Experiment set10IT069 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 0.25x

200 most important genes:

  gene name fitness t score description  
BWI76_RS20350 -8.4 -5.8 amidophosphoribosyltransferase compare
BWI76_RS20355 -8.2 -5.7 colicin V production protein compare
BWI76_RS20965 -8.0 -5.5 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS04160 -7.7 -7.5 phosphoserine phosphatase compare
BWI76_RS18950 -7.4 -5.1 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS21265 -7.0 -11.7 phosphoribosylformylglycinamidine synthase compare
BWI76_RS23920 -6.7 -4.6 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS18930 -6.6 -4.2 histidinol-phosphate transaminase compare
BWI76_RS00805 -6.5 -6.4 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS11965 -6.4 -5.1 orotidine-5'-phosphate decarboxylase compare
BWI76_RS04645 -6.3 -4.4 3-dehydroquinase compare
BWI76_RS23365 -6.2 -6.0 LysR family transcriptional regulator compare
BWI76_RS09755 -6.2 -7.3 phosphoserine transaminase compare
BWI76_RS01615 -6.1 -7.3 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS00990 -6.1 -8.3 ketol-acid reductoisomerase compare
BWI76_RS21475 -6.0 -7.1 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS02995 -5.9 -8.9 aspartate carbamoyltransferase compare
BWI76_RS04470 -5.8 -8.8 carbamoyl phosphate synthase large subunit compare
BWI76_RS05835 -5.8 -4.0 gamma-glutamyl-phosphate reductase compare
BWI76_RS00835 -5.8 -13.9 phosphoenolpyruvate carboxylase compare
BWI76_RS26085 -5.6 -3.8 3-dehydroquinate synthase compare
BWI76_RS18955 -5.5 -6.6 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS18935 -5.5 -6.9 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS07065 -5.5 -9.8 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS20895 -5.4 -6.4 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS07070 -5.4 -5.2 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS04465 -5.3 -5.1 carbamoyl-phosphate synthase small subunit compare
BWI76_RS01610 -5.3 -6.7 phosphoribosylamine--glycine ligase compare
BWI76_RS23240 -5.0 -3.4 exonuclease V subunit gamma compare
BWI76_RS09660 -5.0 -3.4 DNA translocase FtsK compare
BWI76_RS09910 -4.8 -21.0 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS00855 -4.8 -10.2 argininosuccinate lyase compare
BWI76_RS04245 -4.6 -15.9 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS04250 -4.6 -7.3 homoserine kinase compare
BWI76_RS23220 -4.6 -10.2 amino-acid N-acetyltransferase compare
BWI76_RS27385 -4.6 -6.9 orotate phosphoribosyltransferase compare
BWI76_RS04255 -4.4 -11.0 threonine synthase compare
BWI76_RS18925 -4.3 -8.3 histidinol dehydrogenase compare
BWI76_RS22765 -4.3 -13.6 sulfite reductase subunit alpha compare
BWI76_RS18940 -4.3 -3.9 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS00850 -4.2 -10.0 acetylglutamate kinase compare
BWI76_RS24285 -4.2 -10.1 cystathionine beta-lyase compare
BWI76_RS00845 -4.0 -11.2 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS00965 -4.0 -1.8 acetolactate synthase 2 small subunit compare
BWI76_RS05840 -4.0 -7.1 glutamate 5-kinase compare
BWI76_RS08385 -4.0 -5.4 citrate (Si)-synthase compare
BWI76_RS01655 -3.9 -10.5 homoserine O-succinyltransferase compare
