Experiment set10IT054 for Klebsiella michiganensis M5al

Compare to:

Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x

200 most important genes:

  gene name fitness t score description  
BWI76_RS23360 -6.1 -4.1 diaminopimelate decarboxylase compare
BWI76_RS18925 -5.7 -7.8 histidinol dehydrogenase compare
BWI76_RS09645 -5.6 -2.0 thioredoxin-disulfide reductase compare
BWI76_RS09755 -5.2 -7.8 phosphoserine transaminase compare
BWI76_RS09660 -5.1 -3.5 DNA translocase FtsK compare
BWI76_RS23240 -5.0 -3.4 exonuclease V subunit gamma compare
BWI76_RS04465 -4.6 -5.5 carbamoyl-phosphate synthase small subunit compare
BWI76_RS17720 -4.6 -1.6 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS18935 -4.6 -6.5 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS20965 -4.5 -5.5 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS04160 -4.5 -4.8 phosphoserine phosphatase compare
BWI76_RS27305 -4.2 -9.1 glycosyl transferase compare
BWI76_RS23920 -4.1 -6.7 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS00385 -4.1 -7.2 nitrogen assimilation regulatory protein compare
BWI76_RS01615 -4.1 -11.3 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS00855 -4.0 -11.0 argininosuccinate lyase compare
BWI76_RS23480 -3.9 -12.9 EAL domain-containing protein compare
BWI76_RS01210 -3.9 -4.5 tyrosine recombinase XerC compare
BWI76_RS05200 -3.8 -2.6 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS20350 -3.7 -7.1 amidophosphoribosyltransferase compare
BWI76_RS04250 -3.7 -6.5 homoserine kinase compare
BWI76_RS25320 -3.6 -6.7 glutamate synthase compare
BWI76_RS01610 -3.5 -7.7 phosphoribosylamine--glycine ligase compare
BWI76_RS04470 -3.5 -9.7 carbamoyl phosphate synthase large subunit compare
BWI76_RS09970 -3.5 -7.2 porin OmpA compare
BWI76_RS07070 -3.4 -6.4 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS00390 -3.3 -6.3 two-component system sensor histidine kinase NtrB compare
BWI76_RS22690 -3.3 -3.6 adenylyl-sulfate kinase compare
BWI76_RS25315 -3.3 -9.2 glutamate synthase large subunit compare
BWI76_RS23365 -3.3 -8.5 LysR family transcriptional regulator compare
BWI76_RS04645 -3.3 -6.3 3-dehydroquinase compare
BWI76_RS26085 -3.2 -2.2 3-dehydroquinate synthase compare
BWI76_RS00400 -3.2 -1.9 glutamine synthetase compare
BWI76_RS20895 -3.2 -5.2 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS15115 -3.1 -7.8 MFS transporter compare
BWI76_RS00345 -3.0 -4.6 protein disulfide oxidoreductase DsbA compare
BWI76_RS09760 -3.0 -4.3 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS00845 -3.0 -10.0 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS04255 -3.0 -10.0 threonine synthase compare
BWI76_RS23220 -2.9 -8.4 amino-acid N-acetyltransferase compare
BWI76_RS18940 -2.9 -5.9 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS23230 -2.8 -5.3 exodeoxyribonuclease V subunit beta compare
BWI76_RS20355 -2.8 -4.7 colicin V production protein compare
BWI76_RS00965 -2.8 -1.3 acetolactate synthase 2 small subunit compare
BWI76_RS18605 -2.7 -2.3 oxidoreductase molybdopterin-binding protein compare
BWI76_RS11860 -2.7 -10.1 anthranilate synthase component I compare
