Experiment set10IT056 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x

200 most important genes:

  gene name fitness t score description  
BWI76_RS15660 -4.3 -1.3 hypothetical protein compare
BWI76_RS01210 -4.3 -3.5 tyrosine recombinase XerC compare
BWI76_RS23360 -4.2 -3.6 diaminopimelate decarboxylase compare
BWI76_RS09755 -4.0 -7.6 phosphoserine transaminase compare
BWI76_RS21475 -3.9 -5.8 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS09760 -3.8 -7.2 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS09660 -3.7 -2.4 DNA translocase FtsK compare
BWI76_RS11235 -3.6 -1.1 hypothetical protein compare
BWI76_RS25335 -3.5 -3.0 stringent starvation protein A compare
BWI76_RS18940 -3.5 -4.6 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS23240 -3.4 -3.3 exonuclease V subunit gamma compare
BWI76_RS00965 -3.3 -1.0 acetolactate synthase 2 small subunit compare
BWI76_RS20895 -3.3 -4.2 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS20355 -3.3 -2.1 colicin V production protein compare
BWI76_RS26570 -3.1 -2.1 anion permease compare
BWI76_RS25115 -3.1 -7.6 argininosuccinate synthase compare
BWI76_RS04305 -3.0 -0.9 molecular chaperone DnaJ compare
BWI76_RS04160 -3.0 -5.6 phosphoserine phosphatase compare
BWI76_RS25225 -2.9 -5.2 ABC transporter permease compare
BWI76_RS18950 -2.9 -3.1 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS24400 -2.9 -5.5 outer membrane channel protein TolC compare
BWI76_RS25230 -2.9 -7.3 phospholipid ABC transporter ATP-binding protein MlaF compare
BWI76_RS04465 -2.8 -4.3 carbamoyl-phosphate synthase small subunit compare
BWI76_RS04470 -2.8 -8.8 carbamoyl phosphate synthase large subunit compare
BWI76_RS25215 -2.7 -4.6 phospholipid-binding protein MlaC compare
BWI76_RS04645 -2.7 -5.7 3-dehydroquinase compare
BWI76_RS25220 -2.7 -2.6 outer membrane lipid asymmetry maintenance protein MlaD compare
BWI76_RS01325 -2.6 -2.5 twin-arginine translocase subunit TatB compare
BWI76_RS23230 -2.5 -3.0 exodeoxyribonuclease V subunit beta compare
BWI76_RS07070 -2.5 -4.5 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS05200 -2.5 -1.7 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS04715 -2.5 -2.1 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS18925 -2.4 -4.8 histidinol dehydrogenase compare
BWI76_RS23920 -2.3 -4.0 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS26085 -2.3 -1.7 3-dehydroquinate synthase compare
BWI76_RS00855 -2.3 -5.9 argininosuccinate lyase compare
BWI76_RS25960 -2.3 -3.9 NUDIX hydrolase compare
BWI76_RS20965 -2.3 -3.1 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS07740 -2.3 -1.3 Fe2+-enterobactin ABC transporter substrate-binding protein compare
BWI76_RS19495 -2.2 -0.9 ABC transporter, quaternary amine uptake transporter (QAT) family, ATP-binding protein compare
BWI76_RS06770 -2.2 -7.6 Hha toxicity attenuator compare
BWI76_RS27310 -2.2 -7.2 glycosyltransferase compare
BWI76_RS05840 -2.2 -5.0 glutamate 5-kinase compare
BWI76_RS26665 -2.2 -2.3 DNA-binding response regulator compare
BWI76_RS18935 -2.2 -5.1 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS21070 -2.2 -1.8 outer membrane protein assembly factor BamB compare
BWI76_RS03010 -2.2 -8.4 ornithine carbamoyltransferase compare
