Experiment set10IT068 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_glucose with Brachypodium distachyon 13-day exudates 0.5x

200 most important genes:

  gene name fitness t score description  
BWI76_RS21265 -6.8 -11.4 phosphoribosylformylglycinamidine synthase compare
BWI76_RS20355 -6.4 -4.5 colicin V production protein compare
BWI76_RS20965 -6.1 -5.6 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS26085 -5.7 -3.9 3-dehydroquinate synthase compare
BWI76_RS18950 -5.6 -4.2 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS21475 -5.5 -6.4 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS04160 -5.4 -6.0 phosphoserine phosphatase compare
BWI76_RS01615 -5.2 -10.6 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS04645 -5.2 -7.0 3-dehydroquinase compare
BWI76_RS23365 -5.1 -6.9 LysR family transcriptional regulator compare
BWI76_RS20350 -5.1 -6.1 amidophosphoribosyltransferase compare
BWI76_RS18930 -5.0 -6.0 histidinol-phosphate transaminase compare
BWI76_RS04470 -5.0 -9.6 carbamoyl phosphate synthase large subunit compare
BWI76_RS07070 -5.0 -4.8 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS20895 -4.7 -5.7 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS23920 -4.6 -4.7 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS00855 -4.5 -9.7 argininosuccinate lyase compare
BWI76_RS27390 -4.5 -4.6 ribonuclease PH compare
BWI76_RS04245 -4.5 -15.0 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS23240 -4.5 -4.4 exonuclease V subunit gamma compare
BWI76_RS00990 -4.5 -10.0 ketol-acid reductoisomerase compare
BWI76_RS00835 -4.5 -12.9 phosphoenolpyruvate carboxylase compare
BWI76_RS04255 -4.4 -10.7 threonine synthase compare
BWI76_RS05835 -4.4 -4.2 gamma-glutamyl-phosphate reductase compare
BWI76_RS01610 -4.4 -9.2 phosphoribosylamine--glycine ligase compare
BWI76_RS18940 -4.4 -6.0 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS02995 -4.4 -9.5 aspartate carbamoyltransferase compare
BWI76_RS18935 -4.3 -8.1 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS25645 -4.2 -8.6 shikimate dehydrogenase compare
BWI76_RS09760 -4.2 -3.7 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS09910 -4.2 -16.6 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS00965 -4.1 -1.9 acetolactate synthase 2 small subunit compare
BWI76_RS04250 -4.1 -9.6 homoserine kinase compare
BWI76_RS18920 -4.1 -3.6 ATP phosphoribosyltransferase compare
BWI76_RS11965 -4.1 -4.1 orotidine-5'-phosphate decarboxylase compare
BWI76_RS00805 -4.0 -7.5 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS00785 -4.0 -8.0 cystathionine gamma-synthase compare
BWI76_RS09755 -4.0 -7.2 phosphoserine transaminase compare
BWI76_RS07065 -3.9 -6.5 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS05840 -3.8 -5.4 glutamate 5-kinase compare
BWI76_RS23360 -3.8 -5.2 diaminopimelate decarboxylase compare
BWI76_RS02735 -3.7 -6.5 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS04465 -3.6 -6.0 carbamoyl-phosphate synthase small subunit compare
BWI76_RS00845 -3.6 -7.2 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS27385 -3.5 -6.6 orotate phosphoribosyltransferase compare
BWI76_RS00850 -3.5 -10.3 acetylglutamate kinase compare
