Experiment set10IT060 for Klebsiella michiganensis M5al

Compare to:

Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x

200 most important genes:

  gene name fitness t score description  
BWI76_RS23920 -6.7 -4.6 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS20355 -6.5 -5.6 colicin V production protein compare
BWI76_RS18920 -6.4 -4.4 ATP phosphoribosyltransferase compare
BWI76_RS04465 -6.3 -4.3 carbamoyl-phosphate synthase small subunit compare
BWI76_RS18935 -6.2 -8.1 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS09755 -6.2 -6.1 phosphoserine transaminase compare
BWI76_RS18940 -6.1 -5.9 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS00805 -6.1 -5.9 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS18950 -6.0 -5.9 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS23360 -6.0 -4.1 diaminopimelate decarboxylase compare
BWI76_RS01210 -5.9 -5.0 tyrosine recombinase XerC compare
BWI76_RS23220 -5.7 -7.8 amino-acid N-acetyltransferase compare
BWI76_RS26085 -5.5 -3.8 3-dehydroquinate synthase compare
BWI76_RS04470 -5.3 -9.5 carbamoyl phosphate synthase large subunit compare
BWI76_RS04645 -5.2 -6.2 3-dehydroquinase compare
BWI76_RS18925 -5.2 -7.0 histidinol dehydrogenase compare
BWI76_RS22755 -5.1 -8.5 phosphoadenosine phosphosulfate reductase compare
BWI76_RS04160 -5.0 -5.9 phosphoserine phosphatase compare
BWI76_RS09660 -5.0 -3.4 DNA translocase FtsK compare
BWI76_RS20895 -5.0 -4.8 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS01615 -4.9 -9.4 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS00850 -4.9 -8.6 acetylglutamate kinase compare
BWI76_RS04255 -4.9 -9.8 threonine synthase compare
BWI76_RS25115 -4.7 -7.2 argininosuccinate synthase compare
BWI76_RS00785 -4.7 -7.1 cystathionine gamma-synthase compare
BWI76_RS20350 -4.7 -7.1 amidophosphoribosyltransferase compare
BWI76_RS18955 -4.6 -4.5 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS23240 -4.5 -4.4 exonuclease V subunit gamma compare
BWI76_RS17720 -4.5 -2.0 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS07070 -4.4 -5.2 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS00990 -4.4 -9.7 ketol-acid reductoisomerase compare
BWI76_RS23365 -4.3 -7.7 LysR family transcriptional regulator compare
BWI76_RS02995 -4.3 -9.9 aspartate carbamoyltransferase compare
BWI76_RS22690 -4.3 -5.0 adenylyl-sulfate kinase compare
BWI76_RS09760 -4.3 -3.9 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS20965 -4.3 -6.5 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS04250 -4.1 -9.9 homoserine kinase compare
BWI76_RS00835 -4.0 -14.1 phosphoenolpyruvate carboxylase compare
BWI76_RS00975 -4.0 -11.8 dihydroxy-acid dehydratase compare
BWI76_RS05840 -4.0 -7.5 glutamate 5-kinase compare
BWI76_RS25315 -3.9 -10.0 glutamate synthase large subunit compare
BWI76_RS21265 -3.9 -13.9 phosphoribosylformylglycinamidine synthase compare
BWI76_RS00845 -3.9 -8.6 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS00965 -3.9 -1.8 acetolactate synthase 2 small subunit compare
BWI76_RS00855 -3.8 -7.7 argininosuccinate lyase compare
BWI76_RS25320 -3.8 -8.9 glutamate synthase compare
BWI76_RS11965 -3.8 -3.3 orotidine-5'-phosphate decarboxylase compare
BWI76_RS18930 -3.8 -3.2 histidinol-phosphate transaminase compare
