Experiment set10IT058 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x

200 most important genes:

  gene name fitness t score description  
BWI76_RS01210 -5.3 -6.0 tyrosine recombinase XerC compare
BWI76_RS09660 -5.0 -3.5 DNA translocase FtsK compare
BWI76_RS23240 -5.0 -3.4 exonuclease V subunit gamma compare
BWI76_RS18950 -5.0 -6.7 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS23360 -4.8 -5.7 diaminopimelate decarboxylase compare
BWI76_RS05015 -4.7 -4.3 transcriptional regulator compare
BWI76_RS26085 -4.4 -3.8 3-dehydroquinate synthase compare
BWI76_RS18930 -4.3 -5.8 histidinol-phosphate transaminase compare
BWI76_RS18925 -4.3 -9.4 histidinol dehydrogenase compare
BWI76_RS25230 -4.0 -7.8 phospholipid ABC transporter ATP-binding protein MlaF compare
BWI76_RS23230 -4.0 -4.7 exodeoxyribonuclease V subunit beta compare
BWI76_RS24400 -4.0 -7.5 outer membrane channel protein TolC compare
BWI76_RS09755 -3.8 -7.3 phosphoserine transaminase compare
BWI76_RS11840 -3.8 -6.7 tryptophan synthase subunit alpha compare
BWI76_RS09635 -3.8 -3.6 amino acid ABC transporter ATP-binding protein compare
BWI76_RS09760 -3.8 -6.3 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS18940 -3.8 -4.4 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS21475 -3.7 -6.0 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS09970 -3.6 -8.8 porin OmpA compare
BWI76_RS18955 -3.6 -7.8 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS07070 -3.5 -4.4 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS07065 -3.5 -8.8 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS01325 -3.5 -4.7 twin-arginine translocase subunit TatB compare
BWI76_RS04470 -3.5 -9.2 carbamoyl phosphate synthase large subunit compare
BWI76_RS25215 -3.5 -8.2 phospholipid-binding protein MlaC compare
BWI76_RS09640 -3.5 -4.8 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS20350 -3.4 -7.3 amidophosphoribosyltransferase compare
BWI76_RS18935 -3.4 -8.4 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS04465 -3.3 -5.3 carbamoyl-phosphate synthase small subunit compare
BWI76_RS04255 -3.3 -10.4 threonine synthase compare
BWI76_RS25225 -3.3 -6.6 ABC transporter permease compare
BWI76_RS20895 -3.2 -5.5 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS18135 -3.2 -7.6 zinc ABC transporter ATP-binding protein ZnuC compare
BWI76_RS00855 -3.2 -9.2 argininosuccinate lyase compare
BWI76_RS20355 -3.1 -4.5 colicin V production protein compare
BWI76_RS06780 -3.1 -9.2 MexE family multidrug efflux RND transporter periplasmic adaptor subunit compare
BWI76_RS04670 -3.1 -11.4 3-isopropylmalate dehydratase large subunit compare
BWI76_RS01615 -3.1 -10.7 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS21070 -3.1 -3.2 outer membrane protein assembly factor BamB compare
BWI76_RS18920 -3.0 -2.9 ATP phosphoribosyltransferase compare
BWI76_RS01610 -3.0 -8.2 phosphoribosylamine--glycine ligase compare
BWI76_RS03010 -2.9 -8.3 ornithine carbamoyltransferase compare
BWI76_RS18140 -2.9 -4.8 zinc ABC transporter permease compare
BWI76_RS23365 -2.9 -8.6 LysR family transcriptional regulator compare
BWI76_RS02995 -2.9 -10.0 aspartate carbamoyltransferase compare
BWI76_RS23920 -2.9 -5.8 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS04675 -2.8 -8.4 3-isopropylmalate dehydrogenase compare