BWI76_RS25115 -3.4 -7.3 argininosuccinate synthase compare
BWI76_RS01210 -3.4 -5.1 tyrosine recombinase XerC compare
BWI76_RS00400 -3.3 -2.2 glutamine synthetase compare
BWI76_RS09645 -3.3 -2.5 thioredoxin-disulfide reductase compare
BWI76_RS22760 -3.3 -10.3 sulfite reductase subunit beta compare
BWI76_RS18925 -3.3 -7.4 histidinol dehydrogenase compare
BWI76_RS08385 -3.3 -3.0 citrate (Si)-synthase compare
BWI76_RS00975 -3.2 -8.2 dihydroxy-acid dehydratase compare
BWI76_RS23230 -3.2 -4.4 exodeoxyribonuclease V subunit beta compare
BWI76_RS20435 -3.2 -1.8 chorismate synthase compare
BWI76_RS26570 -3.2 -4.2 anion permease compare
BWI76_RS21480 -3.0 -8.3 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BWI76_RS23220 -3.0 -6.6 amino-acid N-acetyltransferase compare
BWI76_RS22755 -3.0 -7.1 phosphoadenosine phosphosulfate reductase compare
BWI76_RS03010 -2.9 -8.1 ornithine carbamoyltransferase compare
BWI76_RS00980 -2.9 -11.0 PLP-dependent threonine dehydratase compare
BWI76_RS02410 -2.9 -2.7 EF-P beta-lysylation protein EpmB compare
BWI76_RS04675 -2.9 -5.9 3-isopropylmalate dehydrogenase compare
BWI76_RS04665 -2.8 -16.7 3-isopropylmalate dehydratase small subunit compare
BWI76_RS04670 -2.7 -7.2 3-isopropylmalate dehydratase large subunit compare
BWI76_RS01655 -2.7 -8.8 homoserine O-succinyltransferase compare
BWI76_RS18955 -2.7 -5.3 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS01800 -2.6 -5.1 glucose-6-phosphate isomerase compare
BWI76_RS22765 -2.6 -12.5 sulfite reductase subunit alpha compare
BWI76_RS04240 -2.6 -2.0 thr operon leader peptide compare
BWI76_RS26000 -2.5 -9.0 aspartate aminotransferase family protein compare
BWI76_RS05200 -2.5 -3.3 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS18165 -2.5 -2.2 NUDIX pyrophosphatase compare
BWI76_RS10990 -2.4 -1.4 dihydroorotase compare
BWI76_RS04685 -2.4 -8.8 putative leucine operon leader peptide compare
BWI76_RS04680 -2.3 -9.4 2-isopropylmalate synthase compare
BWI76_RS09970 -2.3 -5.9 porin OmpA compare
BWI76_RS00180 -2.2 -1.9 F0F1 ATP synthase subunit epsilon compare
BWI76_RS20440 -2.2 -1.8 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS11850 -2.1 -7.3 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS22690 -2.1 -3.4 adenylyl-sulfate kinase compare
BWI76_RS26055 -2.1 -5.5 siroheme synthase compare
BWI76_RS20640 -2.1 -5.6 cysteine synthase A compare
BWI76_RS21465 -2.0 -3.8 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS11845 -2.0 -3.7 tryptophan synthase subunit beta compare
BWI76_RS27430 -1.9 -1.9 (p)ppGpp synthetase compare
BWI76_RS11840 -1.8 -3.8 tryptophan synthase subunit alpha compare
BWI76_RS00985 -1.7 -3.7 transcriptional regulator IlvY compare
BWI76_RS15835 -1.7 -1.7 hypothetical protein compare
BWI76_RS24885 -1.7 -2.1 PTS galactitol transporter subunit IIB compare
BWI76_RS01200 -1.6 -2.7 diaminopimelate epimerase compare
BWI76_RS11855 -1.5 -6.1 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS27915 -1.5 -3.2 YceK/YidQ family lipoprotein compare
BWI76_RS00025 -1.5 -1.3 hypothetical protein compare
BWI76_RS15215 -1.4 -1.4 N-acetyltransferase compare
BWI76_RS09190 -1.4 -2.7 hypothetical protein compare
BWI76_RS11860 -1.4 -4.8 anthranilate synthase component I compare
