Experiment set10IT078 for Klebsiella michiganensis M5al

Compare to:

Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x

200 most important genes:

  gene name fitness t score description  
BWI76_RS26085 -5.6 -3.8 3-dehydroquinate synthase compare
BWI76_RS09755 -5.3 -8.9 phosphoserine transaminase compare
BWI76_RS09660 -5.1 -3.5 DNA translocase FtsK compare
BWI76_RS23360 -5.1 -4.2 diaminopimelate decarboxylase compare
BWI76_RS18930 -5.0 -6.1 histidinol-phosphate transaminase compare
BWI76_RS01210 -4.9 -5.8 tyrosine recombinase XerC compare
BWI76_RS18925 -4.9 -7.5 histidinol dehydrogenase compare
BWI76_RS04470 -4.8 -10.7 carbamoyl phosphate synthase large subunit compare
BWI76_RS04160 -4.7 -6.6 phosphoserine phosphatase compare
BWI76_RS23920 -4.7 -4.9 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS17720 -4.6 -1.9 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS18950 -4.6 -4.6 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS23240 -4.3 -5.8 exonuclease V subunit gamma compare
BWI76_RS04465 -4.1 -6.2 carbamoyl-phosphate synthase small subunit compare
BWI76_RS01350 -4.1 -1.7 NAD(P)H-flavin reductase compare
BWI76_RS08385 -4.0 -5.4 citrate (Si)-synthase compare
BWI76_RS01615 -4.0 -10.2 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS23230 -4.0 -3.9 exodeoxyribonuclease V subunit beta compare
BWI76_RS25600 -3.7 -1.5 tRNA-Thr compare
BWI76_RS04250 -3.7 -6.9 homoserine kinase compare
BWI76_RS02530 -3.6 -3.5 tRNA dimethylallyltransferase compare
BWI76_RS18935 -3.6 -4.9 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS20350 -3.6 -8.4 amidophosphoribosyltransferase compare
BWI76_RS18940 -3.6 -5.6 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS04255 -3.6 -11.8 threonine synthase compare
BWI76_RS25115 -3.5 -9.3 argininosuccinate synthase compare
BWI76_RS00385 -3.4 -9.5 nitrogen assimilation regulatory protein compare
BWI76_RS01610 -3.4 -8.9 phosphoribosylamine--glycine ligase compare
BWI76_RS23365 -3.3 -8.8 LysR family transcriptional regulator compare
BWI76_RS25335 -3.3 -3.9 stringent starvation protein A compare
BWI76_RS20895 -3.2 -4.8 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS20355 -3.2 -6.6 colicin V production protein compare
BWI76_RS21265 -3.1 -11.8 phosphoribosylformylglycinamidine synthase compare
BWI76_RS17975 -3.1 -6.2 tail-specific protease compare
BWI76_RS04645 -3.1 -6.7 3-dehydroquinase compare
BWI76_RS00345 -3.0 -4.0 protein disulfide oxidoreductase DsbA compare
BWI76_RS07065 -3.0 -6.6 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS22755 -2.9 -6.5 phosphoadenosine phosphosulfate reductase compare
BWI76_RS00855 -2.9 -7.7 argininosuccinate lyase compare
BWI76_RS09970 -2.9 -4.1 porin OmpA compare
BWI76_RS05200 -2.8 -3.7 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS25315 -2.8 -9.2 glutamate synthase large subunit compare
BWI76_RS05260 -2.8 -2.2 chaperone compare
BWI76_RS15825 -2.8 -3.3 hypothetical protein compare
BWI76_RS00390 -2.7 -5.2 two-component system sensor histidine kinase NtrB compare
BWI76_RS25320 -2.7 -9.5 glutamate synthase compare
BWI76_RS00805 -2.7 -5.4 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS15115 -2.7 -9.6 MFS transporter compare
