Experiment set10IT066 for Klebsiella michiganensis M5al

200 most important genes:

gene	name	fitness	t score	description
BWI76_RS18930		-8.1	-5.6	histidinol-phosphate transaminase
BWI76_RS21475		-6.9	-6.7	bifunctional chorismate mutase/prephenate dehydrogenase
BWI76_RS20895		-6.4	-4.4	phosphoribosylaminoimidazolesuccinocarboxamide synthase
BWI76_RS01615		-6.3	-8.6	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase
BWI76_RS20965		-6.3	-5.6	phosphoribosylformylglycinamidine cyclo-ligase
BWI76_RS23360		-6.1	-4.2	diaminopimelate decarboxylase
BWI76_RS07065		-6.1	-7.8	5-(carboxyamino)imidazole ribonucleotide synthase
BWI76_RS09755		-6.0	-5.9	phosphoserine transaminase
BWI76_RS18950		-5.9	-5.8	imidazole glycerol phosphate synthase cyclase subunit
BWI76_RS26085		-5.8	-4.0	3-dehydroquinate synthase
BWI76_RS20350		-5.4	-6.2	amidophosphoribosyltransferase
BWI76_RS04470		-5.3	-10.7	carbamoyl phosphate synthase large subunit
BWI76_RS02995		-5.0	-9.2	aspartate carbamoyltransferase
BWI76_RS23920		-5.0	-6.3	D-3-phosphoglycerate dehydrogenase
BWI76_RS04255		-4.9	-12.2	threonine synthase
BWI76_RS00805		-4.9	-6.2	5,10-methylenetetrahydrofolate reductase
BWI76_RS11965		-4.9	-5.6	orotidine-5'-phosphate decarboxylase
BWI76_RS04250		-4.8	-10.2	homoserine kinase
BWI76_RS20355		-4.8	-5.1	colicin V production protein
BWI76_RS04160		-4.8	-6.9	phosphoserine phosphatase
BWI76_RS01610		-4.8	-5.3	phosphoribosylamine--glycine ligase
BWI76_RS00835		-4.7	-17.3	phosphoenolpyruvate carboxylase
BWI76_RS00990		-4.7	-7.5	ketol-acid reductoisomerase
BWI76_RS04465		-4.7	-6.3	carbamoyl-phosphate synthase small subunit
BWI76_RS00850		-4.7	-11.4	acetylglutamate kinase
BWI76_RS18935		-4.7	-8.4	bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase
BWI76_RS23240		-4.7	-4.5	exonuclease V subunit gamma
BWI76_RS21265		-4.6	-13.7	phosphoribosylformylglycinamidine synthase
BWI76_RS23230		-4.4	-3.0	exodeoxyribonuclease V subunit beta
BWI76_RS27385		-4.4	-6.7	orotate phosphoribosyltransferase
BWI76_RS00965		-4.3	-1.9	acetolactate synthase 2 small subunit
BWI76_RS00855		-4.2	-8.2	argininosuccinate lyase
BWI76_RS09910		-4.2	-16.2	dihydroorotate dehydrogenase (quinone)
BWI76_RS01210		-4.1	-2.8	tyrosine recombinase XerC
BWI76_RS05840		-4.1	-7.5	glutamate 5-kinase
BWI76_RS09760		-4.0	-3.2	3-phosphoshikimate 1-carboxyvinyltransferase
BWI76_RS07070		-3.9	-5.0	5-(carboxyamino)imidazole ribonucleotide mutase
BWI76_RS00975		-3.8	-7.2	dihydroxy-acid dehydratase
BWI76_RS18925		-3.8	-7.8	histidinol dehydrogenase
BWI76_RS04645		-3.8	-6.4	3-dehydroquinase
BWI76_RS04245		-3.7	-15.6	bifunctional aspartate kinase/homoserine dehydrogenase I
BWI76_RS25645		-3.7	-9.2	shikimate dehydrogenase
BWI76_RS25115		-3.7	-7.2	argininosuccinate synthase
BWI76_RS18920		-3.6	-4.5	ATP phosphoribosyltransferase
BWI76_RS00845		-3.6	-7.8	N-acetyl-gamma-glutamyl-phosphate reductase
BWI76_RS08385		-3.5	-3.5	citrate (Si)-synthase
BWI76_RS00400		-3.5	-2.4	glutamine synthetase
