Experiment set10IT055 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x

200 most important genes:

  gene name fitness t score description  
BWI76_RS27305 -4.5 -5.4 glycosyl transferase compare
BWI76_RS01325 -4.2 -2.6 twin-arginine translocase subunit TatB compare
BWI76_RS26665 -3.8 -2.6 DNA-binding response regulator compare
BWI76_RS13560 -3.7 -1.5 amino acid ABC transporter substrate-binding subunit compare
BWI76_RS05075 -3.4 -1.3 type II secretion system protein GspG compare
BWI76_RS24400 -3.3 -4.0 outer membrane channel protein TolC compare
BWI76_RS26620 -3.3 -1.3 Fe-S biogenesis protein NfuA compare
BWI76_RS01210 -3.2 -5.7 tyrosine recombinase XerC compare
BWI76_RS09760 -3.1 -7.0 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS04715 -3.0 -2.1 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS21165 -3.0 -1.7 Fe-S cluster assembly transcriptional regulator IscR compare
BWI76_RS08530 -3.0 -2.7 protein TolA compare
BWI76_RS23480 -2.9 -7.8 EAL domain-containing protein compare
BWI76_RS26455 -2.9 -3.1 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS27290 -2.9 -6.8 hypothetical protein compare
BWI76_RS17400 -2.8 -1.5 transporter compare
BWI76_RS19375 -2.8 -1.8 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
BWI76_RS00180 -2.8 -1.5 F0F1 ATP synthase subunit epsilon compare
BWI76_RS04515 -2.7 -1.5 Co2+/Mg2+ efflux protein ApaG compare
BWI76_RS07740 -2.7 -1.4 Fe2+-enterobactin ABC transporter substrate-binding protein compare
BWI76_RS09755 -2.7 -7.0 phosphoserine transaminase compare
BWI76_RS18165 -2.7 -1.5 NUDIX pyrophosphatase compare
BWI76_RS06765 -2.5 -2.2 transcriptional regulator compare
BWI76_RS20435 -2.5 -1.3 chorismate synthase compare
BWI76_RS23360 -2.5 -3.8 diaminopimelate decarboxylase compare
BWI76_RS25225 -2.4 -5.6 ABC transporter permease compare
BWI76_RS23230 -2.4 -2.8 exodeoxyribonuclease V subunit beta compare
BWI76_RS23240 -2.4 -3.9 exonuclease V subunit gamma compare
BWI76_RS17190 -2.3 -2.3 TonB system transport protein TonB compare
BWI76_RS15835 -2.3 -2.1 hypothetical protein compare
BWI76_RS23920 -2.3 -5.1 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS06740 -2.3 -3.7 50S ribosomal protein L36 compare
BWI76_RS09660 -2.3 -2.4 DNA translocase FtsK compare
BWI76_RS26460 -2.2 -3.8 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS06465 -2.1 -1.9 IclR family transcriptional regulator compare
BWI76_RS08525 -2.1 -3.6 colicin transporter compare
BWI76_RS00345 -2.1 -2.5 protein disulfide oxidoreductase DsbA compare
BWI76_RS20355 -2.0 -3.5 colicin V production protein compare
BWI76_RS07645 -2.0 -1.3 short-chain dehydrogenase/reductase compare
BWI76_RS11300 -2.0 -1.3 cupin compare
BWI76_RS05835 -2.0 -2.4 gamma-glutamyl-phosphate reductase compare
BWI76_RS04240 -1.9 -2.1 thr operon leader peptide compare
BWI76_RS06770 -1.9 -7.2 Hha toxicity attenuator compare
BWI76_RS25000 -1.9 -1.4 malonate decarboxylase acyl carrier protein compare
BWI76_RS00400 -1.9 -1.2 glutamine synthetase compare
BWI76_RS05200 -1.9 -1.8 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS04160 -1.8 -3.5 phosphoserine phosphatase compare
BWI76_RS04955 -1.8 -1.9 hypoxanthine phosphoribosyltransferase compare