BWI76_RS04530 -2.8 -1.9 peptidylprolyl isomerase SurA compare
BWI76_RS20965 -2.8 -6.4 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS04250 -2.8 -9.4 homoserine kinase compare
BWI76_RS06775 -2.8 -12.8 multidrug efflux RND transporter permease subunit compare
BWI76_RS26570 -2.8 -3.7 anion permease compare
BWI76_RS04160 -2.7 -7.2 phosphoserine phosphatase compare
BWI76_RS04645 -2.6 -7.6 3-dehydroquinase compare
BWI76_RS04665 -2.5 -16.6 3-isopropylmalate dehydratase small subunit compare
BWI76_RS00805 -2.5 -4.9 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS21265 -2.5 -14.9 phosphoribosylformylglycinamidine synthase compare
BWI76_RS00835 -2.5 -12.0 phosphoenolpyruvate carboxylase compare
BWI76_RS00240 -2.5 -2.9 FMN-binding protein MioC compare
BWI76_RS04245 -2.5 -14.6 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS11855 -2.5 -9.5 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS11860 -2.5 -8.4 anthranilate synthase component I compare
BWI76_RS05835 -2.4 -3.6 gamma-glutamyl-phosphate reductase compare
BWI76_RS04715 -2.4 -3.7 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS00400 -2.4 -2.2 glutamine synthetase compare
BWI76_RS07730 -2.4 -2.2 iron-enterobactin transporter membrane protein compare
BWI76_RS08385 -2.4 -4.2 citrate (Si)-synthase compare
BWI76_RS08495 -2.3 -6.0 cytochrome bd-I ubiquinol oxidase subunit I compare
BWI76_RS08500 -2.3 -4.1 cytochrome d ubiquinol oxidase subunit 2 compare
BWI76_RS20435 -2.3 -2.6 chorismate synthase compare
BWI76_RS21370 -2.3 -2.8 ATP-dependent RNA helicase SrmB compare
BWI76_RS27430 -2.3 -2.1 (p)ppGpp synthetase compare
BWI76_RS04685 -2.3 -9.2 putative leucine operon leader peptide compare
BWI76_RS24285 -2.3 -9.1 cystathionine beta-lyase compare
BWI76_RS15660 -2.3 -2.4 hypothetical protein compare
BWI76_RS20475 -2.3 -5.3 phospholipid-binding lipoprotein MlaA compare
BWI76_RS25115 -2.3 -6.7 argininosuccinate synthase compare
BWI76_RS00845 -2.3 -10.6 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS11850 -2.2 -9.6 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS11965 -2.2 -5.1 orotidine-5'-phosphate decarboxylase compare
BWI76_RS25220 -2.2 -2.5 outer membrane lipid asymmetry maintenance protein MlaD compare
BWI76_RS27310 -2.2 -9.2 glycosyltransferase compare
BWI76_RS00975 -2.2 -11.0 dihydroxy-acid dehydratase compare
BWI76_RS00850 -2.2 -11.2 acetylglutamate kinase compare
BWI76_RS15115 -2.2 -8.5 MFS transporter compare
BWI76_RS26200 -2.2 -8.4 starch synthase compare
BWI76_RS00980 -2.1 -9.9 PLP-dependent threonine dehydratase compare
BWI76_RS04240 -2.1 -3.8 thr operon leader peptide compare
BWI76_RS11300 -2.1 -2.1 cupin compare
BWI76_RS18130 -2.0 -3.6 zinc ABC transporter substrate-binding protein compare
BWI76_RS06740 -2.0 -4.4 50S ribosomal protein L36 compare
BWI76_RS05840 -2.0 -6.3 glutamate 5-kinase compare
BWI76_RS00990 -2.0 -9.3 ketol-acid reductoisomerase compare
BWI76_RS26395 -1.9 -2.8 cell division protein FtsE compare
BWI76_RS26075 -1.9 -4.5 DNA adenine methylase compare
BWI76_RS09190 -1.9 -4.9 hypothetical protein compare
BWI76_RS00785 -1.8 -4.6 cystathionine gamma-synthase compare
BWI76_RS17290 -1.8 -4.7 formyltetrahydrofolate deformylase compare
BWI76_RS04680 -1.8 -7.8 2-isopropylmalate synthase compare