BWI76_RS04715 -2.7 -2.6 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS21265 -2.6 -9.9 phosphoribosylformylglycinamidine synthase compare
BWI76_RS18715 -2.6 -7.6 hypothetical protein compare
BWI76_RS00990 -2.6 -5.1 ketol-acid reductoisomerase compare
BWI76_RS20230 -2.6 -1.7 hypothetical protein compare
BWI76_RS25115 -2.6 -4.7 argininosuccinate synthase compare
BWI76_RS18930 -2.6 -5.0 histidinol-phosphate transaminase compare
BWI76_RS18950 -2.5 -1.8 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS00850 -2.5 -6.0 acetylglutamate kinase compare
BWI76_RS08385 -2.5 -3.9 citrate (Si)-synthase compare
BWI76_RS22755 -2.5 -6.7 phosphoadenosine phosphosulfate reductase compare
BWI76_RS20435 -2.5 -2.0 chorismate synthase compare
BWI76_RS04510 -2.5 -1.8 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS07065 -2.4 -7.2 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS25335 -2.4 -2.7 stringent starvation protein A compare
BWI76_RS09910 -2.4 -13.2 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS21475 -2.4 -4.7 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS18710 -2.3 -10.8 GGDEF-domain containing protein compare
BWI76_RS03010 -2.3 -7.3 ornithine carbamoyltransferase compare
BWI76_RS02995 -2.2 -5.7 aspartate carbamoyltransferase compare
BWI76_RS00835 -2.2 -9.7 phosphoenolpyruvate carboxylase compare
BWI76_RS26055 -2.2 -5.6 siroheme synthase compare
BWI76_RS06765 -2.2 -3.2 transcriptional regulator compare
BWI76_RS18955 -2.1 -4.5 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS08380 -2.1 -1.7 endonuclease VIII compare
BWI76_RS15825 -2.1 -1.7 hypothetical protein compare
BWI76_RS17805 -2.1 -1.6 membrane protein compare
BWI76_RS05840 -2.1 -6.7 glutamate 5-kinase compare
BWI76_RS22760 -2.1 -4.4 sulfite reductase subunit beta compare
BWI76_RS10990 -2.1 -4.1 dihydroorotase compare
BWI76_RS26395 -2.0 -5.5 cell division protein FtsE compare
BWI76_RS00975 -2.0 -6.6 dihydroxy-acid dehydratase compare
BWI76_RS22765 -2.0 -7.4 sulfite reductase subunit alpha compare
BWI76_RS27385 -2.0 -5.0 orotate phosphoribosyltransferase compare
BWI76_RS04245 -2.0 -8.6 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS14835 -2.0 -1.3 hypothetical protein compare
BWI76_RS14075 -2.0 -1.6 TetR family transcriptional regulator compare
BWI76_RS19010 -1.9 -3.3 polysaccharide pyruvyl transferase yvff compare
BWI76_RS00805 -1.9 -3.4 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS25870 -1.9 -1.7 elongation factor Tu compare
BWI76_RS25645 -1.9 -8.0 shikimate dehydrogenase compare
BWI76_RS13250 -1.9 -1.5 cytochrome b561 compare
BWI76_RS26620 -1.8 -1.2 Fe-S biogenesis protein NfuA compare
BWI76_RS26570 -1.8 -2.7 anion permease compare
BWI76_RS21810 -1.8 -1.8 universal stress protein compare
BWI76_RS05835 -1.8 -2.0 gamma-glutamyl-phosphate reductase compare
BWI76_RS11965 -1.8 -1.7 orotidine-5'-phosphate decarboxylase compare
BWI76_RS23915 -1.8 -2.6 5-formyltetrahydrofolate cyclo-ligase compare
BWI76_RS17385 -1.8 -7.2 nitrate regulatory protein compare
BWI76_RS17365 -1.7 -7.1 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) compare
BWI76_RS08825 -1.7 -3.2 cyclic pyranopterin monophosphate synthase MoaC compare
BWI76_RS00785 -1.7 -4.6 cystathionine gamma-synthase compare