BWI76_RS18925 -1.8 -5.7 histidinol dehydrogenase compare
BWI76_RS15825 -1.8 -1.4 hypothetical protein compare
BWI76_RS18955 -1.8 -4.6 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS15660 -1.8 -1.3 hypothetical protein compare
BWI76_RS21130 -1.8 -1.6 Fe-S assembly protein IscX compare
BWI76_RS00720 -1.8 -1.2 DNA-binding response regulator compare
BWI76_RS09635 -1.8 -2.0 amino acid ABC transporter ATP-binding protein compare
BWI76_RS01795 -1.7 -4.5 hypothetical protein compare
BWI76_RS21580 -1.7 -1.3 SsrA-binding protein compare
BWI76_RS06475 -1.7 -1.3 protoheme IX farnesyltransferase compare
BWI76_RS01095 -1.7 -1.6 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS21235 -1.7 -0.9 hypothetical protein compare
BWI76_RS07185 -1.7 -1.8 hypothetical protein compare
BWI76_RS15115 -1.7 -5.8 MFS transporter compare
BWI76_RS09970 -1.7 -4.6 porin OmpA compare
BWI76_RS26395 -1.7 -4.0 cell division protein FtsE compare
BWI76_RS16935 -1.7 -1.1 shikimate dehydrogenase compare
BWI76_RS17775 -1.7 -2.7 hypothetical protein compare
BWI76_RS23015 -1.7 -1.5 cobalt transporter ATP-binding subunit compare
BWI76_RS17720 -1.7 -1.1 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS21475 -1.6 -2.8 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS01870 -1.6 -3.7 diacylglycerol kinase compare
BWI76_RS08495 -1.6 -3.4 cytochrome bd-I ubiquinol oxidase subunit I compare
BWI76_RS07065 -1.6 -5.6 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS24945 -1.6 -1.1 glutamine amidotransferase compare
BWI76_RS26075 -1.6 -3.3 DNA adenine methylase compare
BWI76_RS21000 -1.6 -3.2 exopolyphosphatase compare
BWI76_RS25480 -1.6 -2.2 ribonuclease E/G compare
BWI76_RS18940 -1.5 -3.5 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS02180 -1.5 -1.1 hypothetical protein compare
BWI76_RS18580 -1.5 -1.2 hypothetical protein compare
BWI76_RS24595 -1.5 -4.9 dihydroxyacetone kinase subunit DhaK compare
BWI76_RS15650 -1.5 -3.8 gp5 compare
BWI76_RS01775 -1.5 -1.0 hypothetical protein compare
BWI76_RS07705 -1.5 -2.5 enterochelin esterase compare
BWI76_RS15705 -1.5 -3.8 putative holin protein compare
BWI76_RS10770 -1.5 -2.3 pyrimidine utilization protein C compare
BWI76_RS16075 -1.5 -1.4 oxidoreductase compare
BWI76_RS00855 -1.5 -4.7 argininosuccinate lyase compare
BWI76_RS00760 -1.5 -2.2 cell division protein FtsN compare
BWI76_RS07790 -1.4 -1.9 plasmid stabilization protein compare
BWI76_RS20895 -1.4 -2.8 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS18755 -1.4 -0.9 adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
BWI76_RS20965 -1.4 -1.9 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS00355 -1.4 -2.0 DNA polymerase I compare
BWI76_RS02530 -1.4 -1.7 tRNA dimethylallyltransferase compare
BWI76_RS12295 -1.4 -3.7 hypothetical protein compare
BWI76_RS11980 -1.3 -1.5 DeoR family transcriptional regulator compare
BWI76_RS18930 -1.3 -2.9 histidinol-phosphate transaminase compare
BWI76_RS25230 -1.3 -2.8 phospholipid ABC transporter ATP-binding protein MlaF compare
BWI76_RS27680 -1.3 -2.7 TetR family transcriptional regulator compare
BWI76_RS05840 -1.3 -2.7 glutamate 5-kinase compare
BWI76_RS12235 -1.3 -1.7 hypothetical protein compare
BWI76_RS12090 -1.3 -2.1 HNH endonuclease compare