BWI76_RS22755 -3.9 -7.1 phosphoadenosine phosphosulfate reductase compare
BWI76_RS00980 -3.9 -12.0 PLP-dependent threonine dehydratase compare
BWI76_RS00985 -3.8 -7.8 transcriptional regulator IlvY compare
BWI76_RS22690 -3.8 -3.6 adenylyl-sulfate kinase compare
BWI76_RS04670 -3.7 -10.2 3-isopropylmalate dehydratase large subunit compare
BWI76_RS09760 -3.6 -2.9 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS22760 -3.6 -8.9 sulfite reductase subunit beta compare
BWI76_RS23360 -3.5 -4.5 diaminopimelate decarboxylase compare
BWI76_RS04665 -3.5 -18.8 3-isopropylmalate dehydratase small subunit compare
BWI76_RS02735 -3.5 -6.6 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS25645 -3.5 -7.6 shikimate dehydrogenase compare
BWI76_RS25115 -3.4 -7.8 argininosuccinate synthase compare
BWI76_RS00975 -3.4 -8.2 dihydroxy-acid dehydratase compare
BWI76_RS04675 -3.4 -7.1 3-isopropylmalate dehydrogenase compare
BWI76_RS26570 -3.4 -3.9 anion permease compare
BWI76_RS20435 -3.3 -1.9 chorismate synthase compare
BWI76_RS04240 -3.3 -2.7 thr operon leader peptide compare
BWI76_RS27390 -3.3 -5.7 ribonuclease PH compare
BWI76_RS10990 -3.3 -3.4 dihydroorotase compare
BWI76_RS11840 -3.2 -4.8 tryptophan synthase subunit alpha compare
BWI76_RS00785 -3.1 -6.0 cystathionine gamma-synthase compare
BWI76_RS03010 -3.1 -7.5 ornithine carbamoyltransferase compare
BWI76_RS01800 -3.1 -5.0 glucose-6-phosphate isomerase compare
BWI76_RS23230 -3.0 -5.6 exodeoxyribonuclease V subunit beta compare
BWI76_RS04685 -2.9 -9.0 putative leucine operon leader peptide compare
BWI76_RS26000 -2.9 -9.0 aspartate aminotransferase family protein compare
BWI76_RS21480 -2.7 -7.0 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BWI76_RS09645 -2.7 -2.6 thioredoxin-disulfide reductase compare
BWI76_RS18920 -2.7 -5.0 ATP phosphoribosyltransferase compare
BWI76_RS11850 -2.6 -11.6 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS01210 -2.5 -4.9 tyrosine recombinase XerC compare
BWI76_RS21465 -2.5 -4.3 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS04680 -2.4 -7.5 2-isopropylmalate synthase compare
BWI76_RS11860 -2.4 -6.3 anthranilate synthase component I compare
BWI76_RS02530 -2.3 -3.0 tRNA dimethylallyltransferase compare
BWI76_RS11845 -2.3 -2.6 tryptophan synthase subunit beta compare
BWI76_RS05200 -2.2 -2.9 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS11855 -2.2 -7.4 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS01200 -2.2 -2.4 diaminopimelate epimerase compare
BWI76_RS15660 -2.2 -2.1 hypothetical protein compare
BWI76_RS15115 -2.1 -8.2 MFS transporter compare
BWI76_RS26055 -2.1 -8.8 siroheme synthase compare
BWI76_RS08535 -2.0 -2.1 translocation protein TolB compare
BWI76_RS21140 -2.0 -2.9 molecular chaperone HscA compare
BWI76_RS20650 -1.9 -1.8 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS27430 -1.8 -1.8 (p)ppGpp synthetase compare
BWI76_RS15835 -1.8 -1.7 hypothetical protein compare
BWI76_RS16315 -1.8 -1.9 SirA-like protein compare
BWI76_RS09970 -1.7 -5.0 porin OmpA compare
BWI76_RS00400 -1.7 -1.5 glutamine synthetase compare
BWI76_RS05450 -1.7 -2.0 ribonuclease HI compare
