Experiment set10IT046 for Paraburkholderia bryophila 376MFSha3.1

Compare to:

LB

200 most detrimental genes:

  gene name fitness t score description  
H281DRAFT_00379 +1.6 2.5 dihydroorotate oxidase B, catalytic subunit /dihydrouracil dehydrogenase (NAD+) /dihydropyrimidine dehydrogenase (NADP+) compare
H281DRAFT_00523 +1.2 2.3 protease FtsH subunit HflK compare
H281DRAFT_00147 +1.2 2.7 uncharacterized domain 1-containing protein compare
H281DRAFT_05873 +1.0 2.6 amino acid ABC transporter ATP-binding protein, PAAT family compare
H281DRAFT_02580 +1.0 2.5 SnoaL-like domain-containing protein compare
H281DRAFT_01474 +0.9 1.3 isoquinoline 1-oxidoreductase, alpha subunit compare
H281DRAFT_00860 +0.9 2.4 phosphoserine phosphatase compare
H281DRAFT_01827 +0.9 1.5 hypothetical protein compare
H281DRAFT_06438 +0.9 2.2 hypothetical protein compare
H281DRAFT_03348 +0.9 2.3 amino acid ABC transporter ATP-binding protein, PAAT family compare
H281DRAFT_03790 +0.9 2.4 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
H281DRAFT_03454 +0.9 1.8 Ribulose-5-phosphate 4-epimerase/Fuculose-1-phosphate aldolase compare
H281DRAFT_03281 +0.9 2.1 Glycosyltransferase compare
H281DRAFT_05944 +0.9 1.6 DNA-binding transcriptional regulator, FadR family compare
H281DRAFT_01215 +0.8 2.4 hypothetical protein compare
H281DRAFT_05899 +0.8 2.6 hypothetical protein compare
H281DRAFT_04773 +0.8 2.5 Undecaprenyl-phosphate glucose phosphotransferase compare
H281DRAFT_02798 +0.8 2.2 hypothetical protein compare
H281DRAFT_03184 +0.8 1.5 cation diffusion facilitator family transporter compare
H281DRAFT_01632 +0.8 7.0 LuxR family transcriptional regulator, quorum-sensing transcription factor LasR compare
H281DRAFT_01659 +0.8 2.2 3-oxoacyl-[acyl-carrier protein] reductase compare
H281DRAFT_01711 +0.8 2.0 Na/Pi-cotransporter compare
H281DRAFT_05246 +0.8 2.3 Predicted membrane protein compare
H281DRAFT_02846 +0.8 2.0 Uncharacterized conserved protein YndB, AHSA1/START domain compare
H281DRAFT_00375 +0.8 2.1 benzoyl-CoA oxygenase, component A compare
H281DRAFT_00255 +0.7 2.0 hypothetical protein compare
H281DRAFT_05272 +0.7 1.7 monosaccharide ABC transporter membrane protein, CUT2 family compare
H281DRAFT_01580 +0.7 2.7 hypothetical protein compare
H281DRAFT_03252 +0.7 2.5 2,4-dihydroxyhept-2-enedioate aldolase (EC 4.1.2.-) compare
H281DRAFT_05755 +0.7 2.5 flagellar biosynthesis protein FlhG compare
H281DRAFT_01814 +0.7 2.0 transcriptional regulator, XRE family with cupin sensor compare
H281DRAFT_06102 +0.7 2.3 peptide/nickel transport system permease protein compare
H281DRAFT_01129 +0.7 2.8 2-aminoethylphosphonate-pyruvate transaminase compare
H281DRAFT_02552 +0.7 3.2 hypothetical protein compare
H281DRAFT_01463 +0.7 1.3 Steroid 5-alpha reductase family enzyme compare
H281DRAFT_03749 +0.7 1.0 carbohydrate ABC transporter ATP-binding protein, CUT1 family compare
H281DRAFT_03346 +0.7 1.5 Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family compare
H281DRAFT_01419 +0.7 2.0 Protein of unknown function (DUF2945) compare
H281DRAFT_01989 +0.7 2.2 Protein of unknown function (DUF2909) compare
H281DRAFT_02549 +0.7 1.3 putative oxidoreductase compare
H281DRAFT_01049 +0.7 1.4 Nucleoside-diphosphate-sugar epimerase compare
H281DRAFT_05743 +0.7 1.9 CheW protein compare
H281DRAFT_00989 +0.7 2.0 glycine betaine/proline transport system substrate-binding protein compare
H281DRAFT_05323 +0.6 1.5 hypothetical protein compare
H281DRAFT_05915 +0.6 1.4 hypothetical protein compare
H281DRAFT_06272 +0.6 0.8 uncharacterized protein compare
H281DRAFT_03414 +0.6 1.2 outer membrane surface antigen compare
