Experiment set10IT051 for Klebsiella michiganensis M5al

Compare to:

Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM

200 most important genes:

  gene name fitness t score description  
BWI76_RS05835 -5.7 -3.9 gamma-glutamyl-phosphate reductase compare
BWI76_RS23360 -5.3 -5.1 diaminopimelate decarboxylase compare
BWI76_RS23240 -5.0 -3.4 exonuclease V subunit gamma compare
BWI76_RS23920 -4.5 -6.1 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS09660 -4.3 -4.1 DNA translocase FtsK compare
BWI76_RS23230 -4.3 -3.0 exodeoxyribonuclease V subunit beta compare
BWI76_RS20895 -4.3 -5.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS09645 -4.3 -2.5 thioredoxin-disulfide reductase compare
BWI76_RS09755 -4.1 -10.9 phosphoserine transaminase compare
BWI76_RS01615 -4.1 -9.7 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS07070 -3.9 -5.8 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS18950 -3.9 -5.9 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS20355 -3.9 -4.5 colicin V production protein compare
BWI76_RS01210 -3.8 -3.6 tyrosine recombinase XerC compare
BWI76_RS26085 -3.8 -3.1 3-dehydroquinate synthase compare
BWI76_RS24400 -3.7 -7.9 outer membrane channel protein TolC compare
BWI76_RS07065 -3.7 -6.2 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS25600 -3.7 -1.5 tRNA-Thr compare
BWI76_RS21265 -3.6 -16.5 phosphoribosylformylglycinamidine synthase compare
BWI76_RS25230 -3.5 -7.2 phospholipid ABC transporter ATP-binding protein MlaF compare
BWI76_RS27305 -3.5 -10.6 glycosyl transferase compare
BWI76_RS26665 -3.5 -4.1 DNA-binding response regulator compare
BWI76_RS04160 -3.3 -6.6 phosphoserine phosphatase compare
BWI76_RS26570 -3.3 -3.9 anion permease compare
BWI76_RS04645 -3.2 -6.1 3-dehydroquinase compare
BWI76_RS00400 -3.2 -2.1 glutamine synthetase compare
BWI76_RS23365 -3.1 -5.2 LysR family transcriptional regulator compare
BWI76_RS09760 -3.0 -3.2 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS02410 -2.8 -2.7 EF-P beta-lysylation protein EpmB compare
BWI76_RS21475 -2.8 -4.7 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS20350 -2.8 -8.6 amidophosphoribosyltransferase compare
BWI76_RS25225 -2.7 -4.5 ABC transporter permease compare
BWI76_RS04470 -2.7 -8.7 carbamoyl phosphate synthase large subunit compare
BWI76_RS18930 -2.6 -5.2 histidinol-phosphate transaminase compare
BWI76_RS27290 -2.6 -7.9 hypothetical protein compare
BWI76_RS05200 -2.6 -3.0 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS04530 -2.6 -2.4 peptidylprolyl isomerase SurA compare
BWI76_RS04250 -2.5 -9.5 homoserine kinase compare
BWI76_RS04305 -2.4 -1.4 molecular chaperone DnaJ compare
BWI76_RS08530 -2.4 -4.0 protein TolA compare
BWI76_RS04255 -2.4 -6.7 threonine synthase compare
BWI76_RS27310 -2.4 -8.8 glycosyltransferase compare
BWI76_RS06770 -2.4 -11.8 Hha toxicity attenuator compare
BWI76_RS20965 -2.4 -3.4 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS20435 -2.4 -1.4 chorismate synthase compare
BWI76_RS04465 -2.3 -5.8 carbamoyl-phosphate synthase small subunit compare
BWI76_RS05840 -2.3 -6.9 glutamate 5-kinase compare
BWI76_RS18935 -2.3 -6.4 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS09640 -2.3 -3.2 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS09970 -2.3 -6.6 porin OmpA compare
