Experiment set10IT061 for Klebsiella michiganensis M5al

Compare to:

LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x

200 most important genes:

  gene name fitness t score description  
BWI76_RS01210 -4.4 -5.7 tyrosine recombinase XerC compare
BWI76_RS15215 -4.4 -1.8 N-acetyltransferase compare
BWI76_RS09660 -4.1 -3.9 DNA translocase FtsK compare
BWI76_RS23240 -4.0 -4.7 exonuclease V subunit gamma compare
BWI76_RS04305 -3.5 -1.5 molecular chaperone DnaJ compare
BWI76_RS18140 -3.2 -5.6 zinc ABC transporter permease compare
BWI76_RS09970 -3.2 -7.3 porin OmpA compare
BWI76_RS23230 -3.2 -3.7 exodeoxyribonuclease V subunit beta compare
BWI76_RS24400 -3.2 -8.0 outer membrane channel protein TolC compare
BWI76_RS26570 -3.1 -3.7 anion permease compare
BWI76_RS02530 -3.1 -3.0 tRNA dimethylallyltransferase compare
BWI76_RS04715 -3.0 -3.1 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS24945 -3.0 -1.7 glutamine amidotransferase compare
BWI76_RS06780 -2.9 -7.6 MexE family multidrug efflux RND transporter periplasmic adaptor subunit compare
BWI76_RS09640 -2.9 -5.1 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS08495 -2.8 -7.8 cytochrome bd-I ubiquinol oxidase subunit I compare
BWI76_RS00345 -2.8 -4.2 protein disulfide oxidoreductase DsbA compare
BWI76_RS01325 -2.7 -3.6 twin-arginine translocase subunit TatB compare
BWI76_RS26620 -2.7 -1.6 Fe-S biogenesis protein NfuA compare
BWI76_RS25220 -2.6 -3.5 outer membrane lipid asymmetry maintenance protein MlaD compare
BWI76_RS18135 -2.6 -5.1 zinc ABC transporter ATP-binding protein ZnuC compare
BWI76_RS01135 -2.6 -6.7 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
BWI76_RS00240 -2.6 -2.9 FMN-binding protein MioC compare
BWI76_RS25225 -2.6 -5.1 ABC transporter permease compare
BWI76_RS19905 -2.4 -7.0 OmpK36 porin compare
BWI76_RS21070 -2.3 -3.0 outer membrane protein assembly factor BamB compare
BWI76_RS02410 -2.3 -2.6 EF-P beta-lysylation protein EpmB compare
BWI76_RS01110 -2.3 -4.5 TDP-fucosamine acetyltransferase compare
BWI76_RS18605 -2.3 -2.2 oxidoreductase molybdopterin-binding protein compare
BWI76_RS09635 -2.3 -3.0 amino acid ABC transporter ATP-binding protein compare
BWI76_RS18130 -2.3 -2.7 zinc ABC transporter substrate-binding protein compare
BWI76_RS06775 -2.2 -9.3 multidrug efflux RND transporter permease subunit compare
BWI76_RS23885 -2.1 -2.1 2-octaprenylphenol hydroxylase compare
BWI76_RS01115 -2.1 -3.9 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS27310 -2.1 -8.8 glycosyltransferase compare
BWI76_RS25230 -2.1 -6.5 phospholipid ABC transporter ATP-binding protein MlaF compare
BWI76_RS19850 -2.0 -2.3 tRNA-Pro compare
BWI76_RS25215 -2.0 -3.5 phospholipid-binding protein MlaC compare
BWI76_RS20475 -1.9 -4.7 phospholipid-binding lipoprotein MlaA compare
BWI76_RS00875 -1.9 -5.9 DNA-binding transcriptional regulator FabR compare
BWI76_RS17720 -1.9 -1.5 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS17190 -1.8 -2.7 TonB system transport protein TonB compare
BWI76_RS22625 -1.8 -2.4 transcriptional regulator compare
BWI76_RS15835 -1.8 -1.7 hypothetical protein compare
BWI76_RS15660 -1.8 -1.7 hypothetical protein compare
BWI76_RS01090 -1.8 -5.6 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