H281DRAFT_00726 +0.6 1.9 acyl-CoA dehydrogenase compare
H281DRAFT_06555 +0.6 1.6 hypothetical protein compare
H281DRAFT_00051 +0.6 1.4 hypothetical protein compare
H281DRAFT_03820 +0.6 1.2 methylated-DNA-[protein]-cysteine S-methyltransferase compare
H281DRAFT_00281 +0.6 2.2 Spermidine synthase compare
H281DRAFT_05356 +0.6 2.1 hypothetical protein compare
H281DRAFT_01505 +0.6 1.2 Nucleoside-diphosphate-sugar epimerase compare
H281DRAFT_03836 +0.6 1.2 NitT/TauT family transport system ATP-binding protein compare
H281DRAFT_06108 +0.6 1.2 hypothetical protein compare
H281DRAFT_02449 +0.6 2.2 hypothetical protein compare
H281DRAFT_03255 +0.6 1.6 3,4-dihydroxyphenylacetate 2,3-dioxygenase compare
H281DRAFT_05767 +0.6 2.1 flagellar basal-body rod protein FlgG compare
H281DRAFT_01046 +0.6 1.5 aliphatic nitrilase compare
H281DRAFT_06046 +0.6 1.1 serine/threonine protein phosphatase 1 compare
H281DRAFT_03258 +0.6 1.1 5-carboxy-2-oxohept-3-enedioate decarboxylase HpaG1 subunit (EC 4.1.1.68) compare
H281DRAFT_00278 +0.6 2.4 Outer membrane protein OmpA compare
H281DRAFT_01633 +0.6 2.2 hypothetical protein compare
H281DRAFT_01396 +0.6 1.5 hypothetical protein compare
H281DRAFT_05902 +0.6 1.3 2-Methylisocitrate lyase, PEP mutase family compare
H281DRAFT_03834 +0.6 1.4 NitT/TauT family transport system substrate-binding protein compare
H281DRAFT_04598 +0.6 2.3 putative toxin-antitoxin system toxin component, PIN family compare
H281DRAFT_04894 +0.6 2.4 inner membrane transporter RhtA compare
H281DRAFT_02546 +0.6 1.4 transcriptional regulator, TetR family compare
H281DRAFT_06220 +0.6 1.2 hypothetical protein compare
H281DRAFT_06021 +0.6 1.5 NADH dehydrogenase compare
H281DRAFT_03314 +0.6 1.0 hypothetical protein compare
H281DRAFT_01409 +0.6 2.5 acetate kinase compare
H281DRAFT_01025 +0.6 1.0 transcriptional regulator, MarR family compare
H281DRAFT_03159 +0.5 1.0 hypothetical protein compare
H281DRAFT_00677 +0.5 1.6 3-oxoacyl-[acyl-carrier protein] reductase compare
H281DRAFT_01536 +0.5 3.0 putative membrane protein compare
H281DRAFT_05022 +0.5 1.2 two component transcriptional regulator, LuxR family compare
H281DRAFT_01311 +0.5 1.3 fructose-bisphosphate aldolase compare
H281DRAFT_04932 +0.5 2.9 MbtH protein compare
H281DRAFT_00340 +0.5 2.4 glutamine amidotransferase compare
H281DRAFT_03278 +0.5 0.9 Threonine dehydrogenase compare
H281DRAFT_00819 +0.5 1.0 competence protein ComEA compare
H281DRAFT_01923 +0.5 1.2 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) compare
H281DRAFT_01596 +0.5 2.1 3-oxoadipate CoA-transferase beta subunit compare
H281DRAFT_00644 +0.5 2.7 2-deoxy-D-ribonate 3-dehydrogenase (from data) compare
H281DRAFT_01717 +0.5 1.1 L-alanine-DL-glutamate epimerase compare
H281DRAFT_05088 +0.5 0.9 hypothetical protein compare
H281DRAFT_04876 +0.5 1.1 hypothetical protein compare
H281DRAFT_03087 +0.5 1.6 hypothetical protein compare
H281DRAFT_01377 +0.5 1.1 hypothetical protein compare
H281DRAFT_02118 +0.5 2.6 fructokinase compare
H281DRAFT_06194 +0.5 1.4 Proteolipid membrane potential modulator compare
H281DRAFT_03374 +0.5 2.2 hypothetical protein compare
H281DRAFT_05914 +0.5 2.0 hypothetical protein compare
H281DRAFT_05474 +0.5 2.0 Gluconate 2-dehydrogenase subunit 3 compare
H281DRAFT_01761 +0.5 2.1 conserved domain-containing protein compare
H281DRAFT_00355 +0.5 2.4 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain compare
H281DRAFT_03583 +0.5 1.2 hypothetical protein compare
H281DRAFT_05018 +0.5 1.4 TIGR03118 family protein compare
H281DRAFT_02459 +0.5 0.7 sarcosine oxidase subunit gamma compare
