Experiment set10IT063 for Cupriavidus basilensis FW507-4G11

Compare to:

Protocatechuic Acid carbon source

Genes with specific phenotypes:

  gene name fitness t score description  
RR42_RS32065 -4.2 -7.6 protocatechuate 3,4-dioxygenase, beta subunit (EC 1.13.11.3) (from data) conserved
RR42_RS32060 -3.8 -7.3 protocatechuate 3,4-dioxygenase conserved
RR42_RS26235 -2.0 -5.6 GntR family transcriptional regulator compare
RR42_RS34380 -1.9 -6.3 dihydrolipoamide dehydrogenase compare
RR42_RS15395 -1.5 -5.1 IclR family transcriptional regulator compare
RR42_RS28940 +1.5 9.7 Bcr/CflA family drug resistance efflux transporter compare
RR42_RS26295 +1.5 7.1 GntR family transcriptional regulator compare
RR42_RS18805 +1.7 8.5 peptidase compare
RR42_RS35455 +1.7 8.9 membrane protein compare
RR42_RS30955 +2.0 5.4 histidine kinase compare
RR42_RS13385 +2.1 9.7 peptide ABC transporter substrate-binding protein compare
RR42_RS13370 +2.1 7.1 microcin ABC transporter ATP-binding protein compare
RR42_RS13380 +2.2 8.0 microcin ABC transporter permease compare
RR42_RS30525 +2.2 8.4 LysR family transcriptional regulator compare
RR42_RS13375 +2.3 9.4 peptide ABC transporter permease compare
RR42_RS37050 +2.4 10.3 ABC transporter permease compare
RR42_RS30520 +3.0 5.2 gentisate 1,2-dioxygenase compare
RR42_RS30505 +3.1 5.1 salicylate hydroxylase compare
RR42_RS37040 +3.2 19.3 sulfite reductase subunit alpha compare
RR42_RS37060 +3.4 17.0 membrane protein compare
RR42_RS30515 +4.5 8.0 5-carboxymethyl-2-hydroxymuconate isomerase compare
RR42_RS32970 +5.1 8.5 benzoylformate decarboxylase conserved
RR42_RS21940 +5.9 5.1 4-hydroxybenzoate 3-monooxygenase (EC 1.14.13.2) (from data) compare
RR42_RS31695 +7.0 17.2 hypothetical protein compare


Specific phenotypes for carbon source Protocatechuic Acid across organisms