BWI76_RS24280 -1.8 -5.1 biopolymer transporter ExbB compare
BWI76_RS01095 -1.7 -2.8 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS15035 -1.7 -1.8 metal ABC transporter permease compare
BWI76_RS25335 -1.7 -3.0 stringent starvation protein A compare
BWI76_RS06740 -1.7 -4.1 50S ribosomal protein L36 compare
BWI76_RS20650 -1.7 -1.1 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS24275 -1.7 -3.9 biopolymer transport protein ExbD compare
BWI76_RS15825 -1.7 -2.0 hypothetical protein compare
BWI76_RS22950 -1.7 -1.6 membrane protein compare
BWI76_RS25600 -1.6 -1.1 tRNA-Thr compare
BWI76_RS26670 -1.6 -6.6 two-component sensor histidine kinase compare
BWI76_RS08980 -1.6 -1.5 DNA starvation/stationary phase protection protein compare
BWI76_RS01080 -1.6 -6.8 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
BWI76_RS26665 -1.6 -2.5 DNA-binding response regulator compare
BWI76_RS27680 -1.5 -3.8 TetR family transcriptional regulator compare
BWI76_RS01350 -1.5 -1.2 NAD(P)H-flavin reductase compare
BWI76_RS01125 -1.5 -5.2 4-alpha-L-fucosyltransferase compare
BWI76_RS09190 -1.5 -4.5 hypothetical protein compare
BWI76_RS15115 -1.5 -6.5 MFS transporter compare
BWI76_RS19805 -1.5 -2.3 Bcr/CflA family multidrug efflux MFS transporter compare
BWI76_RS11700 -1.4 -1.4 hypothetical protein compare
BWI76_RS24885 -1.4 -1.8 PTS galactitol transporter subunit IIB compare
BWI76_RS08500 -1.4 -2.2 cytochrome d ubiquinol oxidase subunit 2 compare
BWI76_RS15620 -1.4 -2.0 hypothetical protein compare
BWI76_RS17980 -1.4 -5.2 RNA chaperone ProQ compare
BWI76_RS26405 -1.4 -1.8 16S rRNA (guanine(966)-N(2))-methyltransferase compare
BWI76_RS09315 -1.4 -1.8 hypothetical protein compare
BWI76_RS04530 -1.4 -1.3 peptidylprolyl isomerase SurA compare
BWI76_RS01085 -1.4 -4.7 polysaccharide chain length modulation protein compare
BWI76_RS19700 -1.3 -2.5 deoxyribonuclease IV compare
BWI76_RS02180 -1.3 -1.2 hypothetical protein compare
BWI76_RS04100 -1.3 -2.8 peptide chain release factor 3 compare
BWI76_RS26635 -1.3 -3.3 hypothetical protein compare
BWI76_RS03045 -1.3 -1.3 hypothetical protein compare
BWI76_RS01870 -1.3 -2.4 diacylglycerol kinase compare
BWI76_RS26390 -1.3 -3.8 cell division protein FtsX compare
BWI76_RS00355 -1.3 -2.1 DNA polymerase I compare
BWI76_RS01330 -1.2 -3.1 twin-arginine translocase subunit TatC compare
BWI76_RS25060 -1.2 -3.0 lipoprotein NlpI compare
BWI76_RS06545 -1.2 -3.5 peptidylprolyl isomerase compare
BWI76_RS24925 -1.2 -1.2 DnaA initiator-associating protein DiaA compare
BWI76_RS27430 -1.2 -1.1 (p)ppGpp synthetase compare
BWI76_RS04955 -1.2 -1.3 hypoxanthine phosphoribosyltransferase compare
BWI76_RS15830 -1.2 -2.8 hypothetical protein compare
BWI76_RS13400 -1.2 -3.5 GntR family transcriptional regulator compare
BWI76_RS19845 -1.2 -2.9 phosphatase compare
BWI76_RS16990 -1.2 -3.2 ABC transporter ATP-binding protein compare
BWI76_RS08720 -1.2 -1.4 imidazolonepropionase compare
BWI76_RS11980 -1.2 -2.0 DeoR family transcriptional regulator compare
BWI76_RS23830 -1.2 -5.8 hypothetical protein compare
BWI76_RS20715 -1.2 -2.0 RpoE-regulated lipoprotein compare
BWI76_RS20925 -1.2 -3.7 peptidase M48 compare
BWI76_RS21350 -1.1 -1.4 anti-RNA polymerase sigma factor SigE compare
BWI76_RS05050 -1.1 -2.3 general secretion pathway protein GspL compare