BWI76_RS01615 -2.2 -6.0 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS19770 -2.1 -1.5 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS07730 -2.1 -1.1 iron-enterobactin transporter membrane protein compare
BWI76_RS20350 -2.1 -4.5 amidophosphoribosyltransferase compare
BWI76_RS23220 -2.1 -6.8 amino-acid N-acetyltransferase compare
BWI76_RS21165 -2.1 -1.2 Fe-S cluster assembly transcriptional regulator IscR compare
BWI76_RS05835 -2.1 -2.4 gamma-glutamyl-phosphate reductase compare
BWI76_RS01330 -2.1 -2.8 twin-arginine translocase subunit TatC compare
BWI76_RS06775 -2.1 -9.1 multidrug efflux RND transporter permease subunit compare
BWI76_RS23480 -2.1 -6.4 EAL domain-containing protein compare
BWI76_RS04255 -2.0 -7.6 threonine synthase compare
BWI76_RS02410 -2.0 -1.4 EF-P beta-lysylation protein EpmB compare
BWI76_RS08495 -2.0 -5.4 cytochrome bd-I ubiquinol oxidase subunit I compare
BWI76_RS24600 -2.0 -3.6 dihydroxyacetone kinase compare
BWI76_RS07065 -2.0 -6.2 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS00345 -2.0 -2.7 protein disulfide oxidoreductase DsbA compare
BWI76_RS26395 -2.0 -4.2 cell division protein FtsE compare
BWI76_RS26670 -2.0 -7.3 two-component sensor histidine kinase compare
BWI76_RS04955 -2.0 -1.6 hypoxanthine phosphoribosyltransferase compare
BWI76_RS21465 -2.0 -3.5 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS00400 -2.0 -1.0 glutamine synthetase compare
BWI76_RS11700 -1.9 -1.0 hypothetical protein compare
BWI76_RS00835 -1.9 -7.6 phosphoenolpyruvate carboxylase compare
BWI76_RS16215 -1.9 -3.8 hypothetical protein compare
BWI76_RS24885 -1.9 -1.5 PTS galactitol transporter subunit IIB compare
BWI76_RS18955 -1.8 -4.8 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS05810 -1.8 -0.9 hypothetical protein compare
BWI76_RS21265 -1.8 -9.9 phosphoribosylformylglycinamidine synthase compare
BWI76_RS18815 -1.8 -2.5 nitrogenase molybdenum-iron protein alpha chain compare
BWI76_RS22205 -1.8 -2.0 cation ABC transporter ATP-binding protein compare
BWI76_RS09640 -1.8 -2.4 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS19805 -1.8 -2.5 Bcr/CflA family multidrug efflux MFS transporter compare
BWI76_RS23365 -1.8 -4.9 LysR family transcriptional regulator compare
BWI76_RS06765 -1.8 -2.8 transcriptional regulator compare
BWI76_RS20475 -1.8 -2.7 phospholipid-binding lipoprotein MlaA compare
BWI76_RS01610 -1.8 -5.6 phosphoribosylamine--glycine ligase compare
BWI76_RS18130 -1.8 -1.9 zinc ABC transporter substrate-binding protein compare
BWI76_RS04685 -1.7 -7.7 putative leucine operon leader peptide compare
BWI76_RS15835 -1.7 -1.2 hypothetical protein compare
BWI76_RS10700 -1.7 -2.6 XRE family transcriptional regulator compare
BWI76_RS00845 -1.7 -5.5 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS16975 -1.7 -3.1 cysteine desufuration protein SufE compare
BWI76_RS09655 -1.7 -2.4 leucine-responsive regulatory protein compare
BWI76_RS02320 -1.7 -3.0 divalent ion tolerance protein CutA compare
BWI76_RS08525 -1.6 -3.0 colicin transporter compare
BWI76_RS06780 -1.6 -4.9 MexE family multidrug efflux RND transporter periplasmic adaptor subunit compare
BWI76_RS00850 -1.6 -6.2 acetylglutamate kinase compare
BWI76_RS20795 -1.6 -0.9 ethanolamine catabolic microcompartment shell protein EutN compare
BWI76_RS00975 -1.6 -6.9 dihydroxy-acid dehydratase compare
BWI76_RS26150 -1.6 -2.2 molecular chaperone Hsp33 compare