BWI76_RS03010 -3.8 -6.6 ornithine carbamoyltransferase compare
BWI76_RS09910 -3.7 -15.8 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS23230 -3.7 -4.3 exodeoxyribonuclease V subunit beta compare
BWI76_RS01655 -3.6 -7.9 homoserine O-succinyltransferase compare
BWI76_RS05835 -3.6 -4.2 gamma-glutamyl-phosphate reductase compare
BWI76_RS15115 -3.5 -10.2 MFS transporter compare
BWI76_RS00390 -3.5 -8.8 two-component system sensor histidine kinase NtrB compare
BWI76_RS04245 -3.5 -14.6 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS09970 -3.4 -8.5 porin OmpA compare
BWI76_RS20435 -3.3 -1.9 chorismate synthase compare
BWI76_RS01610 -3.3 -5.2 phosphoribosylamine--glycine ligase compare
BWI76_RS05015 -3.2 -2.9 transcriptional regulator compare
BWI76_RS11845 -3.2 -3.5 tryptophan synthase subunit beta compare
BWI76_RS01200 -3.2 -3.0 diaminopimelate epimerase compare
BWI76_RS21475 -3.1 -4.6 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS22805 -3.1 -8.4 GTP diphosphokinase compare
BWI76_RS00385 -3.1 -8.5 nitrogen assimilation regulatory protein compare
BWI76_RS11840 -3.0 -5.1 tryptophan synthase subunit alpha compare
BWI76_RS11860 -3.0 -7.5 anthranilate synthase component I compare
BWI76_RS15825 -3.0 -3.2 hypothetical protein compare
BWI76_RS11850 -3.0 -9.7 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS08385 -2.9 -4.7 citrate (Si)-synthase compare
BWI76_RS27385 -2.9 -6.1 orotate phosphoribosyltransferase compare
BWI76_RS02735 -2.8 -6.1 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS00980 -2.8 -8.8 PLP-dependent threonine dehydratase compare
BWI76_RS22765 -2.8 -10.3 sulfite reductase subunit alpha compare
BWI76_RS24285 -2.8 -6.8 cystathionine beta-lyase compare
BWI76_RS04665 -2.8 -17.2 3-isopropylmalate dehydratase small subunit compare
BWI76_RS04240 -2.8 -3.2 thr operon leader peptide compare
BWI76_RS04670 -2.7 -8.4 3-isopropylmalate dehydratase large subunit compare
BWI76_RS00180 -2.7 -2.3 F0F1 ATP synthase subunit epsilon compare
BWI76_RS21140 -2.7 -3.1 molecular chaperone HscA compare
BWI76_RS21465 -2.7 -3.1 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS04675 -2.6 -7.9 3-isopropylmalate dehydrogenase compare
BWI76_RS10990 -2.6 -2.0 dihydroorotase compare
BWI76_RS04715 -2.6 -3.9 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS26570 -2.6 -3.9 anion permease compare
BWI76_RS22760 -2.6 -5.4 sulfite reductase subunit beta compare
BWI76_RS15110 -2.5 -14.6 putative excinuclease ABC subunit A compare
BWI76_RS27390 -2.5 -4.8 ribonuclease PH compare
BWI76_RS02410 -2.5 -2.4 EF-P beta-lysylation protein EpmB compare
BWI76_RS08525 -2.4 -4.9 colicin transporter compare
BWI76_RS07065 -2.4 -9.5 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS21580 -2.4 -2.6 SsrA-binding protein compare
BWI76_RS00345 -2.3 -3.9 protein disulfide oxidoreductase DsbA compare
BWI76_RS00400 -2.3 -2.1 glutamine synthetase compare
BWI76_RS16965 -2.2 -4.7 murein lipoprotein compare
BWI76_RS04680 -2.1 -7.8 2-isopropylmalate synthase compare
BWI76_RS25645 -2.1 -8.3 shikimate dehydrogenase compare
BWI76_RS11855 -2.1 -5.8 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS02530 -2.1 -3.0 tRNA dimethylallyltransferase compare