H281DRAFT_06528 +0.5 1.1 cobalt-precorrin 5A hydrolase compare
H281DRAFT_05293 +0.5 1.1 amino acid ABC transporter ATP-binding protein, PAAT family compare
H281DRAFT_04754 +0.5 2.6 xanthine dehydrogenase accessory protein XdhC compare
H281DRAFT_05934 +0.5 1.4 Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains compare
H281DRAFT_01801 +0.5 2.1 Predicted arabinose efflux permease, MFS family compare
H281DRAFT_05781 +0.5 1.9 flagellar hook-length control protein FliK compare
H281DRAFT_03859 +0.5 2.6 hypothetical protein compare
H281DRAFT_01319 +0.5 1.0 Uncharacterized protein, UPF0264 family compare
H281DRAFT_03192 +0.5 1.4 D-methionine transport system substrate-binding protein compare
H281DRAFT_05007 +0.5 1.9 type III secretion protein V compare
H281DRAFT_04846 +0.5 2.2 Putative flippase GtrA (transmembrane translocase of bactoprenol-linked glucose) compare
H281DRAFT_06365 +0.5 1.9 pilus assembly protein CpaC compare
H281DRAFT_01241 +0.5 2.0 mandelamide amidase compare
H281DRAFT_00949 +0.5 2.1 Glycosyltransferase, GT2 family compare
H281DRAFT_03345 +0.5 1.1 NHL repeat-containing protein compare
H281DRAFT_02467 +0.5 1.7 transcriptional regulator, AraC family with amidase-like domain compare
H281DRAFT_04875 +0.5 1.1 Nucleoside-diphosphate-sugar epimerase compare
H281DRAFT_01759 +0.5 2.0 rsbT co-antagonist protein RsbR compare
H281DRAFT_00347 +0.5 1.6 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family compare
H281DRAFT_03142 +0.5 1.4 Lipid-binding SYLF domain-containing protein compare
H281DRAFT_03395 +0.5 1.9 two component transcriptional regulator, LuxR family compare
H281DRAFT_00006 +0.5 0.9 hypothetical protein compare
H281DRAFT_01766 +0.5 1.8 cytochrome c oxidase subunit 2 compare
H281DRAFT_01272 +0.5 1.3 hypothetical protein compare
H281DRAFT_00115 +0.5 1.4 Uncharacterized conserved protein, DUF934 family compare
H281DRAFT_02612 +0.5 2.0 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase compare
H281DRAFT_05418 +0.5 2.2 Pimeloyl-ACP methyl ester carboxylesterase compare
H281DRAFT_01462 +0.5 1.3 cyclopropane-fatty-acyl-phospholipid synthase compare
H281DRAFT_01171 +0.5 2.3 alcohol dehydrogenase, propanol-preferring compare
H281DRAFT_06143 +0.5 1.8 hypothetical protein compare
H281DRAFT_03710 +0.5 1.9 Nitrate/nitrite transporter NarK compare
H281DRAFT_03451 +0.5 1.7 ABC-2 type transport system ATP-binding protein compare
H281DRAFT_05045 +0.5 2.3 amidase compare
H281DRAFT_03315 +0.5 0.9 HSP20 family protein compare
H281DRAFT_01795 +0.5 2.3 Protein N-acetyltransferase, RimJ/RimL family compare
H281DRAFT_00408 +0.5 1.7 Protein of unknown function (DUF1328) compare
H281DRAFT_01063 +0.5 1.7 hypothetical protein compare
H281DRAFT_02912 +0.5 1.2 Glycine zipper compare
H281DRAFT_05427 +0.5 2.3 Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domains compare
H281DRAFT_02181 +0.5 1.6 carbon-monoxide dehydrogenase small subunit compare
H281DRAFT_01480 +0.5 1.3 4-hydroxy-tetrahydrodipicolinate synthase compare
H281DRAFT_05390 +0.5 1.6 Predicted PurR-regulated permease PerM compare
H281DRAFT_03450 +0.5 1.6 ABC-2 type transport system permease protein compare
H281DRAFT_04861 +0.5 2.7 starch synthase compare
H281DRAFT_01352 +0.5 2.6 diguanylate cyclase/phosphodiesterase compare
H281DRAFT_00690 +0.5 1.5 NADPH:quinone reductase compare
H281DRAFT_03324 +0.5 1.4 Low affinity Fe/Cu permease compare
H281DRAFT_06462 +0.5 1.0 hypothetical protein compare
H281DRAFT_02563 +0.5 2.3 amino acid ABC transporter membrane protein, PAAT family compare
H281DRAFT_00384 +0.5 1.7 amino acid ABC transporter ATP-binding protein, PAAT family compare