BWI76_RS20440 -1.7 -1.4 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS25335 -1.7 -3.6 stringent starvation protein A compare
BWI76_RS09655 -1.6 -4.6 leucine-responsive regulatory protein compare
BWI76_RS25065 -1.6 -3.4 polyribonucleotide nucleotidyltransferase compare
BWI76_RS00960 -1.5 -5.1 acetolactate synthase 2 catalytic subunit compare
BWI76_RS00180 -1.5 -1.4 F0F1 ATP synthase subunit epsilon compare
BWI76_RS26405 -1.5 -1.7 16S rRNA (guanine(966)-N(2))-methyltransferase compare
BWI76_RS09190 -1.5 -4.0 hypothetical protein compare
BWI76_RS02410 -1.5 -2.2 EF-P beta-lysylation protein EpmB compare
BWI76_RS20970 -1.4 -1.6 phosphoribosylglycinamide formyltransferase compare
BWI76_RS00025 -1.4 -1.2 hypothetical protein compare
BWI76_RS04510 -1.3 -1.5 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS01275 -1.3 -6.4 LysR family transcriptional regulator compare
BWI76_RS01350 -1.3 -1.2 NAD(P)H-flavin reductase compare
BWI76_RS20640 -1.3 -4.8 cysteine synthase A compare
BWI76_RS22695 -1.2 -4.8 sulfate adenylyltransferase compare
BWI76_RS06535 -1.2 -3.3 endopeptidase La compare
BWI76_RS21675 -1.2 -1.4 hypothetical protein compare
BWI76_RS00385 -1.2 -6.2 nitrogen assimilation regulatory protein compare
BWI76_RS00355 -1.2 -3.1 DNA polymerase I compare
BWI76_RS01630 -1.2 -1.3 16S ribosomal RNA compare
BWI76_RS15110 -1.2 -8.4 putative excinuclease ABC subunit A compare
BWI76_RS05260 -1.2 -1.6 chaperone compare
BWI76_RS12665 -1.2 -2.3 hypothetical protein compare
BWI76_RS16000 -1.2 -1.5 multidrug transporter subunit MdtI compare
BWI76_RS18165 -1.1 -1.2 NUDIX pyrophosphatase compare
BWI76_RS15630 -1.1 -3.8 hypothetical protein compare
BWI76_RS06325 -1.1 -1.9 hypothetical protein compare
BWI76_RS19035 -1.1 -5.0 dTDP-rhamnosyl transferase compare
BWI76_RS19935 -1.0 -1.8 hypothetical protein compare
BWI76_RS12235 -1.0 -1.7 hypothetical protein compare
BWI76_RS19375 -1.0 -1.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
BWI76_RS17200 -1.0 -1.5 hypothetical protein compare
BWI76_RS00390 -1.0 -3.1 two-component system sensor histidine kinase NtrB compare
BWI76_RS09870 -1.0 -4.7 aromatic amino acid aminotransferase compare
BWI76_RS06490 -1.0 -2.9 cytochrome ubiquinol oxidase subunit I compare
BWI76_RS20900 -1.0 -1.3 outer membrane protein assembly factor BamC compare
BWI76_RS22090 -1.0 -1.2 transcriptional regulator compare
BWI76_RS08525 -1.0 -2.4 colicin transporter compare
BWI76_RS04530 -1.0 -1.0 peptidylprolyl isomerase SurA compare
BWI76_RS20050 -1.0 -1.4 hypothetical protein compare
BWI76_RS13560 -1.0 -1.1 amino acid ABC transporter substrate-binding subunit compare
BWI76_RS12545 -1.0 -2.9 hypothetical protein compare
BWI76_RS21070 -1.0 -2.1 outer membrane protein assembly factor BamB compare
BWI76_RS21505 -1.0 -1.1 hypothetical protein compare
BWI76_RS22805 -0.9 -6.1 GTP diphosphokinase compare
BWI76_RS12375 -0.9 -2.1 DNA-invertase hin compare
BWI76_RS19890 -0.9 -1.8 alpha-ketoglutarate-dependent dioxygenase AlkB compare
BWI76_RS19010 -0.9 -2.6 polysaccharide pyruvyl transferase yvff compare
BWI76_RS22700 -0.9 -3.1 sulfate adenylyltransferase subunit 2 compare