BWI76_RS27390		-3.5	-4.7	ribonuclease PH
BWI76_RS22760		-3.5	-12.6	sulfite reductase subunit beta
BWI76_RS04665		-3.4	-19.7	3-isopropylmalate dehydratase small subunit
BWI76_RS09645		-3.4	-2.6	thioredoxin-disulfide reductase
BWI76_RS23220		-3.4	-9.5	amino-acid N-acetyltransferase
BWI76_RS22765		-3.4	-13.5	sulfite reductase subunit alpha
BWI76_RS03010		-3.3	-9.9	ornithine carbamoyltransferase
BWI76_RS18940		-3.3	-5.3	imidazole glycerol phosphate synthase subunit HisH
BWI76_RS22755		-3.3	-8.9	phosphoadenosine phosphosulfate reductase
BWI76_RS00785		-3.3	-8.2	cystathionine gamma-synthase
BWI76_RS20435		-3.2	-1.8	chorismate synthase
BWI76_RS21580		-3.2	-3.6	SsrA-binding protein
BWI76_RS10990		-3.1	-3.2	dihydroorotase
BWI76_RS23365		-3.1	-9.1	LysR family transcriptional regulator
BWI76_RS02735		-3.1	-4.6	3'(2'),5'-bisphosphate nucleotidase CysQ
BWI76_RS18955		-3.0	-7.1	bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase
BWI76_RS04240		-3.0	-3.3	thr operon leader peptide
BWI76_RS09660		-3.0	-4.4	DNA translocase FtsK
BWI76_RS01655		-3.0	-10.1	homoserine O-succinyltransferase
BWI76_RS04670		-2.9	-10.6	3-isopropylmalate dehydratase large subunit
BWI76_RS26000		-2.9	-10.1	aspartate aminotransferase family protein
BWI76_RS04675		-2.9	-8.0	3-isopropylmalate dehydrogenase
BWI76_RS05835		-2.9	-4.6	gamma-glutamyl-phosphate reductase
BWI76_RS05200		-2.9	-3.7	bifunctional uridylyltransferase/uridylyl-removing protein
BWI76_RS00980		-2.8	-13.2	PLP-dependent threonine dehydratase
BWI76_RS22690		-2.7	-4.5	adenylyl-sulfate kinase
BWI76_RS21370		-2.7	-2.4	ATP-dependent RNA helicase SrmB
BWI76_RS21480		-2.6	-5.8	phospho-2-dehydro-3-deoxyheptonate aldolase
BWI76_RS01800		-2.6	-5.8	glucose-6-phosphate isomerase
BWI76_RS00180		-2.6	-2.4	F0F1 ATP synthase subunit epsilon
BWI76_RS11840		-2.4	-5.0	tryptophan synthase subunit alpha
BWI76_RS04680		-2.3	-8.4	2-isopropylmalate synthase
BWI76_RS21140		-2.3	-3.3	molecular chaperone HscA
BWI76_RS00355		-2.2	-4.8	DNA polymerase I
BWI76_RS26570		-2.1	-3.9	anion permease
BWI76_RS25335		-2.1	-3.9	stringent starvation protein A
BWI76_RS21465		-2.1	-4.1	bifunctional chorismate mutase/prephenate dehydratase
BWI76_RS04955		-2.1	-3.2	hypoxanthine phosphoribosyltransferase
BWI76_RS00960		-2.1	-7.4	acetolactate synthase 2 catalytic subunit
BWI76_RS04685		-2.1	-7.4	putative leucine operon leader peptide
BWI76_RS26055		-2.0	-9.1	siroheme synthase
BWI76_RS11845		-2.0	-3.7	tryptophan synthase subunit beta
BWI76_RS15660		-2.0	-1.8	hypothetical protein
BWI76_RS04530		-1.9	-2.7	peptidylprolyl isomerase SurA
BWI76_RS02410		-1.9	-2.6	EF-P beta-lysylation protein EpmB
BWI76_RS11850		-1.8	-6.2	bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase
BWI76_RS24285		-1.8	-8.4	cystathionine beta-lyase
BWI76_RS11855		-1.8	-7.1	bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase
BWI76_RS09190		-1.7	-5.8	hypothetical protein
BWI76_RS02530		-1.7	-2.1	tRNA dimethylallyltransferase