BWI76_RS02530 -2.3 -3.0 tRNA dimethylallyltransferase compare
BWI76_RS01610 -2.3 -7.0 phosphoribosylamine--glycine ligase compare
BWI76_RS00850 -2.2 -8.9 acetylglutamate kinase compare
BWI76_RS23220 -2.2 -5.6 amino-acid N-acetyltransferase compare
BWI76_RS15835 -2.2 -1.8 hypothetical protein compare
BWI76_RS18925 -2.2 -5.1 histidinol dehydrogenase compare
BWI76_RS25215 -2.2 -5.9 phospholipid-binding protein MlaC compare
BWI76_RS17720 -2.2 -1.7 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS15115 -2.1 -7.8 MFS transporter compare
BWI76_RS18940 -2.1 -4.1 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS25335 -2.1 -5.1 stringent starvation protein A compare
BWI76_RS23480 -2.1 -6.8 EAL domain-containing protein compare
BWI76_RS00855 -2.0 -7.3 argininosuccinate lyase compare
BWI76_RS26395 -2.0 -5.9 cell division protein FtsE compare
BWI76_RS08500 -2.0 -2.9 cytochrome d ubiquinol oxidase subunit 2 compare
BWI76_RS04510 -2.0 -2.4 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS04240 -2.0 -2.3 thr operon leader peptide compare
BWI76_RS00845 -2.0 -7.5 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS15825 -2.0 -3.4 hypothetical protein compare
BWI76_RS20650 -2.0 -1.8 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS26390 -1.9 -6.2 cell division protein FtsX compare
BWI76_RS01885 -1.9 -1.9 CsbD family protein compare
BWI76_RS21070 -1.9 -3.0 outer membrane protein assembly factor BamB compare
BWI76_RS00345 -1.9 -2.9 protein disulfide oxidoreductase DsbA compare
BWI76_RS18955 -1.9 -5.9 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS04715 -1.9 -2.6 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS26075 -1.8 -4.6 DNA adenine methylase compare
BWI76_RS00835 -1.8 -7.7 phosphoenolpyruvate carboxylase compare
BWI76_RS18920 -1.8 -4.2 ATP phosphoribosyltransferase compare
BWI76_RS16715 -1.8 -10.1 hypothetical protein compare
BWI76_RS03010 -1.8 -8.0 ornithine carbamoyltransferase compare
BWI76_RS18135 -1.8 -6.0 zinc ABC transporter ATP-binding protein ZnuC compare
BWI76_RS25220 -1.7 -2.9 outer membrane lipid asymmetry maintenance protein MlaD compare
BWI76_RS00975 -1.7 -7.8 dihydroxy-acid dehydratase compare
BWI76_RS04245 -1.7 -10.1 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS25645 -1.7 -7.2 shikimate dehydrogenase compare
BWI76_RS04670 -1.6 -7.5 3-isopropylmalate dehydratase large subunit compare
BWI76_RS08535 -1.6 -3.0 translocation protein TolB compare
BWI76_RS06765 -1.6 -2.0 transcriptional regulator compare
BWI76_RS06780 -1.6 -5.0 MexE family multidrug efflux RND transporter periplasmic adaptor subunit compare
BWI76_RS06775 -1.6 -7.8 multidrug efflux RND transporter permease subunit compare
BWI76_RS08385 -1.6 -2.7 citrate (Si)-synthase compare
BWI76_RS00965 -1.6 -1.2 acetolactate synthase 2 small subunit compare
BWI76_RS01330 -1.6 -3.5 twin-arginine translocase subunit TatC compare
BWI76_RS09635 -1.5 -2.7 amino acid ABC transporter ATP-binding protein compare
BWI76_RS20475 -1.5 -3.6 phospholipid-binding lipoprotein MlaA compare
BWI76_RS04675 -1.5 -6.5 3-isopropylmalate dehydrogenase compare
BWI76_RS25115 -1.5 -4.3 argininosuccinate synthase compare
BWI76_RS21480 -1.5 -6.1 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BWI76_RS02995 -1.5 -5.6 aspartate carbamoyltransferase compare