BWI76_RS01220 -1.1 -4.7 DNA-dependent helicase II compare
BWI76_RS26200 -1.1 -4.8 starch synthase compare
BWI76_RS23265 -1.1 -1.5 hypothetical protein compare
BWI76_RS27290 -1.1 -4.8 hypothetical protein compare
BWI76_RS22095 -1.1 -2.7 multidrug export protein EmrA compare
BWI76_RS15850 -1.1 -1.4 DUF1317 domain-containing protein compare
BWI76_RS07740 -1.1 -1.6 Fe2+-enterobactin ABC transporter substrate-binding protein compare
BWI76_RS08605 -1.1 -2.3 phosphoglyceromutase compare
BWI76_RS16445 -1.1 -2.9 auxiliary transporter membrane fusion protein compare
BWI76_RS22050 -1.1 -4.1 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI conserved
BWI76_RS14050 -1.1 -1.8 AP endonuclease, family 2 compare
BWI76_RS22850 -1.0 -1.7 tRNA pseudouridine synthase TruC compare
BWI76_RS13560 -1.0 -1.0 amino acid ABC transporter substrate-binding subunit compare
BWI76_RS16000 -1.0 -1.3 multidrug transporter subunit MdtI compare
BWI76_RS04510 -1.0 -1.4 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS16485 -1.0 -1.5 ribonuclease T compare
BWI76_RS01105 -1.0 -2.2 glucose-1-phosphate thymidylyltransferase compare
BWI76_RS22450 -1.0 -1.4 selenoprotein W-related protein compare
BWI76_RS22235 -1.0 -2.0 transcriptional regulator GutM compare
BWI76_RS27820 -1.0 -1.5 ilvB operon leader peptide IvbL compare
BWI76_RS05200 -1.0 -1.7 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS08525 -1.0 -3.5 colicin transporter compare
BWI76_RS16240 -0.9 -2.1 anti-adapter protein IraM compare
BWI76_RS10820 -0.9 -3.5 iron uptake system protein EfeO compare
BWI76_RS21810 -0.9 -1.4 universal stress protein compare
BWI76_RS15200 -0.9 -2.1 glutaminase compare
BWI76_RS19010 -0.9 -1.5 polysaccharide pyruvyl transferase yvff compare
BWI76_RS15680 -0.9 -1.8 hypothetical protein compare
BWI76_RS18455 -0.9 -1.2 tRNA-Ser compare
BWI76_RS17400 -0.9 -1.1 transporter compare
BWI76_RS12860 -0.9 -1.8 hypothetical protein compare
BWI76_RS18430 -0.9 -2.8 hypothetical protein compare
BWI76_RS16995 -0.9 -4.2 Fe-S cluster assembly protein SufB compare
BWI76_RS15110 -0.9 -6.3 putative excinuclease ABC subunit A compare
BWI76_RS26395 -0.9 -1.8 cell division protein FtsE compare
BWI76_RS27440 -0.9 -2.5 DNA helicase RecG compare
BWI76_RS20785 -0.9 -0.8 ethanolamine utilization protein EutJ compare
BWI76_RS24910 -0.9 -2.7 rRNA (cytidine-2'-O-)-methyltransferase compare
BWI76_RS09515 -0.9 -1.7 arginine ABC transporter substrate-binding protein compare
BWI76_RS00180 -0.9 -1.2 F0F1 ATP synthase subunit epsilon compare
BWI76_RS12295 -0.9 -2.7 hypothetical protein compare
BWI76_RS12330 -0.9 -1.7 hypothetical protein compare
BWI76_RS05970 -0.9 -1.7 hypothetical protein compare
BWI76_RS06530 -0.9 -2.5 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS21565 -0.9 -1.0 outer membrane protein assembly factor BamE compare
BWI76_RS09725 -0.9 -2.6 MurR/RpiR family transcriptional regulator compare
BWI76_RS01885 -0.8 -1.1 CsbD family protein compare
BWI76_RS25960 -0.8 -2.3 NUDIX hydrolase compare
BWI76_RS11275 -0.8 -3.3 sensor protein PhoQ compare
BWI76_RS11825 -0.8 -2.4 LysR family transcriptional regulator compare
BWI76_RS26440 -0.8 -1.1 hypothetical protein compare
BWI76_RS17785 -0.8 -3.7 septum site-determining protein MinD compare