BWI76_RS09655 -1.3 -2.6 leucine-responsive regulatory protein compare
BWI76_RS04100 -1.3 -3.4 peptide chain release factor 3 compare
BWI76_RS09660 -1.3 -1.4 DNA translocase FtsK compare
BWI76_RS00480 -1.3 -2.7 hypothetical protein compare
BWI76_RS25335 -1.3 -2.4 stringent starvation protein A compare
BWI76_RS11235 -1.3 -1.2 hypothetical protein compare
BWI76_RS05070 -1.2 -2.0 type II secretion system protein GspH compare
BWI76_RS03190 -1.2 -1.5 hypothetical protein compare
BWI76_RS00390 -1.2 -2.9 two-component system sensor histidine kinase NtrB compare
BWI76_RS17720 -1.2 -1.2 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS21505 -1.2 -1.3 hypothetical protein compare
BWI76_RS17290 -1.2 -2.6 formyltetrahydrofolate deformylase compare
BWI76_RS22695 -1.2 -4.4 sulfate adenylyltransferase compare
BWI76_RS23970 -1.2 -2.9 mechanosensitive ion channel protein MscS compare
BWI76_RS15115 -1.1 -4.3 MFS transporter compare
BWI76_RS19685 -1.1 -4.2 lysine transporter compare
BWI76_RS16935 -1.1 -1.1 shikimate dehydrogenase compare
BWI76_RS01220 -1.1 -5.4 DNA-dependent helicase II compare
BWI76_RS04510 -1.1 -1.5 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS11040 -1.1 -3.0 ribonuclease E compare
BWI76_RS21450 -1.1 -2.3 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS11430 -1.1 -1.0 lipoprotein compare
BWI76_RS20380 -1.1 -1.0 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS19025 -1.0 -7.0 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) compare
BWI76_RS09555 -1.0 -3.1 pyruvate oxidase compare
BWI76_RS17530 -1.0 -2.0 hypothetical protein compare
BWI76_RS21685 -1.0 -1.5 hypothetical protein compare
BWI76_RS15660 -1.0 -1.2 hypothetical protein compare
BWI76_RS24285 -1.0 -3.3 cystathionine beta-lyase compare
BWI76_RS00960 -1.0 -3.8 acetolactate synthase 2 catalytic subunit compare
BWI76_RS04955 -1.0 -1.3 hypoxanthine phosphoribosyltransferase compare
BWI76_RS12295 -1.0 -3.9 hypothetical protein compare
BWI76_RS01275 -1.0 -5.2 LysR family transcriptional regulator compare
BWI76_RS15850 -1.0 -2.6 DUF1317 domain-containing protein compare
BWI76_RS23915 -1.0 -2.1 5-formyltetrahydrofolate cyclo-ligase compare
BWI76_RS25065 -0.9 -1.4 polyribonucleotide nucleotidyltransferase compare
BWI76_RS23030 -0.9 -1.6 cobalamin biosynthesis protein CbiM compare
BWI76_RS09650 -0.9 -3.0 hypothetical protein compare
BWI76_RS23320 -0.9 -1.4 hypothetical protein compare
BWI76_RS14410 -0.9 -1.8 hypothetical protein compare
BWI76_RS15685 -0.9 -1.9 hypothetical protein compare
BWI76_RS14075 -0.9 -1.3 TetR family transcriptional regulator compare
BWI76_RS15290 -0.9 -1.1 transcriptional regulator compare
BWI76_RS23480 -0.9 -5.9 EAL domain-containing protein compare
BWI76_RS21140 -0.9 -1.4 molecular chaperone HscA compare
BWI76_RS12330 -0.9 -2.1 hypothetical protein compare
BWI76_RS18270 -0.9 -1.8 hypothetical protein compare
BWI76_RS01630 -0.9 -1.1 16S ribosomal RNA compare
BWI76_RS26590 -0.9 -2.5 transcriptional regulator compare
BWI76_RS18000 -0.9 -1.8 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF compare
BWI76_RS20490 -0.9 -2.4 hypothetical protein compare
BWI76_RS12390 -0.9 -1.8 antibiotic biosynthesis monooxygenase compare