BWI76_RS09760 -2.6 -8.1 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS09645 -2.6 -2.5 thioredoxin-disulfide reductase compare
BWI76_RS21580 -2.6 -1.8 SsrA-binding protein compare
BWI76_RS16965 -2.6 -3.4 murein lipoprotein compare
BWI76_RS02995 -2.5 -7.5 aspartate carbamoyltransferase compare
BWI76_RS00845 -2.5 -10.5 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS02725 -2.5 -1.8 HxlR family transcriptional regulator compare
BWI76_RS23220 -2.5 -6.9 amino-acid N-acetyltransferase compare
BWI76_RS00400 -2.5 -2.3 glutamine synthetase compare
BWI76_RS21475 -2.4 -6.7 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS05840 -2.4 -5.8 glutamate 5-kinase compare
BWI76_RS20965 -2.4 -3.6 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS07070 -2.4 -6.2 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS05835 -2.4 -2.8 gamma-glutamyl-phosphate reductase compare
BWI76_RS00975 -2.4 -11.0 dihydroxy-acid dehydratase compare
BWI76_RS03010 -2.3 -8.0 ornithine carbamoyltransferase compare
BWI76_RS22690 -2.3 -2.7 adenylyl-sulfate kinase compare
BWI76_RS14935 -2.3 -2.0 NIPSNAP family containing protein compare
BWI76_RS00850 -2.3 -9.6 acetylglutamate kinase compare
BWI76_RS26570 -2.2 -2.5 anion permease compare
BWI76_RS11860 -2.2 -9.8 anthranilate synthase component I compare
BWI76_RS13820 -2.1 -2.2 hypothetical protein compare
BWI76_RS20435 -2.1 -2.3 chorismate synthase compare
BWI76_RS00835 -2.1 -9.3 phosphoenolpyruvate carboxylase compare
BWI76_RS10990 -2.0 -3.0 dihydroorotase compare
BWI76_RS05015 -2.0 -2.9 transcriptional regulator compare
BWI76_RS04245 -2.0 -8.3 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS24945 -2.0 -1.6 glutamine amidotransferase compare
BWI76_RS26390 -1.9 -4.4 cell division protein FtsX compare
BWI76_RS26055 -1.9 -6.2 siroheme synthase compare
BWI76_RS13250 -1.9 -1.7 cytochrome b561 compare
BWI76_RS04240 -1.9 -3.4 thr operon leader peptide compare
BWI76_RS20180 -1.8 -5.2 NADH-quinone oxidoreductase subunit C/D compare
BWI76_RS27875 -1.8 -2.0 membrane protein compare
BWI76_RS17980 -1.8 -3.2 RNA chaperone ProQ compare
BWI76_RS08645 -1.8 -3.5 molybdate ABC transporter substrate-binding protein compare
BWI76_RS26620 -1.8 -1.4 Fe-S biogenesis protein NfuA compare
BWI76_RS00990 -1.8 -7.2 ketol-acid reductoisomerase compare
BWI76_RS23265 -1.7 -3.7 hypothetical protein compare
BWI76_RS11855 -1.7 -6.0 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS01200 -1.7 -2.0 diaminopimelate epimerase compare
BWI76_RS04530 -1.7 -2.7 peptidylprolyl isomerase SurA compare
BWI76_RS16485 -1.7 -2.3 ribonuclease T compare
BWI76_RS00965 -1.7 -1.3 acetolactate synthase 2 small subunit compare
BWI76_RS20970 -1.6 -1.7 phosphoribosylglycinamide formyltransferase compare
BWI76_RS25645 -1.6 -7.4 shikimate dehydrogenase compare
BWI76_RS18955 -1.6 -5.2 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS09910 -1.6 -10.6 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS05075 -1.6 -1.3 type II secretion system protein GspG compare
BWI76_RS08525 -1.6 -2.9 colicin transporter compare
BWI76_RS11965 -1.6 -3.6 orotidine-5'-phosphate decarboxylase compare
BWI76_RS08825 -1.6 -4.1 cyclic pyranopterin monophosphate synthase MoaC compare
