kinase compare
BWI76_RS20785 -1.3 -0.8 ethanolamine utilization protein EutJ compare
BWI76_RS20490 -1.3 -2.5 hypothetical protein compare
BWI76_RS26620 -1.3 -0.8 Fe-S biogenesis protein NfuA compare
BWI76_RS14740 -1.3 -1.7 LysR family transcriptional regulator compare
BWI76_RS16490 -1.3 -1.3 glutaredoxin compare
BWI76_RS21460 -1.3 -1.1 translation inhibitor protein RaiA compare
BWI76_RS16000 -1.3 -1.1 multidrug transporter subunit MdtI compare
BWI76_RS07725 -1.3 -0.6 iron-enterobactin transporter permease compare
BWI76_RS16980 -1.3 -3.1 bifunctional cysteine desulfurase/selenocysteine lyase compare
BWI76_RS04255 -1.3 -4.1 threonine synthase compare
BWI76_RS09870 -1.3 -3.1 aromatic amino acid aminotransferase compare
BWI76_RS01790 -1.3 -6.9 lysine-sensitive aspartokinase 3 compare
BWI76_RS05015 -1.3 -1.5 transcriptional regulator compare
BWI76_RS15740 -1.2 -2.0 HNH endonuclease compare
BWI76_RS00805 -1.2 -2.8 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS01995 -1.2 -0.8 AraC family transcriptional regulator compare
BWI76_RS23120 -1.2 -1.4 propanediol dehydratase medium subunit compare
BWI76_RS23360 -1.2 -1.9 diaminopimelate decarboxylase compare
BWI76_RS01795 -1.2 -2.8 hypothetical protein compare
BWI76_RS20965 -1.2 -2.4 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS12195 -1.2 -2.9 hypothetical protein compare
BWI76_RS16935 -1.2 -0.8 shikimate dehydrogenase compare
BWI76_RS00975 -1.2 -6.9 dihydroxy-acid dehydratase compare
BWI76_RS11610 -1.2 -1.7 glutamate dehydrogenase compare
BWI76_RS01610 -1.2 -3.3 phosphoribosylamine--glycine ligase compare
BWI76_RS26075 -1.2 -2.7 DNA adenine methylase compare
BWI76_RS04670 -1.2 -4.4 3-isopropylmalate dehydratase large subunit compare
BWI76_RS20435 -1.2 -1.1 chorismate synthase compare
BWI76_RS26200 -1.2 -3.2 starch synthase compare
BWI76_RS05555 -1.2 -1.8 Crl family RNA polymerase assembly factor compare
BWI76_RS25480 -1.2 -2.2 ribonuclease E/G compare
BWI76_RS08500 -1.2 -2.0 cytochrome d ubiquinol oxidase subunit 2 compare
BWI76_RS18415 -1.2 -1.6 very short patch repair endonuclease compare
BWI76_RS05835 -1.2 -1.6 gamma-glutamyl-phosphate reductase compare
BWI76_RS13215 -1.1 -0.9 type I glyceraldehyde-3-phosphate dehydrogenase compare
BWI76_RS02995 -1.1 -4.4 aspartate carbamoyltransferase compare
BWI76_RS04665 -1.1 -8.6 3-isopropylmalate dehydratase small subunit compare
BWI76_RS21475 -1.1 -2.7 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS12895 -1.1 -2.7 hypothetical protein compare
BWI76_RS04675 -1.1 -3.6 3-isopropylmalate dehydrogenase compare
BWI76_RS02580 -1.1 -0.8 23S rRNA (guanosine(2251)-2'-O)-methyltransferase compare
BWI76_RS15110 -1.1 -7.2 putative excinuclease ABC subunit A compare
BWI76_RS25035 -1.1 -2.6 malonate transporter subunit MadM compare
BWI76_RS04685 -1.1 -4.3 putative leucine operon leader peptide compare
BWI76_RS27680 -1.1 -3.9 TetR family transcriptional regulator compare
BWI76_RS13420 -1.1 -1.4 ABC transporter permease compare
BWI76_RS00990 -1.1 -4.5 ketol-acid reductoisomerase compare
BWI76_RS04245 -1.1 -6.4 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS05125 -1.1 -5.9 ferrichrome porin FhuA compare
BWI76_RS16995 -1.1 -3.7 Fe-S cluster assembly protein SufB compare
BWI76_RS14615 -1.1 -0.9 hypothetical protein compare
BWI76_RS21165 -1.1 -1.0 Fe-S cluster assembly transcriptional regulator IscR compare
BWI76_RS23125 -1.1 -1.1 propanediol dehydratase small subunit compare
BWI76_RS25065 -1.1 -1.9 polyribonucleotide nucleotidyltransferase compare
BWI76_RS27905 -1.1 -2.6 heat-shock protein IbpB compare
BWI76_RS05410 -1.1 -3.3 2,5-didehydrogluconate reductase B compare
BWI76_RS09655 -1.1 -2.4 leucine-responsive regulatory protein compare
BWI76_RS21580 -1.1 -1.2 SsrA-binding protein compare
BWI76_RS18360 -1.1 -1.1 aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase family protein compare
BWI76_RS24600 -1.1 -1.8 dihydroxyacetone kinase compare
BWI76_RS04145 -1.1 -1.9 purine-nucleoside phosphorylase compare
BWI76_RS24595 -1.1 -2.8 dihydroxyacetone kinase subunit DhaK compare
BWI76_RS09190 -1.1 -3.1 hypothetical protein compare
BWI76_RS13775 -1.0 -1.6 putative FMN-dependent luciferase-like monooxygenase compare
BWI76_RS11335 -1.0 -0.8 tautomerase compare
BWI76_RS09335 -1.0 -0.8 baseplate assembly protein W compare
BWI76_RS21265 -1.0 -5.6 phosphoribosylformylglycinamidine synthase compare
BWI76_RS12200 -1.0 -1.8 hypothetical protein compare
BWI76_RS06560 -1.0 -1.4 7-cyano-7-deazaguanine synthase QueC compare
BWI76_RS11820 -1.0 -0.8 short-chain dehydrogenase/reductase SDR compare
BWI76_RS05175 -1.0 -7.0 dGTPase compare
BWI76_RS18715 -1.0 -4.2 hypothetical protein compare
BWI76_RS20225 -1.0 -1.6 hypothetical protein compare
BWI76_RS20710 -1.0 -2.9 dyp-type peroxidase family protein compare
BWI76_RS10700 -1.0 -1.9 XRE family transcriptional regulator compare
BWI76_RS15810 -1.0 -3.3 hypothetical protein compare
BWI76_RS14320 -1.0 -1.3 hypothetical protein compare
BWI76_RS02745 -1.0 -0.7 hypothetical protein compare
BWI76_RS13755 -1.0 -1.2 hypothetical protein compare
BWI76_RS23365 -1.0 -3.4 LysR family transcriptional regulator compare
BWI76_RS15630 -1.0 -1.9 hypothetical protein compare
BWI76_RS21000 -1.0 -2.6 exopolyphosphatase compare
BWI76_RS23485 -1.0 -5.2 hypothetical protein compare


Specific Phenotypes

For 5 genes in this experiment

For supernatant Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted in Klebsiella michiganensis M5al

For supernatant Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted across organisms