BWI76_RS01350		-1.6	-1.5	NAD(P)H-flavin reductase
BWI76_RS20650		-1.6	-1.8	phosphoenolpyruvate--protein phosphotransferase
BWI76_RS15290		-1.6	-1.6	transcriptional regulator
BWI76_RS16895		-1.5	-2.0	3-(3-hydroxy-phenyl)propionate transporter MhpT
BWI76_RS02725		-1.5	-1.6	HxlR family transcriptional regulator
BWI76_RS01200		-1.5	-1.9	diaminopimelate epimerase
BWI76_RS04510		-1.5	-2.5	bis(5'-nucleosyl)-tetraphosphatase (symmetrical)
BWI76_RS05070		-1.5	-2.8	type II secretion system protein GspH
BWI76_RS00985		-1.4	-3.2	transcriptional regulator IlvY
BWI76_RS09655		-1.4	-3.2	leucine-responsive regulatory protein
BWI76_RS00390		-1.4	-4.2	two-component system sensor histidine kinase NtrB
BWI76_RS15705		-1.4	-4.8	putative holin protein
BWI76_RS09970		-1.4	-3.2	porin OmpA
BWI76_RS15685		-1.4	-2.5	hypothetical protein
BWI76_RS18140		-1.4	-2.8	zinc ABC transporter permease
BWI76_RS20440		-1.4	-1.1	50S ribosomal protein L3 N(5)-glutamine methyltransferase
BWI76_RS22695		-1.4	-4.3	sulfate adenylyltransferase
BWI76_RS17720		-1.3	-1.3	muramoyltetrapeptide carboxypeptidase
BWI76_RS12985		-1.3	-1.6	transcriptional regulator
BWI76_RS24900		-1.3	-1.8	DeoR family transcriptional regulator
BWI76_RS21450		-1.3	-2.7	23S rRNA pseudouridine(1911/1915/1917) synthase
BWI76_RS15115		-1.3	-5.2	MFS transporter
BWI76_RS02580		-1.2	-1.6	23S rRNA (guanosine(2251)-2'-O)-methyltransferase
BWI76_RS05450		-1.2	-2.0	ribonuclease HI
BWI76_RS14840		-1.2	-3.8	hypothetical protein
BWI76_RS01195		-1.2	-1.7	membrane protein
BWI76_RS23480		-1.2	-7.3	EAL domain-containing protein
BWI76_RS27430		-1.2	-1.4	(p)ppGpp synthetase
BWI76_RS01220		-1.2	-4.7	DNA-dependent helicase II
BWI76_RS11980		-1.2	-1.7	DeoR family transcriptional regulator
BWI76_RS11860		-1.2	-4.1	anthranilate synthase component I
BWI76_RS19010		-1.2	-2.9	polysaccharide pyruvyl transferase yvff
BWI76_RS15700		-1.1	-3.3	hypothetical protein
BWI76_RS04715		-1.1	-2.2	division/cell wall cluster transcriptional repressor MraZ
BWI76_RS16485		-1.1	-1.7	ribonuclease T
BWI76_RS15835		-1.1	-1.2	hypothetical protein
BWI76_RS07780		-1.1	-1.3	hypothetical protein
BWI76_RS13275		-1.1	-1.6	hypothetical protein
BWI76_RS06525		-1.1	-3.3	ATP-dependent Clp protease proteolytic subunit
BWI76_RS18360		-1.1	-1.4	aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase family protein
BWI76_RS22085		-1.1	-3.5	L-valine transporter subunit YgaH
BWI76_RS05015		-1.1	-1.6	transcriptional regulator
BWI76_RS06475		-1.1	-1.0	protoheme IX farnesyltransferase
BWI76_RS13320		-1.0	-2.1	putative LpxA-like enzyme
BWI76_RS19025		-1.0	-5.8	phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating)
BWI76_RS13250		-1.0	-1.1	cytochrome b561
BWI76_RS15950		-1.0	-1.8	dethiobiotin synthase
BWI76_RS01275		-1.0	-4.5	LysR family transcriptional regulator
BWI76_RS08515		-1.0	-1.9	acyl-CoA thioesterase YbgC
BWI76_RS16195		-1.0	-1.5	hypothetical protein
BWI76_RS11130		-1.0	-4.2	PTS glucose transporter subunit IIBC