BWI76_RS20650 -0.9 -1.1 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS09240 -0.9 -3.2 phosphoadenosine phosphosulfate reductase compare
BWI76_RS06120 -0.9 -1.3 membrane protein compare
BWI76_RS21370 -0.9 -1.7 ATP-dependent RNA helicase SrmB compare
BWI76_RS17300 -0.9 -0.9 tRNA-Tyr compare
BWI76_RS09315 -0.9 -1.4 hypothetical protein compare
BWI76_RS00355 -0.9 -2.0 DNA polymerase I compare
BWI76_RS11125 -0.9 -1.2 metal-dependent hydrolase compare
BWI76_RS04530 -0.9 -1.3 peptidylprolyl isomerase SurA compare
BWI76_RS10835 -0.9 -1.3 hypothetical protein compare
BWI76_RS19690 -0.9 -1.8 LysR family transcriptional regulator compare
BWI76_RS01350 -0.8 -0.9 NAD(P)H-flavin reductase compare
BWI76_RS19215 -0.8 -1.5 proline-specific peptidase compare
BWI76_RS15680 -0.8 -2.1 hypothetical protein compare
BWI76_RS11130 -0.8 -3.5 PTS glucose transporter subunit IIBC compare
BWI76_RS24110 -0.8 -1.3 YggU family protein compare
BWI76_RS04270 -0.8 -2.7 transaldolase compare
BWI76_RS22705 -0.8 -3.7 siroheme synthase compare
BWI76_RS10245 -0.8 -1.4 aspartate aminotransferase compare
BWI76_RS15645 -0.8 -3.8 gp6 compare
BWI76_RS15110 -0.8 -5.9 putative excinuclease ABC subunit A compare
BWI76_RS10945 -0.8 -1.9 SecY/SecA suppressor protein compare
BWI76_RS07760 -0.8 -2.7 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase compare
BWI76_RS12375 -0.8 -1.8 DNA-invertase hin compare
BWI76_RS09870 -0.8 -4.5 aromatic amino acid aminotransferase compare
BWI76_RS17110 -0.8 -1.2 vitamin B12 ABC transporter permease BtuC compare
BWI76_RS12720 -0.8 -3.2 KTSC domain-containing protein compare
BWI76_RS22470 -0.8 -1.6 transporter permease compare
BWI76_RS20795 -0.8 -1.0 ethanolamine catabolic microcompartment shell protein EutN compare
BWI76_RS04600 -0.8 -2.0 inner membrane protein compare
BWI76_RS00240 -0.8 -1.5 FMN-binding protein MioC compare
BWI76_RS25220 -0.8 -1.4 outer membrane lipid asymmetry maintenance protein MlaD compare
BWI76_RS19245 -0.8 -2.7 dimethylargininase compare
BWI76_RS19035 -0.8 -4.0 dTDP-rhamnosyl transferase compare
BWI76_RS06230 -0.8 -1.8 DNA-binding response regulator compare
BWI76_RS06765 -0.7 -1.6 transcriptional regulator compare
BWI76_RS02810 -0.7 -2.0 sugar ABC transporter permease YjfF compare
BWI76_RS05015 -0.7 -0.9 transcriptional regulator compare
BWI76_RS13400 -0.7 -1.5 GntR family transcriptional regulator compare
BWI76_RS25925 -0.7 -2.6 hypothetical protein compare
BWI76_RS14375 -0.7 -2.3 hypothetical protein compare
BWI76_RS13360 -0.7 -2.4 benzoate transporter compare
BWI76_RS10450 -0.7 -2.2 tRNA-Tyr compare
BWI76_RS17820 -0.7 -2.2 hypothetical protein compare
BWI76_RS21740 -0.7 -1.5 transcriptional regulator, LysR family protein compare
BWI76_RS21325 -0.7 -1.3 hypothetical protein compare
BWI76_RS14915 -0.7 -2.2 hypothetical protein compare
BWI76_RS15600 -0.7 -1.6 hypothetical protein compare
BWI76_RS12420 -0.7 -0.8 peptide ABC transporter substrate-binding protein SapA compare
BWI76_RS14820 -0.7 -1.4 LysR family transcriptional regulator compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in exudates experiments

For exudates Brachypodium distachyon 13-day exudates across organisms