BWI76_RS26000 -2.0 -7.1 aspartate aminotransferase family protein compare
BWI76_RS04510 -2.0 -2.2 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS01325 -2.0 -3.5 twin-arginine translocase subunit TatB compare
BWI76_RS26460 -1.9 -5.6 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS17975 -1.9 -4.5 tail-specific protease compare
BWI76_RS00960 -1.9 -4.0 acetolactate synthase 2 catalytic subunit compare
BWI76_RS26200 -1.9 -8.1 starch synthase compare
BWI76_RS26395 -1.8 -5.5 cell division protein FtsE compare
BWI76_RS05200 -1.8 -2.3 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS06530 -1.8 -5.2 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS08530 -1.8 -3.8 protein TolA compare
BWI76_RS09640 -1.8 -4.3 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS27440 -1.8 -4.6 DNA helicase RecG compare
BWI76_RS19010 -1.7 -3.7 polysaccharide pyruvyl transferase yvff compare
BWI76_RS20650 -1.7 -1.9 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS17385 -1.7 -7.4 nitrate regulatory protein compare
BWI76_RS15835 -1.7 -1.0 hypothetical protein compare
BWI76_RS09645 -1.7 -2.2 thioredoxin-disulfide reductase compare
BWI76_RS25335 -1.7 -3.8 stringent starvation protein A compare
BWI76_RS23265 -1.6 -3.2 hypothetical protein compare
BWI76_RS23480 -1.6 -9.2 EAL domain-containing protein compare
BWI76_RS26055 -1.6 -5.9 siroheme synthase compare
BWI76_RS11125 -1.6 -2.0 metal-dependent hydrolase compare
BWI76_RS01220 -1.6 -5.8 DNA-dependent helicase II compare
BWI76_RS04685 -1.6 -4.5 putative leucine operon leader peptide compare
BWI76_RS26775 -1.6 -3.7 endo-1,4-D-glucanase compare
BWI76_RS01870 -1.6 -5.4 diacylglycerol kinase compare
BWI76_RS17300 -1.6 -2.4 tRNA-Tyr compare
BWI76_RS21480 -1.5 -4.0 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BWI76_RS06535 -1.5 -4.3 endopeptidase La compare
BWI76_RS27430 -1.5 -1.1 (p)ppGpp synthetase compare
BWI76_RS18165 -1.5 -1.5 NUDIX pyrophosphatase compare
BWI76_RS20155 -1.5 -2.2 NADH-quinone oxidoreductase subunit I compare
BWI76_RS21370 -1.5 -2.4 ATP-dependent RNA helicase SrmB compare
BWI76_RS17365 -1.5 -8.7 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) compare
BWI76_RS26075 -1.4 -2.8 DNA adenine methylase compare
BWI76_RS17980 -1.4 -2.3 RNA chaperone ProQ compare
BWI76_RS06675 -1.4 -7.9 nickel/cobalt efflux protein RcnA compare
BWI76_RS15660 -1.4 -1.7 hypothetical protein compare
BWI76_RS21310 -1.4 -1.4 DNA repair protein RecO compare
BWI76_RS08180 -1.4 -6.6 asparagine synthase B compare
BWI76_RS12090 -1.4 -1.9 HNH endonuclease compare
BWI76_RS09030 -1.4 -4.9 transpeptidase compare
BWI76_RS08825 -1.4 -3.8 cyclic pyranopterin monophosphate synthase MoaC compare
BWI76_RS27915 -1.3 -2.5 YceK/YidQ family lipoprotein compare
BWI76_RS01540 -1.3 -1.9 thiamine biosynthesis protein ThiS compare
BWI76_RS26455 -1.3 -1.6 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS27165 -1.3 -4.0 mannitol-1-phosphate 5-dehydrogenase compare
BWI76_RS19375 -1.3 -2.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
BWI76_RS16755 -1.3 -3.6 acetoin reductase compare
BWI76_RS15680 -1.3 -4.4 hypothetical protein compare
BWI76_RS01550 -1.3 -3.9 thiamine phosphate synthase compare
BWI76_RS26390 -1.3 -2.9 cell division protein FtsX compare