BWI76_RS00960 -1.8 -6.1 acetolactate synthase 2 catalytic subunit compare
BWI76_RS19805 -1.7 -5.1 Bcr/CflA family multidrug efflux MFS transporter compare
BWI76_RS17190 -1.7 -2.1 TonB system transport protein TonB compare
BWI76_RS25600 -1.7 -1.3 tRNA-Thr compare
BWI76_RS25645 -1.7 -5.6 shikimate dehydrogenase compare
BWI76_RS21465 -1.7 -4.3 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS26620 -1.7 -1.5 Fe-S biogenesis protein NfuA compare
BWI76_RS27385 -1.7 -6.4 orotate phosphoribosyltransferase compare
BWI76_RS22755 -1.7 -6.7 phosphoadenosine phosphosulfate reductase compare
BWI76_RS23220 -1.7 -6.0 amino-acid N-acetyltransferase compare
BWI76_RS27390 -1.6 -4.9 ribonuclease PH compare
BWI76_RS25335 -1.6 -4.6 stringent starvation protein A compare
BWI76_RS21580 -1.6 -2.5 SsrA-binding protein compare
BWI76_RS07740 -1.6 -2.3 Fe2+-enterobactin ABC transporter substrate-binding protein compare
BWI76_RS01795 -1.6 -4.9 hypothetical protein compare
BWI76_RS00345 -1.6 -3.6 protein disulfide oxidoreductase DsbA compare
BWI76_RS26460 -1.6 -4.7 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS21480 -1.6 -5.1 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BWI76_RS26670 -1.5 -6.5 two-component sensor histidine kinase compare
BWI76_RS09910 -1.5 -10.7 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS16990 -1.5 -5.5 ABC transporter ATP-binding protein compare
BWI76_RS01655 -1.5 -6.4 homoserine O-succinyltransferase compare
BWI76_RS15835 -1.5 -1.0 hypothetical protein compare
BWI76_RS06770 -1.4 -9.4 Hha toxicity attenuator compare
BWI76_RS09645 -1.4 -2.2 thioredoxin-disulfide reductase compare
BWI76_RS27290 -1.4 -8.1 hypothetical protein compare
BWI76_RS09655 -1.4 -4.0 leucine-responsive regulatory protein compare
BWI76_RS22095 -1.4 -3.8 multidrug export protein EmrA compare
BWI76_RS11845 -1.4 -2.7 tryptophan synthase subunit beta compare
BWI76_RS21000 -1.4 -6.0 exopolyphosphatase compare
BWI76_RS07725 -1.4 -1.1 iron-enterobactin transporter permease compare
BWI76_RS26000 -1.4 -6.5 aspartate aminotransferase family protein compare
BWI76_RS00720 -1.4 -2.0 DNA-binding response regulator compare
BWI76_RS26405 -1.4 -2.0 16S rRNA (guanine(966)-N(2))-methyltransferase compare
BWI76_RS08525 -1.4 -4.4 colicin transporter compare
BWI76_RS23930 -1.4 -6.8 transcriptional regulator ArgP compare
BWI76_RS15110 -1.4 -10.0 putative excinuclease ABC subunit A compare
BWI76_RS23140 -1.3 -2.3 carboxysome shell protein compare
BWI76_RS02815 -1.3 -2.4 fructose-bisphosphatase class I compare
BWI76_RS01200 -1.3 -2.0 diaminopimelate epimerase compare
BWI76_RS14305 -1.3 -4.7 metallophosphoesterase compare
BWI76_RS05200 -1.3 -2.3 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS03045 -1.3 -1.6 hypothetical protein compare
BWI76_RS11980 -1.3 -2.4 DeoR family transcriptional regulator compare
BWI76_RS21350 -1.3 -1.8 anti-RNA polymerase sigma factor SigE compare
BWI76_RS21395 -1.3 -3.3 DTW domain-containing protein compare
BWI76_RS26390 -1.3 -5.2 cell division protein FtsX compare
BWI76_RS27440 -1.3 -3.3 DNA helicase RecG compare
BWI76_RS17400 -1.3 -1.7 transporter compare
BWI76_RS12950 -1.3 -3.1 acriflavin resistance protein AcrA compare
BWI76_RS09650 -1.3 -4.6 hypothetical protein compare
BWI76_RS13560 -1.3 -1.5 amino acid ABC transporter substrate-binding subunit compare