BWI76_RS23030		-1.0	-2.3	cobalamin biosynthesis protein CbiM
BWI76_RS15680		-1.0	-2.0	hypothetical protein
BWI76_RS26775		-0.9	-3.6	endo-1,4-D-glucanase
BWI76_RS15605		-0.9	-2.2	hypothetical protein
BWI76_RS06765		-0.9	-2.9	transcriptional regulator
BWI76_RS12145		-0.9	-1.3	hypothetical protein
BWI76_RS21000		-0.9	-4.5	exopolyphosphatase
BWI76_RS15015		-0.9	-1.2	DUF2132 domain-containing protein
BWI76_RS20640		-0.9	-2.8	cysteine synthase A
BWI76_RS06490		-0.9	-2.7	cytochrome ubiquinol oxidase subunit I
BWI76_RS06185		-0.9	-3.9	shikimate kinase II
BWI76_RS22805		-0.9	-4.8	GTP diphosphokinase
BWI76_RS04305		-0.9	-0.9	molecular chaperone DnaJ
BWI76_RS00345		-0.9	-2.5	protein disulfide oxidoreductase DsbA
BWI76_RS23885		-0.9	-1.5	2-octaprenylphenol hydroxylase
BWI76_RS19035		-0.9	-3.8	dTDP-rhamnosyl transferase
BWI76_RS15650		-0.9	-3.9	gp5
BWI76_RS13560		-0.9	-0.9	amino acid ABC transporter substrate-binding subunit
BWI76_RS04100		-0.9	-2.5	peptide chain release factor 3
BWI76_RS09110		-0.9	-1.6	glutathione ABC transporter permease GsiD
BWI76_RS21560		-0.9	-2.6	DNA repair protein RecN
BWI76_RS02050		-0.9	-1.7	CidA/LrgA family protein
BWI76_RS06295		-0.9	-3.3	S-adenosylmethionine:tRNA ribosyltransferase-isomerase
BWI76_RS15350		-0.9	-1.0	hypothetical protein
BWI76_RS10445		-0.9	-3.4	hypothetical protein
BWI76_RS24585		-0.9	-2.2	glycerol dehydrogenase
BWI76_RS10625		-0.9	-4.8	hypothetical protein
BWI76_RS02985		-0.9	-3.5	reactive intermediate/imine deaminase
BWI76_RS10950		-0.9	-2.2	MFS transporter
BWI76_RS15110		-0.8	-6.1	putative excinuclease ABC subunit A
BWI76_RS09650		-0.8	-3.0	hypothetical protein
BWI76_RS12125		-0.8	-1.9	hypothetical protein
BWI76_RS10745		-0.8	-1.0	hypothetical protein
BWI76_RS25920		-0.8	-0.9	peptidylprolyl isomerase
BWI76_RS11150		-0.8	-1.4	membrane protein
BWI76_RS12280		-0.8	-1.8	hypothetical protein
BWI76_RS21685		-0.8	-1.3	hypothetical protein
BWI76_RS00385		-0.8	-5.6	nitrogen assimilation regulatory protein
BWI76_RS10835		-0.8	-1.3	hypothetical protein
BWI76_RS19375		-0.8	-1.7	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase
BWI76_RS24025		-0.8	-3.3	agmatinase
BWI76_RS15565		-0.8	-1.7	hypothetical protein
BWI76_RS27875		-0.8	-1.2	membrane protein
BWI76_RS10245		-0.8	-2.1	aspartate aminotransferase
BWI76_RS08375		-0.8	-1.9	pyroglutamyl-peptidase I
BWI76_RS06535		-0.8	-2.7	endopeptidase La
BWI76_RS04605		-0.8	-1.1	thiamine ABC transporter ATP-binding protein
BWI76_RS17780		-0.8	-2.4	septum formation inhibitor
BWI76_RS01795		-0.8	-3.6	hypothetical protein
BWI76_RS23915		-0.8	-1.9	5-formyltetrahydrofolate cyclo-ligase
BWI76_RS01630		-0.8	-1.0	16S ribosomal RNA
BWI76_RS15825		-0.8	-1.1	hypothetical protein

Specific Phenotypes

For 2 genes in this experiment

For supernatant Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days in Klebsiella michiganensis M5al

For supernatant Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days across organisms