BWI76_RS07070 -1.3 -2.4 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS04470 -1.3 -4.2 carbamoyl phosphate synthase large subunit compare
BWI76_RS18935 -1.3 -3.3 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS24080 -1.3 -1.1 DUF179 domain-containing protein compare
BWI76_RS14065 -1.3 -1.3 hypothetical protein compare
BWI76_RS15850 -1.3 -2.4 DUF1317 domain-containing protein compare
BWI76_RS06495 -1.3 -5.6 cytochrome ubiquinol oxidase subunit II compare
BWI76_RS13435 -1.3 -1.4 hypothetical protein compare
BWI76_RS00975 -1.3 -6.4 dihydroxy-acid dehydratase compare
BWI76_RS11335 -1.3 -1.0 tautomerase compare
BWI76_RS04465 -1.3 -3.0 carbamoyl-phosphate synthase small subunit compare
BWI76_RS12420 -1.3 -1.0 peptide ABC transporter substrate-binding protein SapA compare
BWI76_RS00845 -1.3 -5.3 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS03920 -1.3 -2.6 N-acetyltransferase compare
BWI76_RS20900 -1.3 -0.8 outer membrane protein assembly factor BamC compare
BWI76_RS03010 -1.3 -4.6 ornithine carbamoyltransferase compare
BWI76_RS16980 -1.3 -3.3 bifunctional cysteine desulfurase/selenocysteine lyase compare
BWI76_RS26775 -1.2 -3.4 endo-1,4-D-glucanase compare
BWI76_RS01330 -1.2 -2.4 twin-arginine translocase subunit TatC compare
BWI76_RS25215 -1.2 -4.1 phospholipid-binding protein MlaC compare
BWI76_RS24585 -1.2 -2.1 glycerol dehydrogenase compare
BWI76_RS25115 -1.2 -3.3 argininosuccinate synthase compare
BWI76_RS07605 -1.2 -2.3 N-acetyltransferase GCN5 compare
BWI76_RS23885 -1.2 -0.9 2-octaprenylphenol hydroxylase compare
BWI76_RS14300 -1.2 -2.5 hypothetical protein compare
BWI76_RS17525 -1.2 -1.5 XshC-Cox1-family protein compare
BWI76_RS21370 -1.2 -1.4 ATP-dependent RNA helicase SrmB compare
BWI76_RS12465 -1.2 -0.9 phage shock protein D compare
BWI76_RS18815 -1.2 -1.3 nitrogenase molybdenum-iron protein alpha chain compare
BWI76_RS26390 -1.2 -2.5 cell division protein FtsX compare
BWI76_RS24885 -1.2 -1.3 PTS galactitol transporter subunit IIB compare
BWI76_RS04815 -1.2 -2.0 cell division protein ZapD compare
BWI76_RS24600 -1.2 -3.7 dihydroxyacetone kinase compare
BWI76_RS05355 -1.2 -2.1 methionine ABC transporter substrate-binding protein MetQ compare
BWI76_RS00480 -1.2 -1.9 hypothetical protein compare
BWI76_RS21980 -1.2 -2.8 hypothetical protein compare
BWI76_RS06485 -1.1 -1.8 cytochrome o ubiquinol oxidase subunit III compare
BWI76_RS26670 -1.1 -5.4 two-component sensor histidine kinase compare
BWI76_RS27915 -1.1 -1.8 YceK/YidQ family lipoprotein compare
BWI76_RS06775 -1.1 -5.7 multidrug efflux RND transporter permease subunit compare
BWI76_RS10575 -1.1 -1.1 polar amino acid ABC transporter permease compare
BWI76_RS15110 -1.1 -7.3 putative excinuclease ABC subunit A compare
BWI76_RS17155 -1.1 -1.2 hypothetical protein compare
BWI76_RS21070 -1.1 -1.1 outer membrane protein assembly factor BamB compare
BWI76_RS26260 -1.1 -2.7 hypothetical protein compare
BWI76_RS15435 -1.1 -1.2 hypothetical protein compare
BWI76_RS21715 -1.1 -1.4 transcriptional regulator compare
BWI76_RS19850 -1.1 -1.8 tRNA-Pro compare
BWI76_RS01885 -1.1 -1.0 CsbD family protein compare
BWI76_RS09870 -1.1 -4.7 aromatic amino acid aminotransferase compare