BWI76_RS22760 -1.5 -4.0 sulfite reductase subunit beta compare
BWI76_RS15830 -1.5 -3.0 hypothetical protein compare
BWI76_RS26395 -1.5 -1.7 cell division protein FtsE compare
BWI76_RS20155 -1.5 -1.5 NADH-quinone oxidoreductase subunit I compare
BWI76_RS27385 -1.5 -3.7 orotate phosphoribosyltransferase compare
BWI76_RS01220 -1.5 -5.2 DNA-dependent helicase II compare
BWI76_RS15835 -1.5 -0.9 hypothetical protein compare
BWI76_RS03040 -1.5 -2.4 leucyl aminopeptidase compare
BWI76_RS20160 -1.5 -3.2 NADH-quinone oxidoreductase subunit H compare
BWI76_RS11840 -1.5 -2.4 tryptophan synthase subunit alpha compare
BWI76_RS21140 -1.5 -2.0 molecular chaperone HscA compare
BWI76_RS03160 -1.5 -8.3 hypothetical protein compare
BWI76_RS22765 -1.5 -6.5 sulfite reductase subunit alpha compare
BWI76_RS24400 -1.5 -5.4 outer membrane channel protein TolC compare
BWI76_RS09190 -1.4 -4.4 hypothetical protein compare
BWI76_RS08835 -1.4 -5.5 molybdopterin guanine dinucleotide biosynthesis protein MoaE compare
BWI76_RS20650 -1.4 -2.0 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS11850 -1.4 -6.1 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS21350 -1.4 -2.0 anti-RNA polymerase sigma factor SigE compare
BWI76_RS09080 -1.4 -2.8 molybdopterin-synthase adenylyltransferase MoeB compare
BWI76_RS25960 -1.3 -2.4 NUDIX hydrolase compare
BWI76_RS20490 -1.3 -3.3 hypothetical protein compare
BWI76_RS08520 -1.3 -2.1 colicin transporter TolQ compare
BWI76_RS20130 -1.3 -4.9 NADH-quinone oxidoreductase subunit N compare
BWI76_RS26775 -1.3 -3.5 endo-1,4-D-glucanase compare
BWI76_RS15635 -1.3 -3.9 hypothetical protein compare
BWI76_RS11525 -1.3 -2.2 HNH endonuclease compare
BWI76_RS18920 -1.3 -3.5 ATP phosphoribosyltransferase compare
BWI76_RS13215 -1.3 -1.6 type I glyceraldehyde-3-phosphate dehydrogenase compare
BWI76_RS00260 -1.3 -6.4 ATPase RavA compare
BWI76_RS04670 -1.3 -6.9 3-isopropylmalate dehydratase large subunit compare
BWI76_RS09030 -1.3 -5.4 transpeptidase compare
BWI76_RS06530 -1.3 -3.8 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS20140 -1.2 -3.4 NADH-quinone oxidoreductase subunit L compare
BWI76_RS12375 -1.2 -4.0 DNA-invertase hin compare
BWI76_RS21565 -1.2 -1.3 outer membrane protein assembly factor BamE compare
BWI76_RS22485 -1.2 -4.5 hypothetical protein compare
BWI76_RS00330 -1.2 -5.1 molybdenum cofactor guanylyltransferase compare
BWI76_RS00980 -1.2 -5.8 PLP-dependent threonine dehydratase compare
BWI76_RS21795 -1.2 -4.2 EAL domain-containing protein compare
BWI76_RS24260 -1.2 -2.5 hypothetical protein compare
BWI76_RS08530 -1.2 -2.0 protein TolA compare
BWI76_RS27430 -1.2 -1.4 (p)ppGpp synthetase compare
BWI76_RS02180 -1.2 -1.3 hypothetical protein compare
BWI76_RS24285 -1.2 -5.2 cystathionine beta-lyase compare
BWI76_RS15620 -1.2 -2.0 hypothetical protein compare
BWI76_RS00355 -1.2 -3.3 DNA polymerase I compare
BWI76_RS12280 -1.2 -4.0 hypothetical protein compare
BWI76_RS06485 -1.2 -2.6 cytochrome o ubiquinol oxidase subunit III compare
BWI76_RS27820 -1.2 -1.8 ilvB operon leader peptide IvbL compare
BWI76_RS26075 -1.2 -3.5 DNA adenine methylase compare
BWI76_RS12305 -1.2 -4.1 hypothetical protein compare
BWI76_RS12090 -1.2 -0.9 HNH endonuclease compare