H281DRAFT_01563 +0.5 2.0 MFS transporter, CP family, cyanate transporter compare
H281DRAFT_01094 +0.5 1.5 protein of unknown function (DUF3331) compare
H281DRAFT_02060 +0.5 1.5 phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein compare
H281DRAFT_01435 +0.5 1.6 H+/gluconate symporter compare
H281DRAFT_00776 +0.5 1.5 hypothetical protein compare
H281DRAFT_03839 +0.4 1.7 hypothetical protein compare
H281DRAFT_02197 +0.4 2.7 hypothetical protein compare
H281DRAFT_00763 +0.4 1.6 hypothetical protein compare
H281DRAFT_01243 +0.4 1.2 lipoprotein, YaeC family compare
H281DRAFT_00893 +0.4 1.4 DNA-binding transcriptional regulator, MarR family compare
H281DRAFT_04744 +0.4 1.7 enoyl-CoA hydratase compare
H281DRAFT_04157 +0.4 1.4 sorbitol ABC transporter membrane protein /mannitol ABC transporter membrane protein compare
H281DRAFT_04535 +0.4 1.0 quaternary ammonium compound-resistance protein SugE compare
H281DRAFT_03008 +0.4 2.1 formyl-CoA transferase compare
H281DRAFT_05754 +0.4 2.1 flagellar biosynthesis protein FlhF compare
H281DRAFT_00409 +0.4 1.5 bacterioferritin compare
H281DRAFT_01429 +0.4 2.1 Glycosyltransferases involved in cell wall biogenesis compare
H281DRAFT_06488 +0.4 1.0 EAL and modified HD-GYP domain-containing signal transduction protein compare
H281DRAFT_06545 +0.4 2.2 protein of unknown function (DUF4148) compare
H281DRAFT_02533 +0.4 1.6 Acyl dehydratase compare
H281DRAFT_02443 +0.4 0.9 alkylhydroperoxidase AhpD family core domain-containing protein compare
H281DRAFT_01382 +0.4 1.0 Cellulose biosynthesis protein BcsR compare
H281DRAFT_02562 +0.4 1.9 Glycine/D-amino acid oxidase (deaminating) compare
H281DRAFT_02195 +0.4 1.3 Protein of unknown function (DUF3185) compare
H281DRAFT_05075 +0.4 1.0 hypothetical protein compare
H281DRAFT_05208 +0.4 2.1 conserved hypothetical integral membrane protein compare
H281DRAFT_01001 +0.4 1.7 DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain compare
H281DRAFT_02654 +0.4 2.4 N-acetyl-gamma-glutamyl-phosphate reductase compare
H281DRAFT_00373 +0.4 1.5 2,3-dihydro-2,3-dihydroxybenzoyl-CoA ring cleavage enzyme compare
H281DRAFT_01007 +0.4 1.2 hypothetical protein compare
H281DRAFT_01274 +0.4 2.7 Outer membrane protein (porin) compare
H281DRAFT_03080 +0.4 1.2 NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family compare
H281DRAFT_01202 +0.4 2.6 methylmalonate-semialdehyde dehydrogenase [acylating] compare
H281DRAFT_05921 +0.4 1.8 Sugar phosphate permease compare
H281DRAFT_05485 +0.4 1.3 Group II intron, maturase-specific domain compare
H281DRAFT_01284 +0.4 1.8 transcriptional regulator, LysR family compare
H281DRAFT_02754 +0.4 1.4 Glucose/arabinose dehydrogenase, beta-propeller fold compare
H281DRAFT_01305 +0.4 2.1 hypothetical protein compare
H281DRAFT_02849 +0.4 1.3 Pimeloyl-ACP methyl ester carboxylesterase compare
H281DRAFT_05295 +0.4 1.4 transcriptional regulator, GntR family compare
H281DRAFT_05877 +0.4 1.1 RND family efflux transporter, MFP subunit compare
H281DRAFT_03130 +0.4 1.0 transcriptional regulator, XRE family with cupin sensor compare
H281DRAFT_02436 +0.4 2.1 flagellar hook-associated protein 2 compare
H281DRAFT_02747 +0.4 1.3 hypothetical protein compare
H281DRAFT_00729 +0.4 1.9 O-antigen ligase like membrane protein compare
H281DRAFT_00382 +0.4 1.6 amino acid ABC transporter substrate-binding protein, PAAT family compare
H281DRAFT_01731 +0.4 2.3 protein of unknown function (DUF4148) compare
H281DRAFT_02944 +0.4 1.3 aldehyde dehydrogenase (NAD+) compare


Specific Phenotypes

None in this experiment

For Paraburkholderia bryophila 376MFSha3.1 in lb experiments