BWI76_RS26670 -1.5 -5.5 two-component sensor histidine kinase compare
BWI76_RS23320 -1.5 -1.8 hypothetical protein compare
BWI76_RS00805 -1.5 -3.4 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS26000 -1.4 -3.9 aspartate aminotransferase family protein compare
BWI76_RS00990 -1.4 -6.9 ketol-acid reductoisomerase compare
BWI76_RS04665 -1.4 -10.8 3-isopropylmalate dehydratase small subunit compare
BWI76_RS12375 -1.4 -4.4 DNA-invertase hin compare
BWI76_RS07740 -1.4 -1.6 Fe2+-enterobactin ABC transporter substrate-binding protein compare
BWI76_RS15110 -1.4 -9.4 putative excinuclease ABC subunit A compare
BWI76_RS01935 -1.4 -2.6 thiamin phosphate synthase compare
BWI76_RS08525 -1.4 -3.2 colicin transporter compare
BWI76_RS13435 -1.3 -2.0 hypothetical protein compare
BWI76_RS11965 -1.3 -4.8 orotidine-5'-phosphate decarboxylase compare
BWI76_RS09870 -1.3 -5.2 aromatic amino acid aminotransferase compare
BWI76_RS21685 -1.3 -1.7 hypothetical protein compare
BWI76_RS19805 -1.3 -3.4 Bcr/CflA family multidrug efflux MFS transporter compare
BWI76_RS11980 -1.3 -1.8 DeoR family transcriptional regulator compare
BWI76_RS13380 -1.3 -2.5 hypothetical protein compare
BWI76_RS01325 -1.3 -1.8 twin-arginine translocase subunit TatB compare
BWI76_RS18360 -1.3 -1.7 aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase family protein compare
BWI76_RS19010 -1.3 -3.2 polysaccharide pyruvyl transferase yvff compare
BWI76_RS11840 -1.3 -1.9 tryptophan synthase subunit alpha compare
BWI76_RS19685 -1.3 -4.4 lysine transporter compare
BWI76_RS01090 -1.2 -5.0 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
BWI76_RS00875 -1.2 -4.1 DNA-binding transcriptional regulator FabR compare
BWI76_RS19845 -1.2 -3.3 phosphatase compare
BWI76_RS14915 -1.2 -3.6 hypothetical protein compare
BWI76_RS17400 -1.2 -1.4 transporter compare
BWI76_RS11110 -1.2 -2.2 cell division protein YceG compare
BWI76_RS06295 -1.2 -4.9 S-adenosylmethionine:tRNA ribosyltransferase-isomerase compare
BWI76_RS15680 -1.2 -3.9 hypothetical protein compare
BWI76_RS06740 -1.2 -3.6 50S ribosomal protein L36 compare
BWI76_RS16965 -1.2 -2.4 murein lipoprotein compare
BWI76_RS01795 -1.2 -4.6 hypothetical protein compare
BWI76_RS04685 -1.2 -5.8 putative leucine operon leader peptide compare
BWI76_RS12790 -1.1 -1.6 lactate dehydrogenase compare
BWI76_RS08640 -1.1 -1.8 multidrug efflux pump-associated protein, AcrZ family compare
BWI76_RS21000 -1.1 -4.0 exopolyphosphatase compare
BWI76_RS24885 -1.1 -2.0 PTS galactitol transporter subunit IIB compare
BWI76_RS16425 -1.1 -1.1 hypothetical protein compare
BWI76_RS17045 -1.1 -1.3 hypothetical protein compare
BWI76_RS25505 -1.1 -4.8 RNase E specificity factor CsrD compare
BWI76_RS08495 -1.1 -4.6 cytochrome bd-I ubiquinol oxidase subunit I compare
BWI76_RS16995 -1.1 -4.0 Fe-S cluster assembly protein SufB compare
BWI76_RS19035 -1.1 -4.3 dTDP-rhamnosyl transferase compare
BWI76_RS11275 -1.1 -4.7 sensor protein PhoQ compare
BWI76_RS19910 -1.1 -5.2 phosphotransferase RcsD compare
BWI76_RS23485 -1.1 -5.8 hypothetical protein compare
BWI76_RS12330 -1.1 -2.8 hypothetical protein compare
BWI76_RS18710 -1.1 -7.4 GGDEF-domain containing protein compare
BWI76_RS26200 -1.1 -3.6 starch synthase compare