BWI76_RS27305 -1.6 -4.9 glycosyl transferase compare
BWI76_RS16490 -1.6 -1.3 glutaredoxin compare
BWI76_RS06800 -1.6 -0.8 DUF2496 domain-containing protein compare
BWI76_RS12070 -1.6 -0.9 hypothetical protein compare
BWI76_RS26390 -1.6 -3.0 cell division protein FtsX compare
BWI76_RS16990 -1.6 -2.4 ABC transporter ATP-binding protein compare
BWI76_RS04250 -1.6 -4.4 homoserine kinase compare
BWI76_RS18930 -1.6 -2.5 histidinol-phosphate transaminase compare
BWI76_RS08345 -1.5 -1.9 Nif3-like dinuclear metal center protein compare
BWI76_RS15290 -1.5 -1.0 transcriptional regulator compare
BWI76_RS26075 -1.5 -3.1 DNA adenine methylase compare
BWI76_RS14670 -1.5 -1.4 hypothetical protein compare
BWI76_RS19375 -1.5 -1.2 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
BWI76_RS00760 -1.5 -2.8 cell division protein FtsN compare
BWI76_RS15810 -1.5 -4.0 hypothetical protein compare
BWI76_RS12340 -1.5 -3.5 molecular chaperone Tir compare
BWI76_RS26620 -1.5 -0.7 Fe-S biogenesis protein NfuA compare
BWI76_RS00720 -1.4 -1.8 DNA-binding response regulator compare
BWI76_RS26460 -1.4 -4.2 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS09970 -1.4 -3.4 porin OmpA compare
BWI76_RS20375 -1.4 -1.3 membrane protein compare
BWI76_RS04240 -1.4 -1.3 thr operon leader peptide compare
BWI76_RS00805 -1.4 -2.8 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS18780 -1.4 -1.4 D-alanyl-D-alanine carboxypeptidase compare
BWI76_RS17190 -1.4 -1.7 TonB system transport protein TonB compare
BWI76_RS13980 -1.4 -1.1 hypothetical protein compare
BWI76_RS18135 -1.4 -2.4 zinc ABC transporter ATP-binding protein ZnuC compare
BWI76_RS06485 -1.4 -1.2 cytochrome o ubiquinol oxidase subunit III compare
BWI76_RS07725 -1.4 -0.6 iron-enterobactin transporter permease compare
BWI76_RS21000 -1.4 -4.1 exopolyphosphatase compare
BWI76_RS25205 -1.4 -1.5 hypothetical protein compare
BWI76_RS16995 -1.4 -4.2 Fe-S cluster assembly protein SufB compare
BWI76_RS02725 -1.4 -0.8 HxlR family transcriptional regulator compare
BWI76_RS20435 -1.4 -0.9 chorismate synthase compare
BWI76_RS08500 -1.4 -2.5 cytochrome d ubiquinol oxidase subunit 2 compare
BWI76_RS12045 -1.4 -1.6 hypothetical protein compare
BWI76_RS04245 -1.4 -7.2 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS05355 -1.4 -2.7 methionine ABC transporter substrate-binding protein MetQ compare
BWI76_RS20050 -1.4 -0.9 hypothetical protein compare
BWI76_RS25505 -1.3 -3.1 RNase E specificity factor CsrD compare
BWI76_RS18140 -1.3 -2.3 zinc ABC transporter permease compare
BWI76_RS13490 -1.3 -2.0 pyrimidine-specific ribonucleoside hydrolase RihA compare
BWI76_RS12470 -1.3 -1.0 thiosulfate sulfurtransferase PspE compare
BWI76_RS17570 -1.3 -1.6 iron-sulfur-binding protein compare
BWI76_RS04675 -1.3 -3.7 3-isopropylmalate dehydrogenase compare
BWI76_RS24275 -1.3 -2.2 biopolymer transport protein ExbD compare
BWI76_RS21795 -1.3 -2.2 EAL domain-containing protein compare
BWI76_RS21945 -1.3 -2.1 LysR family transcriptional regulator compare
BWI76_RS12185 -1.3 -1.8 hypothetical protein compare
BWI76_RS11110 -1.3 -1.7 cell division protein YceG compare
BWI76_RS21170 -1.3 -2.8 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ compare
BWI76_RS15110 -1.3 -7.5 putative excinuclease ABC subunit A compare
BWI76_RS12955 -1.3 -6.8 multidrug efflux RND transporter permease subunit OqxB compare