BWI76_RS26570 -1.1 -1.6 anion permease compare
BWI76_RS14970 -1.1 -1.1 pyrroline-5-carboxylate reductase compare
BWI76_RS15270 -1.1 -2.9 phenazine biosynthesis protein PhzF family compare
BWI76_RS25505 -1.1 -2.9 RNase E specificity factor CsrD compare
BWI76_RS17805 -1.1 -0.9 membrane protein compare
BWI76_RS25065 -1.1 -1.2 polyribonucleotide nucleotidyltransferase compare
BWI76_RS04255 -1.1 -4.0 threonine synthase compare
BWI76_RS06980 -1.1 -2.1 ureidoglycolate lyase compare
BWI76_RS11040 -1.1 -2.2 ribonuclease E compare
BWI76_RS05175 -1.1 -8.0 dGTPase compare
BWI76_RS03025 -1.1 -1.5 N-acetyltransferase compare
BWI76_RS24745 -1.1 -2.1 membrane protein compare
BWI76_RS12955 -1.1 -4.2 multidrug efflux RND transporter permease subunit OqxB compare
BWI76_RS12405 -1.0 -3.2 diguanylate phosphodiesterase compare
BWI76_RS14870 -1.0 -1.7 hypothetical protein compare
BWI76_RS09640 -1.0 -1.7 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS18710 -1.0 -6.0 GGDEF-domain containing protein compare
BWI76_RS18920 -1.0 -2.3 ATP phosphoribosyltransferase compare
BWI76_RS06540 -1.0 -1.9 DNA-binding protein HU-beta compare
BWI76_RS06240 -1.0 -2.6 branched-chain amino acid transport system 2 carrier protein BrnQ compare
BWI76_RS16975 -1.0 -1.5 cysteine desufuration protein SufE compare
BWI76_RS10945 -1.0 -1.7 SecY/SecA suppressor protein compare
BWI76_RS17200 -1.0 -1.1 hypothetical protein compare
BWI76_RS27235 -1.0 -4.4 murein hydrolase activator EnvC compare
BWI76_RS13730 -1.0 -1.6 hypothetical protein compare
BWI76_RS00835 -1.0 -4.3 phosphoenolpyruvate carboxylase compare
BWI76_RS04250 -1.0 -2.6 homoserine kinase compare
BWI76_RS10475 -1.0 -1.9 binding-protein-dependent transport system inner membrane protein compare
BWI76_RS18385 -1.0 -0.8 hypothetical protein compare
BWI76_RS15060 -1.0 -1.6 MarR family transcriptional regulator compare
BWI76_RS27310 -1.0 -2.7 glycosyltransferase compare
BWI76_RS15565 -1.0 -2.7 hypothetical protein compare
BWI76_RS19685 -1.0 -3.1 lysine transporter compare
BWI76_RS23485 -1.0 -3.9 hypothetical protein compare
BWI76_RS01790 -1.0 -5.9 lysine-sensitive aspartokinase 3 compare
BWI76_RS08980 -1.0 -0.9 DNA starvation/stationary phase protection protein compare
BWI76_RS00850 -1.0 -3.0 acetylglutamate kinase compare
BWI76_RS03925 -1.0 -2.9 N-acetyltransferase GCN5 compare
BWI76_RS11110 -1.0 -1.8 cell division protein YceG compare
BWI76_RS09895 -1.0 -2.1 aliphatic sulfonates ABC transporter ATP-binding protein compare
BWI76_RS10745 -1.0 -0.8 hypothetical protein compare
BWI76_RS15130 -1.0 -2.1 hypothetical protein compare
BWI76_RS00010 -1.0 -3.7 DNA replication and repair protein RecF compare
BWI76_RS22450 -1.0 -1.5 selenoprotein W-related protein compare
BWI76_RS25335 -1.0 -1.7 stringent starvation protein A compare
BWI76_RS18950 -1.0 -2.0 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS23220 -1.0 -3.7 amino-acid N-acetyltransferase compare
BWI76_RS26015 -1.0 -1.4 DUF2559 domain-containing protein compare


Specific Phenotypes

For 1 genes in this experiment

For supernatant Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted in Klebsiella michiganensis M5al

For supernatant Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted across organisms