Experiment set10IT059 for Pseudomonas fluorescens SBW25-INTG

Compare to:

Sucrose (C) and L-Glutamine (N); with MOPS; with PEG

200 most detrimental genes:

  gene name fitness t score description  
PFLU_RS02180 +1.6 3.0 thioredoxin TrxC compare
PFLU_RS13945 +1.4 3.0 hypothetical protein compare
PFLU_RS31290 +1.3 2.3 EamA family transporter compare
PFLU_RS11380 +1.3 1.6 sarcosine oxidase subunit delta compare
PFLU_RS18725 +1.2 2.2 alpha/beta hydrolase compare
PFLU_RS18615 +1.1 3.1 NADH-quinone oxidoreductase subunit A compare
PFLU_RS30390 +1.1 2.9 type III secretion system rspB compare
PFLU_RS20845 +1.0 1.9 hypothetical protein compare
PFLU_RS01875 +1.0 2.1 16S rRNA (uracil(1498)-N(3))-methyltransferase compare
PFLU_RS31755 +1.0 1.9 hypothetical protein compare
PFLU_RS18620 +1.0 4.3 NADH-quinone oxidoreductase subunit B compare
PFLU_RS14970 +1.0 2.6 alpha/beta hydrolase compare
PFLU_RS18670 +0.9 2.3 NADH-quinone oxidoreductase subunit M compare
PFLU_RS22725 +0.9 2.7 transcriptional regulator compare
PFLU_RS31275 +0.9 0.8 hypothetical protein compare
PFLU_RS12615 +0.9 2.4 oxidoreductase compare
PFLU_RS19050 +0.9 1.9 spore coat protein U domain-containing protein compare
PFLU_RS31830 +0.9 1.5 hypothetical protein compare
PFLU_RS10595 +0.8 1.9 hypothetical protein compare
PFLU_RS14760 +0.8 1.9 SDR family NAD(P)-dependent oxidoreductase compare
PFLU_RS24330 +0.8 4.8 phosphogluconate dehydratase compare
PFLU_RS08990 +0.8 2.3 hypothetical protein compare
PFLU_RS20970 +0.8 1.4 phytanoyl-CoA dioxygenase family protein compare
PFLU_RS05790 +0.8 3.2 hypothetical protein compare
PFLU_RS09620 +0.8 3.2 2-keto-4-pentenoate hydratase compare
PFLU_RS05105 +0.8 2.7 tetratricopeptide repeat protein compare
PFLU_RS31780 +0.8 1.3 hypothetical protein compare
PFLU_RS20015 +0.8 1.8 transporter compare
PFLU_RS20765 +0.8 2.1 hypothetical protein compare
PFLU_RS07665 +0.8 1.8 type I DNA topoisomerase compare
PFLU_RS31630 +0.8 1.8 hypothetical protein compare
PFLU_RS10835 +0.8 1.4 enoyl-CoA hydratase/isomerase family protein compare
PFLU_RS09535 +0.8 1.1 TIGR03750 family conjugal transfer protein compare
PFLU_RS14235 +0.7 3.2 iron transporter compare
PFLU_RS25925 +0.7 2.0 RnfH family protein compare
PFLU_RS10850 +0.7 3.4 IclR family transcriptional regulator compare
PFLU_RS03575 +0.7 1.5 hypothetical protein compare
PFLU_RS31490 +0.7 1.3 hypothetical protein compare
PFLU_RS25570 +0.7 2.1 OmpA family protein compare
PFLU_RS09315 +0.7 2.2 hypothetical protein compare
PFLU_RS15420 +0.7 2.9 hypothetical protein compare
PFLU_RS14045 +0.7 2.8 hypothetical protein compare
PFLU_RS20955 +0.7 1.0 DUF1028 domain-containing protein compare
PFLU_RS13120 +0.7 1.2 hypothetical protein compare
PFLU_RS13825 +0.7 1.5 hypothetical protein compare
PFLU_RS12660 +0.7 3.3 hypothetical protein compare
PFLU_RS13715 +0.7 1.2 MmcQ/YjbR family DNA-binding protein compare
PFLU_RS13205 +0.7 1.7 DUF883 family protein compare
PFLU_RS02215 +0.7 1.7 hypothetical protein compare
PFLU_RS18585 +0.7 1.0 high frequency lysogenization protein HflD compare
PFLU_RS13950 +0.7 1.4 hypothetical protein compare