BWI76_RS25315 -0.9 -5.2 glutamate synthase large subunit compare
BWI76_RS08665 -0.9 -4.6 6-phosphogluconolactonase compare
BWI76_RS01220 -0.9 -4.6 DNA-dependent helicase II compare
BWI76_RS06800 -0.9 -1.0 DUF2496 domain-containing protein compare
BWI76_RS13820 -0.9 -2.1 hypothetical protein compare
BWI76_RS27425 -0.9 -1.2 DNA-directed RNA polymerase subunit omega compare
BWI76_RS25425 -0.9 -1.5 arginine repressor compare
BWI76_RS25960 -0.9 -3.1 NUDIX hydrolase compare
BWI76_RS23455 -0.9 -2.4 Na(+)-translocating NADH-quinone reductase subunit E compare
BWI76_RS20145 -0.9 -1.4 NADH-quinone oxidoreductase subunit K compare
BWI76_RS25320 -0.9 -4.1 glutamate synthase compare
BWI76_RS25925 -0.9 -2.3 hypothetical protein compare
BWI76_RS17565 -0.9 -1.6 hypothetical protein compare
BWI76_RS04815 -0.9 -2.0 cell division protein ZapD compare
BWI76_RS21395 -0.9 -1.3 DTW domain-containing protein compare
BWI76_RS15725 -0.9 -2.9 hypothetical protein compare
BWI76_RS15680 -0.9 -3.2 hypothetical protein compare
BWI76_RS15235 -0.8 -2.3 hypothetical protein compare
BWI76_RS15640 -0.8 -5.8 hypothetical protein compare
BWI76_RS14915 -0.8 -1.8 hypothetical protein compare
BWI76_RS25060 -0.8 -2.1 lipoprotein NlpI compare
BWI76_RS21345 -0.8 -1.7 sigma-E factor regulatory protein RseB compare
BWI76_RS17390 -0.8 -1.9 DsrE family protein compare
BWI76_RS15950 -0.8 -1.0 dethiobiotin synthase compare
BWI76_RS18455 -0.8 -1.3 tRNA-Ser compare
BWI76_RS08530 -0.8 -2.1 protein TolA compare
BWI76_RS23480 -0.8 -5.0 EAL domain-containing protein compare
BWI76_RS11130 -0.8 -3.5 PTS glucose transporter subunit IIBC compare
BWI76_RS13980 -0.8 -1.4 hypothetical protein compare
BWI76_RS26095 -0.8 -0.8 shikimate kinase compare
BWI76_RS04100 -0.8 -2.6 peptide chain release factor 3 compare
BWI76_RS21660 -0.8 -1.3 antirestriction protein compare
BWI76_RS12280 -0.8 -2.5 hypothetical protein compare
BWI76_RS11125 -0.8 -1.2 metal-dependent hydrolase compare
BWI76_RS24945 -0.8 -0.9 glutamine amidotransferase compare
BWI76_RS15825 -0.8 -2.3 hypothetical protein compare
BWI76_RS14305 -0.8 -3.0 metallophosphoesterase compare
BWI76_RS19870 -0.8 -1.2 malate:quinone oxidoreductase compare
BWI76_RS21685 -0.8 -1.2 hypothetical protein compare
BWI76_RS17180 -0.8 -2.1 hypothetical protein compare
BWI76_RS06830 -0.8 -3.2 recombination protein RecR compare
BWI76_RS02255 -0.8 -2.5 chaperone-modulator protein CbpM compare
BWI76_RS07780 -0.7 -1.0 hypothetical protein compare
BWI76_RS15635 -0.7 -2.6 hypothetical protein compare
BWI76_RS04305 -0.7 -0.7 molecular chaperone DnaJ compare
BWI76_RS15605 -0.7 -1.9 hypothetical protein compare
BWI76_RS20150 -0.7 -1.4 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS25160 -0.7 -1.3 transcription elongation factor GreA compare
BWI76_RS19685 -0.7 -2.9 lysine transporter compare
BWI76_RS15645 -0.7 -3.7 gp6 compare
BWI76_RS27820 -0.7 -0.9 ilvB operon leader peptide IvbL compare
BWI76_RS24120 -0.7 -2.1 YggW family oxidoreductase compare


Specific Phenotypes

For 1 genes in this experiment

For exudates Brachypodium distachyon 27-day exudates in Klebsiella michiganensis M5al

For exudates Brachypodium distachyon 27-day exudates across organisms