BWI76_RS09635 -1.2 -1.6 amino acid ABC transporter ATP-binding protein compare
BWI76_RS01275 -1.2 -5.5 LysR family transcriptional regulator compare
BWI76_RS17370 -1.2 -1.9 nitrate transporter NasD compare
BWI76_RS12375 -1.2 -4.1 DNA-invertase hin compare
BWI76_RS08500 -1.2 -2.4 cytochrome d ubiquinol oxidase subunit 2 compare
BWI76_RS18770 -1.2 -1.5 DNA gyrase inhibitor compare
BWI76_RS26405 -1.2 -1.8 16S rRNA (guanine(966)-N(2))-methyltransferase compare
BWI76_RS19685 -1.2 -4.4 lysine transporter compare
BWI76_RS25960 -1.2 -3.5 NUDIX hydrolase compare
BWI76_RS14005 -1.2 -1.8 TetR family transcriptional regulator compare
BWI76_RS06595 -1.2 -2.0 hypothetical protein compare
BWI76_RS08520 -1.1 -1.2 colicin transporter TolQ compare
BWI76_RS06770 -1.1 -6.7 Hha toxicity attenuator compare
BWI76_RS19845 -1.1 -3.2 phosphatase compare
BWI76_RS06525 -1.1 -4.8 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS16000 -1.1 -1.6 multidrug transporter subunit MdtI compare
BWI76_RS15830 -1.1 -2.2 hypothetical protein compare
BWI76_RS15705 -1.1 -3.0 putative holin protein compare
BWI76_RS08655 -1.1 -1.5 molybdenum ABC transporter ATP-binding protein compare
BWI76_RS09655 -1.1 -3.4 leucine-responsive regulatory protein compare
BWI76_RS11190 -1.1 -2.3 putative TetR/AcrR family transcriptional regulatory protein compare
BWI76_RS24025 -1.1 -5.0 agmatinase compare
BWI76_RS20375 -1.0 -1.7 membrane protein compare
BWI76_RS15700 -1.0 -3.6 hypothetical protein compare
BWI76_RS15605 -1.0 -1.9 hypothetical protein compare
BWI76_RS16535 -1.0 -3.1 MATE family efflux transporter conserved
BWI76_RS06235 -1.0 -2.8 PAS domain-containing sensor histidine kinase compare
BWI76_RS24400 -1.0 -4.0 outer membrane channel protein TolC compare
BWI76_RS15840 -1.0 -2.6 prophage protein compare
BWI76_RS17380 -1.0 -2.7 nitrate transporter component compare
BWI76_RS08605 -1.0 -1.8 phosphoglyceromutase compare
BWI76_RS04530 -1.0 -1.1 peptidylprolyl isomerase SurA compare
BWI76_RS06830 -1.0 -4.2 recombination protein RecR compare
BWI76_RS16485 -1.0 -1.8 ribonuclease T compare
BWI76_RS11980 -1.0 -1.1 DeoR family transcriptional regulator compare
BWI76_RS08495 -1.0 -3.4 cytochrome bd-I ubiquinol oxidase subunit I compare
BWI76_RS22700 -1.0 -2.3 sulfate adenylyltransferase subunit 2 compare
BWI76_RS08980 -1.0 -1.2 DNA starvation/stationary phase protection protein compare
BWI76_RS01280 -1.0 -5.4 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase compare
BWI76_RS25425 -1.0 -1.0 arginine repressor compare
BWI76_RS15635 -1.0 -3.3 hypothetical protein compare
BWI76_RS25160 -0.9 -1.6 transcription elongation factor GreA compare
BWI76_RS01205 -0.9 -1.9 DUF484 family protein compare
BWI76_RS16090 -0.9 -2.0 two-component system response regulator DcuR compare
BWI76_RS23055 -0.9 -1.6 cobalamin biosynthesis protein CbiG compare
BWI76_RS10935 -0.9 -2.6 glucan biosynthesis glucosyltransferase H compare
BWI76_RS09190 -0.9 -2.9 hypothetical protein compare
BWI76_RS06765 -0.9 -2.3 transcriptional regulator compare


Specific Phenotypes

For 3 genes in this experiment

For supernatant Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted in Klebsiella michiganensis M5al

For supernatant Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted across organisms