PFLU_RS20335 +0.7 1.2 hypothetical protein compare
PFLU_RS15995 +0.7 2.0 TetR/AcrR family transcriptional regulator compare
PFLU_RS22365 +0.6 2.6 membrane protein compare
PFLU_RS08525 +0.6 2.6 glutathione peroxidase compare
PFLU_RS13975 +0.6 2.0 hypothetical protein compare
PFLU_RS02860 +0.6 1.4 urease subunit beta compare
PFLU_RS19470 +0.6 1.6 ABC transporter ATP-binding protein compare
PFLU_RS09500 +0.6 0.7 hypothetical protein compare
PFLU_RS08860 +0.6 1.2 2-hydroxy-3-oxopropionate reductase compare
PFLU_RS16960 +0.6 1.8 LysR family transcriptional regulator compare
PFLU_RS06810 +0.6 3.0 efflux RND transporter periplasmic adaptor subunit compare
PFLU_RS10995 +0.6 1.4 amino acid ABC transporter ATP-binding protein compare
PFLU_RS18025 +0.6 2.0 protein TolQ compare
PFLU_RS09670 +0.6 0.7 integrating conjugative element protein compare
PFLU_RS24680 +0.6 1.7 NIF3 1 compare
PFLU_RS14440 +0.6 0.9 hypothetical protein compare
PFLU_RS23595 +0.6 4.7 LacI family DNA-binding transcriptional regulator compare
PFLU_RS14680 +0.6 1.7 cbb3-type cytochrome c oxidase subunit 3 compare
PFLU_RS30590 +0.6 0.9 hypothetical protein compare
PFLU_RS05060 +0.6 2.1 GIY-YIG nuclease family protein compare
PFLU_RS08350 +0.6 1.2 ABC transporter ATP-binding protein compare
PFLU_RS14425 +0.6 2.8 AraC family transcriptional regulator compare
PFLU_RS31800 +0.6 1.0 hypothetical protein compare
PFLU_RS20080 +0.6 2.4 fumarylacetoacetate hydrolase family protein compare
PFLU_RS06710 +0.6 3.1 hypothetical protein compare
PFLU_RS14980 +0.6 2.3 RidA family protein compare
PFLU_RS11505 +0.6 1.2 ABC transporter substrate-binding protein compare
PFLU_RS13850 +0.6 1.5 hypothetical protein compare
PFLU_RS30795 +0.6 2.5 tail fiber domain-containing protein compare
PFLU_RS19040 +0.6 2.3 spore coat protein U domain-containing protein compare
PFLU_RS24015 +0.6 1.2 cold-shock protein compare
PFLU_RS02185 +0.6 2.7 type II toxin-antitoxin system HigB family toxin compare
PFLU_RS18640 +0.6 2.3 NADH-quinone oxidoreductase subunit NuoG compare
PFLU_RS09575 +0.6 1.8 FadR family transcriptional regulator compare
PFLU_RS10485 +0.6 2.0 hypothetical protein compare
PFLU_RS19590 +0.5 1.6 pyridoxamine 5'-phosphate oxidase compare
PFLU_RS12175 +0.5 1.1 methyl-accepting chemotaxis protein compare
PFLU_RS23475 +0.5 1.1 peptidase M4 compare
PFLU_RS04200 +0.5 4.0 cytochrome bc complex cytochrome b subunit compare
PFLU_RS23460 +0.5 0.9 antibiotic biosynthesis monooxygenase compare
PFLU_RS08545 +0.5 1.3 GAF domain-containing protein compare
PFLU_RS07520 +0.5 0.7 hypothetical protein compare
PFLU_RS08060 +0.5 2.0 YciK family oxidoreductase compare
PFLU_RS12455 +0.5 2.8 N(5)-hydroxyornithine transformylase PvdF compare
PFLU_RS04565 +0.5 0.9 TMEM165/GDT1 family protein compare
PFLU_RS12040 +0.5 2.4 divalent metal cation transporter compare
PFLU_RS23700 +0.5 2.2 PA2169 family four-helix-bundle protein compare
PFLU_RS28735 +0.5 2.2 thiol-disulfide isomerase compare
PFLU_RS24340 +0.5 1.7 sigma-70 family RNA polymerase sigma factor compare
PFLU_RS19930 +0.5 1.5 type II secretion system protein GspG compare