BWI76_RS00255 -1.2 -5.9 hypothetical protein compare
BWI76_RS19025 -1.2 -6.9 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) compare
BWI76_RS00760 -1.1 -2.4 cell division protein FtsN compare
BWI76_RS19000 -1.1 -5.0 acyltransferase compare
BWI76_RS21370 -1.1 -2.0 ATP-dependent RNA helicase SrmB compare
BWI76_RS14390 -1.1 -1.9 hypothetical protein compare
BWI76_RS19035 -1.1 -3.4 dTDP-rhamnosyl transferase compare
BWI76_RS08655 -1.1 -3.5 molybdenum ABC transporter ATP-binding protein compare
BWI76_RS03155 -1.1 -7.4 hypothetical protein compare
BWI76_RS20565 -1.1 -2.3 hypothetical protein compare
BWI76_RS20190 -1.1 -4.8 NADH-quinone oxidoreductase subunit A compare
BWI76_RS11845 -1.1 -2.4 tryptophan synthase subunit beta compare
BWI76_RS12045 -1.1 -2.3 hypothetical protein compare
BWI76_RS17360 -1.1 -6.2 nitrate reductase compare
BWI76_RS15840 -1.1 -2.8 prophage protein compare
BWI76_RS01325 -1.1 -1.8 twin-arginine translocase subunit TatB compare
BWI76_RS06525 -1.1 -2.5 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS06495 -1.1 -5.0 cytochrome ubiquinol oxidase subunit II compare
BWI76_RS21480 -1.0 -5.0 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BWI76_RS27440 -1.0 -2.5 DNA helicase RecG compare
BWI76_RS08980 -1.0 -1.2 DNA starvation/stationary phase protection protein compare
BWI76_RS00715 -1.0 -1.5 two-component sensor histidine kinase compare
BWI76_RS04955 -1.0 -1.9 hypoxanthine phosphoribosyltransferase compare
BWI76_RS11770 -1.0 -2.1 hypothetical protein compare
BWI76_RS19615 -1.0 -2.8 vancomycin high temperature exclusion protein compare
BWI76_RS20135 -1.0 -2.6 NADH-quinone oxidoreductase subunit M compare
BWI76_RS20795 -1.0 -1.2 ethanolamine catabolic microcompartment shell protein EutN compare
BWI76_RS19215 -1.0 -1.7 proline-specific peptidase compare
BWI76_RS15740 -1.0 -2.4 HNH endonuclease compare
BWI76_RS26200 -1.0 -3.5 starch synthase compare
BWI76_RS14625 -1.0 -1.2 protein TolA compare
BWI76_RS17290 -1.0 -2.2 formyltetrahydrofolate deformylase compare
BWI76_RS17365 -1.0 -5.8 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) compare
BWI76_RS07790 -1.0 -2.0 plasmid stabilization protein compare
BWI76_RS04675 -1.0 -2.6 3-isopropylmalate dehydrogenase compare
BWI76_RS21685 -1.0 -1.4 hypothetical protein compare
BWI76_RS09085 -1.0 -5.1 molybdopterin molybdenumtransferase MoeA compare
BWI76_RS06830 -1.0 -2.8 recombination protein RecR compare
BWI76_RS21130 -1.0 -1.6 Fe-S assembly protein IscX compare
BWI76_RS27305 -1.0 -2.8 glycosyl transferase compare
BWI76_RS12295 -0.9 -3.0 hypothetical protein compare
BWI76_RS15850 -0.9 -1.4 DUF1317 domain-containing protein compare
BWI76_RS14460 -0.9 -1.8 MurR/RpiR family transcriptional regulator compare
BWI76_RS22645 -0.9 -2.6 RNA polymerase sigma factor RpoS compare
BWI76_RS11060 -0.9 -1.7 septum formation inhibitor Maf compare
BWI76_RS03665 -0.9 -1.5 ABC transporter ATP-binding protein compare
BWI76_RS16075 -0.9 -1.4 oxidoreductase compare


Specific Phenotypes

For 5 genes in this experiment

For supernatant Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted in Klebsiella michiganensis M5al

For supernatant Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted across organisms