BWI76_RS20720 -0.8 -1.1 hypothetical protein compare
BWI76_RS20900 -0.8 -1.0 outer membrane protein assembly factor BamC compare
BWI76_RS21450 -0.8 -1.8 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS17780 -0.8 -2.9 septum formation inhibitor compare
BWI76_RS15840 -0.8 -2.1 prophage protein compare
BWI76_RS07730 -0.8 -1.0 iron-enterobactin transporter membrane protein compare
BWI76_RS05965 -0.8 -1.8 hypothetical protein compare
BWI76_RS15705 -0.8 -2.1 putative holin protein compare
BWI76_RS17300 -0.8 -1.2 tRNA-Tyr compare
BWI76_RS22100 -0.8 -2.5 multidrug effux MFS transporter subunit EmrB compare
BWI76_RS21690 -0.8 -1.6 hypothetical protein compare
BWI76_RS21250 -0.8 -2.7 two-component system response regulator GlrR compare
BWI76_RS06400 -0.8 -1.7 oxidative-stress-resistance chaperone compare
BWI76_RS19035 -0.8 -2.7 dTDP-rhamnosyl transferase compare
BWI76_RS27305 -0.8 -3.8 glycosyl transferase compare
BWI76_RS22200 -0.8 -2.9 iron ABC transporter compare
BWI76_RS11990 -0.8 -2.5 exoribonuclease II compare
BWI76_RS06525 -0.8 -3.1 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS14670 -0.8 -1.6 hypothetical protein compare
BWI76_RS11200 -0.8 -2.1 transpeptidase compare
BWI76_RS16980 -0.8 -2.0 bifunctional cysteine desulfurase/selenocysteine lyase compare
BWI76_RS21440 -0.8 -5.1 ATP-dependent chaperone ClpB compare
BWI76_RS16455 -0.8 -1.2 superoxide dismutase compare
BWI76_RS10700 -0.8 -2.4 XRE family transcriptional regulator compare
BWI76_RS12390 -0.7 -1.0 antibiotic biosynthesis monooxygenase compare
BWI76_RS26775 -0.7 -2.1 endo-1,4-D-glucanase compare
BWI76_RS00260 -0.7 -4.3 ATPase RavA compare
BWI76_RS20150 -0.7 -1.4 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS20160 -0.7 -2.3 NADH-quinone oxidoreductase subunit H compare
BWI76_RS00795 -0.7 -0.8 carboxymuconolactone decarboxylase compare
BWI76_RS23825 -0.7 -3.1 hypothetical protein compare
BWI76_RS08230 -0.7 -1.8 hypothetical protein compare
BWI76_RS13680 -0.7 -2.0 methyl viologen resistance protein SmvA compare
BWI76_RS27875 -0.7 -0.9 membrane protein compare
BWI76_RS17805 -0.7 -0.8 membrane protein compare
BWI76_RS12405 -0.7 -3.6 diguanylate phosphodiesterase compare
BWI76_RS01170 -0.7 -2.4 uroporphyrinogen-III C-methyltransferase compare
BWI76_RS26460 -0.7 -2.3 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS12785 -0.7 -1.9 heat-shock protein HslJ compare
BWI76_RS27385 -0.7 -2.5 orotate phosphoribosyltransferase compare
BWI76_RS22060 -0.7 -4.5 ribonucleotide-diphosphate reductase subunit beta conserved
BWI76_RS04425 -0.7 -1.7 oxaloacetate decarboxylase subunit gamma compare
BWI76_RS00750 -0.7 -2.3 ATP-dependent protease ATP-binding subunit HslU compare
BWI76_RS22055 -0.7 -2.9 ribonucleotide-diphosphate reductase conserved
BWI76_RS17990 -0.7 -3.3 paraquat-inducible membrane protein A compare
BWI76_RS12345 -0.7 -1.8 nitrite transporter compare
BWI76_RS23360 -0.7 -1.3 diaminopimelate decarboxylase compare
BWI76_RS16745 -0.7 -2.9 alpha-acetolactate decarboxylase compare


Specific Phenotypes

For 2 genes in this experiment

For supernatant Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted in Klebsiella michiganensis M5al

For supernatant Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted across organisms