PFLU_RS06650 +0.5 1.5 DUF2288 domain-containing protein compare
PFLU_RS04795 +0.5 2.4 GNAT family N-acetyltransferase compare
PFLU_RS14990 +0.5 1.2 helix-turn-helix transcriptional regulator compare
PFLU_RS19790 +0.5 2.6 haloacid dehalogenase type II compare
PFLU_RS09870 +0.5 3.8 hypothetical protein compare
PFLU_RS08850 +0.5 2.3 pyruvate kinase compare
PFLU_RS09505 +0.5 1.3 HU family DNA-binding protein compare
PFLU_RS20750 +0.5 2.1 nucleotidyltransferase family protein compare
PFLU_RS30880 +0.5 1.5 type VI secretion system baseplate subunit TssE compare
PFLU_RS19390 +0.5 2.5 ornithine cyclodeaminase compare
PFLU_RS18655 +0.5 1.2 NADH-quinone oxidoreductase subunit J compare
PFLU_RS18805 +0.5 0.9 ABC transporter ATP-binding protein compare
PFLU_RS26500 +0.5 2.4 Lrp/AsnC family transcriptional regulator compare
PFLU_RS21035 +0.5 1.8 SDR family oxidoreductase compare
PFLU_RS18645 +0.5 1.0 NADH-quinone oxidoreductase subunit NuoH compare
PFLU_RS28340 +0.5 1.3 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR compare
PFLU_RS19805 +0.5 0.9 LysR family transcriptional regulator compare
PFLU_RS31375 +0.5 1.9 hypothetical protein compare
PFLU_RS14420 +0.5 1.0 chemotactic transduction protein ChpE compare
PFLU_RS26950 +0.5 2.8 outer membrane beta-barrel protein compare
PFLU_RS04785 +0.5 1.9 ABC transporter substrate-binding protein compare
PFLU_RS02820 +0.5 2.1 AraC family transcriptional regulator compare
PFLU_RS01850 +0.5 2.7 transporter substrate-binding domain-containing protein compare
PFLU_RS03570 +0.4 0.8 hypothetical protein compare
PFLU_RS14790 +0.4 2.3 HPP family protein compare
PFLU_RS16690 +0.4 1.4 ABC transporter ATP-binding protein compare
PFLU_RS27690 +0.4 0.8 response regulator compare
PFLU_RS17370 +0.4 1.4 hypothetical protein compare
PFLU_RS10880 +0.4 2.1 LLM class flavin-dependent oxidoreductase compare
PFLU_RS12650 +0.4 1.1 hypothetical protein compare
PFLU_RS07780 +0.4 0.7 hypothetical protein compare
PFLU_RS30670 +0.4 1.3 DUF4102 domain-containing protein compare
PFLU_RS24635 +0.4 2.1 L,D-transpeptidase family protein compare
PFLU_RS13415 +0.4 2.5 glycosyltransferase compare
PFLU_RS14560 +0.4 1.2 DNA-binding protein compare
PFLU_RS16565 +0.4 1.4 hypothetical protein compare
PFLU_RS15005 +0.4 0.9 hypothetical protein compare
PFLU_RS05890 +0.4 0.4 recombination regulator RecX compare
PFLU_RS28285 +0.4 1.3 hypothetical protein compare
PFLU_RS12850 +0.4 1.6 sigma-54-dependent Fis family transcriptional regulator compare
PFLU_RS20390 +0.4 0.6 DUF1654 domain-containing protein compare
PFLU_RS08575 +0.4 0.7 hypothetical protein compare
PFLU_RS13995 +0.4 1.7 hypothetical protein compare
PFLU_RS25145 +0.4 1.8 type II toxin-antitoxin system RelE/ParE family toxin compare
PFLU_RS17915 +0.4 2.1 glycosyltransferase family 4 protein compare
PFLU_RS00520 +0.4 1.2 DUF2388 domain-containing protein compare
PFLU_RS05040 +0.4 1.5 DUF1120 domain-containing protein compare
PFLU_RS15900 +0.4 1.7 hypothetical protein compare
PFLU_RS30770 +0.4 0.8 thioredoxin family protein compare
PFLU_RS13045 +0.4 1.6 AAA domain-containing protein compare