BWI76_RS26200 -1.3 -4.4 starch synthase compare
BWI76_RS26440 -1.3 -0.9 hypothetical protein compare
BWI76_RS23125 -1.3 -1.1 propanediol dehydratase small subunit compare
BWI76_RS11610 -1.3 -1.5 glutamate dehydrogenase compare
BWI76_RS11980 -1.3 -1.2 DeoR family transcriptional regulator compare
BWI76_RS04665 -1.2 -8.8 3-isopropylmalate dehydratase small subunit compare
BWI76_RS17945 -1.2 -1.1 hypothetical protein compare
BWI76_RS15435 -1.2 -1.0 hypothetical protein compare
BWI76_RS23930 -1.2 -3.5 transcriptional regulator ArgP compare
BWI76_RS15115 -1.2 -4.8 MFS transporter compare
BWI76_RS01790 -1.2 -5.8 lysine-sensitive aspartokinase 3 compare
BWI76_RS09870 -1.2 -4.6 aromatic amino acid aminotransferase compare
BWI76_RS23015 -1.2 -1.1 cobalt transporter ATP-binding subunit compare
BWI76_RS21480 -1.2 -4.8 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BWI76_RS21580 -1.2 -1.3 SsrA-binding protein compare
BWI76_RS08385 -1.2 -2.1 citrate (Si)-synthase compare
BWI76_RS06295 -1.2 -2.3 S-adenosylmethionine:tRNA ribosyltransferase-isomerase compare
BWI76_RS18385 -1.2 -0.8 hypothetical protein compare
BWI76_RS22095 -1.2 -1.5 multidrug export protein EmrA compare
BWI76_RS08605 -1.2 -1.3 phosphoglyceromutase compare
BWI76_RS01775 -1.2 -0.7 hypothetical protein compare
BWI76_RS27440 -1.2 -2.6 DNA helicase RecG compare
BWI76_RS05175 -1.2 -8.5 dGTPase compare
BWI76_RS26455 -1.2 -1.3 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS11125 -1.2 -0.9 metal-dependent hydrolase compare
BWI76_RS15350 -1.2 -0.7 hypothetical protein compare
BWI76_RS18580 -1.2 -1.2 hypothetical protein compare
BWI76_RS05050 -1.2 -1.6 general secretion pathway protein GspL compare
BWI76_RS04670 -1.2 -4.0 3-isopropylmalate dehydratase large subunit compare
BWI76_RS17780 -1.2 -3.1 septum formation inhibitor compare
BWI76_RS14840 -1.2 -2.3 hypothetical protein compare
BWI76_RS17290 -1.2 -2.8 formyltetrahydrofolate deformylase compare
BWI76_RS16000 -1.2 -0.9 multidrug transporter subunit MdtI compare
BWI76_RS19995 -1.2 -1.6 IclR family transcriptional regulator compare
BWI76_RS19845 -1.2 -3.3 phosphatase compare
BWI76_RS05125 -1.2 -4.5 ferrichrome porin FhuA compare
BWI76_RS21920 -1.1 -2.1 amino acid ABC transporter substrate-binding protein compare
BWI76_RS12950 -1.1 -2.4 acriflavin resistance protein AcrA compare
BWI76_RS03045 -1.1 -0.7 hypothetical protein compare
BWI76_RS06740 -1.1 -1.7 50S ribosomal protein L36 compare
BWI76_RS24595 -1.1 -3.0 dihydroxyacetone kinase subunit DhaK compare
BWI76_RS02180 -1.1 -0.7 hypothetical protein compare
BWI76_RS06830 -1.1 -1.9 recombination protein RecR compare
BWI76_RS27875 -1.1 -0.9 membrane protein compare
BWI76_RS14435 -1.1 -1.0 glutamine ABC transporter ATP-binding protein compare
BWI76_RS09615 -1.1 -1.1 ATP-dependent Clp protease ATP-binding subunit ClpA compare
BWI76_RS08260 -1.1 -1.6 LysR family transcriptional regulator compare
BWI76_RS07185 -1.1 -1.3 hypothetical protein compare
BWI76_RS15825 -1.1 -1.0 hypothetical protein compare
BWI76_RS24500 -1.1 -1.7 urease subunit gamma compare


Specific Phenotypes

For 9 genes in this experiment

For supernatant Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted in Klebsiella michiganensis M5al

For supernatant Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted across organisms