BWI76_RS20440 -1.2 -1.5 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS16965 -1.2 -3.8 murein lipoprotein compare
BWI76_RS00965 -1.2 -1.2 acetolactate synthase 2 small subunit compare
BWI76_RS15825 -1.2 -2.4 hypothetical protein compare
BWI76_RS19685 -1.2 -5.3 lysine transporter compare
BWI76_RS23480 -1.2 -7.1 EAL domain-containing protein compare
BWI76_RS24960 -1.2 -3.1 N-acetyltransferase compare
BWI76_RS21450 -1.2 -2.5 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS18770 -1.2 -1.6 DNA gyrase inhibitor compare
BWI76_RS12090 -1.2 -1.1 HNH endonuclease compare
BWI76_RS24280 -1.2 -4.7 biopolymer transporter ExbB compare
BWI76_RS23265 -1.2 -3.1 hypothetical protein compare
BWI76_RS16215 -1.2 -4.9 hypothetical protein compare
BWI76_RS01790 -1.2 -6.8 lysine-sensitive aspartokinase 3 compare
BWI76_RS11275 -1.2 -6.2 sensor protein PhoQ compare
BWI76_RS05140 -1.2 -3.7 Fe3+-hydroxamate ABC transporter permease FhuB conserved
BWI76_RS11150 -1.2 -2.3 membrane protein compare
BWI76_RS16895 -1.1 -2.0 3-(3-hydroxy-phenyl)propionate transporter MhpT compare
BWI76_RS13645 -1.1 -2.2 N-hydroxyarylamine O-acetyltransferase compare
BWI76_RS27505 -1.1 -2.5 septal ring assembly protein ZapB compare
BWI76_RS19845 -1.1 -3.3 phosphatase compare
BWI76_RS01925 -1.1 -6.5 aromatic amino acid aminotransferase compare
BWI76_RS26455 -1.1 -2.9 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS17860 -1.1 -2.3 YoaH family protein compare
BWI76_RS01220 -1.1 -5.8 DNA-dependent helicase II compare
BWI76_RS15810 -1.1 -4.4 hypothetical protein compare
BWI76_RS01085 -1.1 -5.0 polysaccharide chain length modulation protein compare
BWI76_RS09870 -1.1 -6.3 aromatic amino acid aminotransferase compare
BWI76_RS15215 -1.1 -1.4 N-acetyltransferase compare
BWI76_RS19035 -1.1 -4.3 dTDP-rhamnosyl transferase compare
BWI76_RS24885 -1.1 -1.9 PTS galactitol transporter subunit IIB compare
BWI76_RS19765 -1.1 -5.7 membrane protein compare
BWI76_RS24275 -1.1 -2.1 biopolymer transport protein ExbD compare
BWI76_RS06765 -1.1 -2.6 transcriptional regulator compare
BWI76_RS05555 -1.1 -1.3 Crl family RNA polymerase assembly factor compare
BWI76_RS00760 -1.1 -2.4 cell division protein FtsN compare
BWI76_RS27680 -1.1 -3.2 TetR family transcriptional regulator compare
BWI76_RS05125 -1.1 -6.2 ferrichrome porin FhuA compare
BWI76_RS15650 -1.1 -2.7 gp5 compare
BWI76_RS05135 -1.1 -1.4 iron-hydroxamate transporter substrate-binding subunit compare
BWI76_RS10990 -1.0 -2.7 dihydroorotase compare
BWI76_RS15850 -1.0 -3.2 DUF1317 domain-containing protein compare
BWI76_RS19010 -1.0 -2.7 polysaccharide pyruvyl transferase yvff compare
BWI76_RS09030 -1.0 -4.0 transpeptidase compare
BWI76_RS01330 -1.0 -2.4 twin-arginine translocase subunit TatC compare
BWI76_RS15565 -1.0 -4.4 hypothetical protein compare
BWI76_RS24600 -1.0 -2.8 dihydroxyacetone kinase compare
BWI76_RS01115 -1.0 -2.9 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS04100 -1.0 -3.2 peptide chain release factor 3 compare


Specific Phenotypes

For 3 genes in this experiment

For supernatant Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted in Klebsiella michiganensis M5al

For supernatant Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted across organisms