PFLU_RS27640 +0.4 0.8 alpha/beta fold hydrolase compare
PFLU_RS10480 +0.4 1.9 hypothetical protein compare
PFLU_RS11670 +0.4 1.4 SDR family oxidoreductase compare
PFLU_RS04150 +0.4 1.9 DUF1043 family protein compare
PFLU_RS17545 +0.4 0.5 DUF465 domain-containing protein compare
PFLU_RS12425 +0.4 1.9 type II toxin-antitoxin system HicB family antitoxin compare
PFLU_RS12725 +0.4 0.8 GNAT family N-acetyltransferase compare
PFLU_RS31470 +0.4 1.4 hypothetical protein compare
PFLU_RS10135 +0.4 1.3 hypothetical protein compare
PFLU_RS15150 +0.4 1.8 PAS domain S-box protein compare
PFLU_RS09350 +0.4 1.6 hypothetical protein compare
PFLU_RS17615 +0.4 0.8 DeoR/GlpR transcriptional regulator compare
PFLU_RS16155 +0.4 1.3 phosphate ABC transporter ATP-binding protein compare
PFLU_RS20245 +0.4 2.0 DUF2313 domain-containing protein compare
PFLU_RS11350 +0.4 1.4 LLM class flavin-dependent oxidoreductase compare
PFLU_RS19515 +0.4 1.5 sugar ABC transporter ATP-binding protein compare
PFLU_RS30475 +0.4 1.9 hypothetical protein compare
PFLU_RS02115 +0.4 0.9 outer membrane lipoprotein carrier protein LolA compare
PFLU_RS19720 +0.4 1.0 hypothetical protein compare
PFLU_RS16840 +0.4 1.0 DUF2834 domain-containing protein compare
PFLU_RS00455 +0.4 2.1 hypothetical protein compare
PFLU_RS13915 +0.4 1.9 hypothetical protein compare
PFLU_RS13765 +0.4 0.6 hypothetical protein compare
PFLU_RS28660 +0.4 1.8 DUF2269 family protein compare
PFLU_RS29090 +0.4 2.0 exopolyphosphatase compare
PFLU_RS22845 +0.4 2.0 acetyl-CoA C-acetyltransferase compare
PFLU_RS13910 +0.4 1.8 hypothetical protein compare
PFLU_RS15575 +0.4 1.6 fumarylacetoacetate hydrolase family protein compare
PFLU_RS01790 +0.4 1.5 proline/glycine betaine ABC transporter permease compare
PFLU_RS10705 +0.4 1.0 GNAT family N-acetyltransferase compare
PFLU_RS03535 +0.4 0.8 YscO family type III secretion system apparatus protein compare
PFLU_RS02925 +0.4 1.7 ABC transporter ATP-binding protein compare
PFLU_RS22335 +0.4 2.3 cytochrome-c oxidase, cbb3-type subunit III compare
PFLU_RS06520 +0.4 2.3 hypothetical protein compare
PFLU_RS05640 +0.4 2.1 amino acid ABC transporter permease compare
PFLU_RS15515 +0.4 1.1 hypothetical protein compare
PFLU_RS13350 +0.4 0.3 ParD-like family protein compare
PFLU_RS31005 +0.4 1.6 tyrosine-type recombinase/integrase compare
PFLU_RS20875 +0.4 1.9 hypothetical protein compare
PFLU_RS16145 +0.4 1.3 hypothetical protein compare
PFLU_RS11980 +0.4 1.5 precorrin-6A synthase (deacetylating) compare
PFLU_RS16285 +0.4 1.1 hypothetical protein compare
PFLU_RS19325 +0.4 1.6 DASS family sodium-coupled anion symporter compare
PFLU_RS14130 +0.4 1.3 hypothetical protein compare
PFLU_RS13965 +0.4 1.0 hypothetical protein compare
PFLU_RS23445 +0.4 0.8 DUF1003 domain-containing protein compare
PFLU_RS24300 +0.4 1.1 hypothetical protein compare
PFLU_RS17570 +0.4 1.4 DNA polymerase Y family protein compare
PFLU_RS11895 +0.4 1.7 type II secretion system ATPase GspE compare


Specific Phenotypes

For 1 genes in this experiment

For stress Sucrose in Pseudomonas fluorescens SBW25-INTG

For stress Sucrose across organisms