BWI76_RS23265 -1.7 -2.8 hypothetical protein compare
BWI76_RS06770 -1.7 -7.2 Hha toxicity attenuator compare
BWI76_RS23475 -1.7 -8.6 helix-turn-helix transcriptional regulator compare
BWI76_RS06530 -1.7 -4.0 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS27390 -1.7 -3.6 ribonuclease PH compare
BWI76_RS01325 -1.6 -2.0 twin-arginine translocase subunit TatB compare
BWI76_RS23485 -1.6 -6.3 hypothetical protein compare
BWI76_RS01655 -1.6 -5.4 homoserine O-succinyltransferase compare
BWI76_RS17975 -1.6 -3.9 tail-specific protease compare
BWI76_RS09190 -1.6 -2.8 hypothetical protein compare
BWI76_RS08925 -1.6 -3.6 DNA-binding protein YbiB compare
BWI76_RS15835 -1.6 -1.0 hypothetical protein compare
BWI76_RS17300 -1.6 -2.0 tRNA-Tyr compare
BWI76_RS16965 -1.6 -2.4 murein lipoprotein compare
BWI76_RS11845 -1.5 -3.3 tryptophan synthase subunit beta compare
BWI76_RS15850 -1.5 -3.0 DUF1317 domain-containing protein compare
BWI76_RS24285 -1.5 -4.7 cystathionine beta-lyase compare
BWI76_RS00980 -1.5 -5.8 PLP-dependent threonine dehydratase compare
BWI76_RS20900 -1.4 -1.0 outer membrane protein assembly factor BamC compare
BWI76_RS03295 -1.4 -1.1 transposase compare
BWI76_RS04305 -1.4 -0.9 molecular chaperone DnaJ compare
BWI76_RS15660 -1.4 -1.4 hypothetical protein compare
BWI76_RS08180 -1.4 -5.2 asparagine synthase B compare
BWI76_RS01885 -1.4 -1.4 CsbD family protein compare
BWI76_RS05355 -1.4 -3.5 methionine ABC transporter substrate-binding protein MetQ compare
BWI76_RS17380 -1.4 -3.7 nitrate transporter component compare
BWI76_RS14410 -1.4 -3.0 hypothetical protein compare
BWI76_RS01385 -1.4 -2.5 potassium transporter compare
BWI76_RS01330 -1.4 -3.5 twin-arginine translocase subunit TatC compare
BWI76_RS19685 -1.4 -2.8 lysine transporter compare
BWI76_RS06680 -1.4 -1.1 hypothetical protein compare
BWI76_RS23070 -1.3 -3.2 cobalt-precorrin-7 (C(5))-methyltransferase compare
BWI76_RS01350 -1.3 -1.0 NAD(P)H-flavin reductase compare
BWI76_RS04570 -1.3 -4.1 RNA polymerase-associated protein RapA compare
BWI76_RS15435 -1.3 -1.6 hypothetical protein compare
BWI76_RS04240 -1.3 -2.5 thr operon leader peptide compare
BWI76_RS26390 -1.3 -2.9 cell division protein FtsX compare
BWI76_RS01220 -1.3 -4.6 DNA-dependent helicase II compare
BWI76_RS26775 -1.3 -2.3 endo-1,4-D-glucanase compare
BWI76_RS24120 -1.3 -3.0 YggW family oxidoreductase compare
BWI76_RS25280 -1.2 -1.5 RNase adaptor protein RapZ compare
BWI76_RS06405 -1.2 -1.7 2-dehydropantoate 2-reductase compare
BWI76_RS11840 -1.2 -1.8 tryptophan synthase subunit alpha compare
BWI76_RS15690 -1.2 -2.8 hypothetical protein compare
BWI76_RS18920 -1.2 -1.9 ATP phosphoribosyltransferase compare
BWI76_RS00760 -1.2 -2.3 cell division protein FtsN compare
BWI76_RS15845 -1.2 -1.0 hypothetical protein compare
BWI76_RS04670 -1.2 -4.8 3-isopropylmalate dehydratase large subunit compare
BWI76_RS21505 -1.2 -1.1 hypothetical protein compare
BWI76_RS19785 -1.2 -2.7 microcin C ABC transporter permease YejB compare
BWI76_RS16000 -1.2 -1.3 multidrug transporter subunit MdtI compare
BWI76_RS22805 -1.2 -5.2 GTP diphosphokinase compare
BWI76_RS21140 -1.2 -1.5 molecular chaperone HscA compare