BWI76_RS20795 -1.1 -1.2 ethanolamine catabolic microcompartment shell protein EutN compare
BWI76_RS25065 -1.1 -1.8 polyribonucleotide nucleotidyltransferase compare
BWI76_RS16990 -1.1 -4.0 ABC transporter ATP-binding protein compare
BWI76_RS24910 -1.1 -4.8 rRNA (cytidine-2'-O-)-methyltransferase compare
BWI76_RS24745 -1.1 -2.5 membrane protein compare
BWI76_RS23475 -1.1 -6.6 helix-turn-helix transcriptional regulator compare
BWI76_RS14770 -1.1 -1.5 PTS IIA 2 domain protein compare
BWI76_RS01200 -1.1 -1.3 diaminopimelate epimerase compare
BWI76_RS20565 -1.1 -1.4 hypothetical protein compare
BWI76_RS11860 -1.1 -6.1 anthranilate synthase component I compare
BWI76_RS25070 -1.1 -1.1 hypothetical protein compare
BWI76_RS19935 -1.1 -1.7 hypothetical protein compare
BWI76_RS06525 -1.1 -4.6 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS15850 -1.1 -2.7 DUF1317 domain-containing protein compare
BWI76_RS11610 -1.0 -2.7 glutamate dehydrogenase compare
BWI76_RS04680 -1.0 -5.6 2-isopropylmalate synthase compare
BWI76_RS19920 -1.0 -4.9 hybrid sensor histidine kinase/response regulator compare
BWI76_RS17290 -1.0 -2.8 formyltetrahydrofolate deformylase compare
BWI76_RS24900 -1.0 -1.4 DeoR family transcriptional regulator compare
BWI76_RS24825 -1.0 -1.9 2-hydroxy-3-oxopropionate reductase compare
BWI76_RS08025 -1.0 -2.9 septal ring lytic transglycosylase RlpA compare
BWI76_RS21580 -1.0 -1.4 SsrA-binding protein compare
BWI76_RS00305 -1.0 -5.6 GntR family transcriptional regulator compare
BWI76_RS23970 -1.0 -1.6 mechanosensitive ion channel protein MscS compare
BWI76_RS21465 -1.0 -3.0 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS06530 -1.0 -2.6 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS16980 -1.0 -2.9 bifunctional cysteine desulfurase/selenocysteine lyase compare
BWI76_RS05175 -1.0 -8.0 dGTPase compare
BWI76_RS12335 -1.0 -4.5 hypothetical protein compare
BWI76_RS18715 -0.9 -4.1 hypothetical protein compare
BWI76_RS01115 -0.9 -2.7 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS21285 -0.9 -1.4 HAD family hydrolase compare
BWI76_RS24120 -0.9 -2.6 YggW family oxidoreductase compare
BWI76_RS23265 -0.9 -2.2 hypothetical protein compare
BWI76_RS24605 -0.9 -5.0 dihydroxyacetone kinase subunit DhaM compare
BWI76_RS16485 -0.9 -1.6 ribonuclease T compare
BWI76_RS19840 -0.9 -0.9 hypothetical protein compare
BWI76_RS27875 -0.9 -1.1 membrane protein compare
BWI76_RS18140 -0.9 -3.3 zinc ABC transporter permease compare
BWI76_RS27605 -0.9 -2.2 hypothetical protein compare
BWI76_RS01220 -0.9 -3.3 DNA-dependent helicase II compare
BWI76_RS00960 -0.9 -4.4 acetolactate synthase 2 catalytic subunit compare
BWI76_RS00980 -0.9 -5.4 PLP-dependent threonine dehydratase compare
BWI76_RS24600 -0.9 -3.7 dihydroxyacetone kinase compare
BWI76_RS16075 -0.9 -1.4 oxidoreductase compare
BWI76_RS21350 -0.9 -1.4 anti-RNA polymerase sigma factor SigE compare
BWI76_RS24285 -0.9 -3.7 cystathionine beta-lyase compare
BWI76_RS10625 -0.9 -5.9 hypothetical protein compare
BWI76_RS25480 -0.9 -2.7 ribonuclease E/G compare


Specific Phenotypes

For 3 genes in this experiment

For supernatant Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted in Klebsiella michiganensis M5al

For supernatant Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted across organisms