BWI76_RS09030 -1.2 -4.1 transpeptidase compare
BWI76_RS11150 -1.1 -1.1 membrane protein compare
BWI76_RS26635 -1.1 -1.7 hypothetical protein compare
BWI76_RS21580 -1.1 -1.4 SsrA-binding protein compare
BWI76_RS02530 -1.1 -1.5 tRNA dimethylallyltransferase compare
BWI76_RS17370 -1.1 -1.5 nitrate transporter NasD compare
BWI76_RS16675 -1.1 -1.2 ABC transporter compare
BWI76_RS21480 -1.1 -4.9 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BWI76_RS12070 -1.1 -1.1 hypothetical protein compare
BWI76_RS01540 -1.1 -1.4 thiamine biosynthesis protein ThiS compare
BWI76_RS04655 -1.1 -2.6 shikimate dehydrogenase compare
BWI76_RS19035 -1.1 -4.6 dTDP-rhamnosyl transferase compare
BWI76_RS24585 -1.1 -2.0 glycerol dehydrogenase compare
BWI76_RS20750 -1.1 -1.0 carboxysome structural protein EutK compare
BWI76_RS04270 -1.1 -2.9 transaldolase compare
BWI76_RS20380 -1.1 -0.8 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS16315 -1.1 -1.3 SirA-like protein compare
BWI76_RS25480 -1.1 -2.5 ribonuclease E/G compare
BWI76_RS08705 -1.1 -3.5 putative LuxR family regulatory protein compare
BWI76_RS08720 -1.1 -1.5 imidazolonepropionase compare
BWI76_RS11855 -1.1 -3.1 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS13400 -1.0 -3.6 GntR family transcriptional regulator compare
BWI76_RS03105 -1.0 -0.9 myo-inosose-2 dehydratase compare
BWI76_RS21395 -1.0 -2.2 DTW domain-containing protein compare
BWI76_RS17290 -1.0 -2.8 formyltetrahydrofolate deformylase compare
BWI76_RS23885 -1.0 -1.2 2-octaprenylphenol hydroxylase compare
BWI76_RS04665 -1.0 -7.0 3-isopropylmalate dehydratase small subunit compare
BWI76_RS15830 -1.0 -2.0 hypothetical protein compare
BWI76_RS00180 -1.0 -1.3 F0F1 ATP synthase subunit epsilon compare
BWI76_RS02180 -1.0 -1.1 hypothetical protein compare
BWI76_RS12235 -1.0 -1.4 hypothetical protein compare
BWI76_RS13595 -1.0 -3.4 transcriptional regulator compare
BWI76_RS08260 -1.0 -1.5 LysR family transcriptional regulator compare
BWI76_RS02735 -1.0 -2.8 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS01935 -1.0 -1.7 thiamin phosphate synthase compare
BWI76_RS11850 -1.0 -3.9 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS21165 -1.0 -1.2 Fe-S cluster assembly transcriptional regulator IscR compare
BWI76_RS06325 -1.0 -1.7 hypothetical protein compare
BWI76_RS00375 -1.0 -1.5 hypothetical protein compare
BWI76_RS25060 -1.0 -2.8 lipoprotein NlpI compare
BWI76_RS27915 -1.0 -2.0 YceK/YidQ family lipoprotein compare
BWI76_RS01190 -1.0 -1.6 iron donor protein CyaY compare
BWI76_RS02410 -1.0 -1.7 EF-P beta-lysylation protein EpmB compare
BWI76_RS15840 -1.0 -2.5 prophage protein compare
BWI76_RS12280 -1.0 -1.5 hypothetical protein compare
BWI76_RS01870 -1.0 -2.3 diacylglycerol kinase compare
BWI76_RS12295 -1.0 -2.6 hypothetical protein compare
BWI76_RS06800 -1.0 -0.8 DUF2496 domain-containing protein compare
BWI76_RS15215 -1.0 -0.9 N-acetyltransferase compare


Specific Phenotypes

For 4 genes in this experiment

For supernatant Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted in Klebsiella michiganensis M5al

For supernatant Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted across organisms