Experiment set10IT025 for Bacteroides thetaiotaomicron VPI-5482

Compare to:

Varel_Bryant_medium_Glucose with 2-Mercaptopyridine N-oxide sodium salt 0.2 mM

200 most important genes:

  gene name fitness t score description  
BT3395 -4.5 -8.0 N-succinylglutamate kinase (EC 2.7.2.-) (from data) compare
BT3918 -4.3 -4.1 pyridoxal phosphate biosynthetic protein pdxJ (NCBI ptt file) compare
BT3184 -4.1 -15.8 L-aspartate oxidase (NCBI ptt file) compare
BT0532 -4.0 -2.8 anthranilate synthase component I (NCBI ptt file) compare
BT2074 -3.9 -7.5 ketol-acid reductoisomerase (NCBI ptt file) compare
BT1377 -3.9 -2.7 phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphohydrolase (NCBI ptt file) compare
BT1857 -3.9 -5.3 3-isopropylmalate dehydrogenase (NCBI ptt file) compare
BT2401 -3.8 -6.8 threonine synthase (NCBI ptt file) compare
BT2402 -3.7 -11.2 phosphoglycerate mutase (NCBI ptt file) compare
BT3759 -3.7 -10.0 N-succinylglutamylphosphate reductase (EC 1.2.1.-) (from data) compare
BT3164 -3.6 -9.4 quinolinate synthetase A (NCBI ptt file) compare
BT2837 -3.5 -15.1 2-oxoglutarate synthase subunit korB (NCBI ptt file) compare
BT2403 -3.5 -7.8 aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) (from data) compare
BT3733 -3.5 -12.2 arginosuccinate lyase (EC 4.3.2.1) (from data) compare
BT3760 -3.4 -4.7 arginosuccinate synthetase (EC 6.3.4.5) (from data) compare
BT1379 -3.4 -4.6 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
BT3549 -3.4 -5.1 N-succinylcitrulline desuccinylase (EC 3.5.1.-) (from data) compare
BT3361 -3.3 -6.3 erythronate-4-phosphate dehydrogenase (NCBI ptt file) compare
BT0531 -3.3 -2.2 anthranilate synthase component II (NCBI ptt file) compare
BT1860 -3.3 -5.4 3-isopropylmalate dehydratase large subunit (NCBI ptt file) compare
BT3193 -3.3 -15.1 putative coenzyme A transferase (NCBI ptt file) compare
BT3933 -3.3 -5.4 prephenate dehydrogenase (EC 1.3.1.13) (from data) compare
BT1861 -3.1 -6.3 2-isopropylmalate synthase (EC 2.3.3.13) (from data) compare
BT2415 -3.1 -11.6 aspartate aminotransferase (NCBI ptt file) compare
BT3757 -3.1 -6.8 pyrroline-5-carboxylate reductase (EC 1.5.1.2) (from data) compare
BT3718 -3.1 -10.6 gamma-glutamyl phosphate reductase (NCBI ptt file) compare
BT2078 -3.0 -12.4 dihydroxy-acid dehydratase (NCBI ptt file) compare
BT1843 -3.0 -5.0 adenylosuccinate synthetase (NCBI ptt file) compare
BT1859 -3.0 -2.1 3-isopropylmalate dehydratase small subunit (NCBI ptt file) compare
BT3320 -3.0 -8.9 dihydrodipicolinate reductase (NCBI ptt file) compare
BT2836 -3.0 -16.4 2-oxoglutarate synthase subunit korA (NCBI ptt file) compare
BT2077 -2.9 -4.8 acetolactate synthase large subunit (NCBI ptt file) compare
BT3717 -2.9 -3.4 N-succinylornithine carbamoyltransferase (EC 2.1.3.11) (from data) compare
BT1858 -2.8 -6.2 (R)-citramalate synthase (EC 2.3.1.182) (from data) compare
BT3761 -2.8 -5.2 N-succinylglutamate synthase (from data) compare
BT2153 -2.8 -3.2 putative Fe-S oxidoreductases (NCBI ptt file) compare
BT1153 -2.7 -4.2 phosphoserine aminotransferase (NCBI ptt file) compare
BT0202 -2.7 -3.2 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) compare
BT3253 -2.7 -1.9 phosphoribosylamine--glycine ligase (NCBI ptt file) compare
BT1374 -2.7 -5.4 diaminopimelate decarboxylase (EC 4.1.1.20) (from data) compare
BT1270 -2.7 -2.6 putative Na+/H+ antiporter (NCBI ptt file) compare
BT0530 -2.7 -2.6 anthranilate phosphoribosyltransferase (EC 2.4.2.18) (from data) compare
BT1476 -2.6 -2.5 aspartate aminotransferase (NCBI ptt file) compare
BT1746 -2.6 -2.4 conserved hypothetical protein (NCBI ptt file) compare
BT0528 -2.6 -3.8 phosphoribosylanthranilate isomerase (EC 5.3.1.24) (from data) compare
BT0738 -2.6 -3.0 serine hydroxymethyltransferase (NCBI ptt file) compare
BT0201 -2.6 -3.4 histidinol dehydrogenase (NCBI ptt file) compare
BT0200 -2.6 -3.0 ATP phosphoribosyltransferase (NCBI ptt file) compare
BT0527 -2.5 -2.4 tryptophan synthase alpha chain (NCBI ptt file) compare
BT1607 -2.5 -3.4 methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase (NCBI ptt file) compare
BT0876 -2.5 -1.7 conserved hypothetical protein (NCBI ptt file) compare
BT0700 -2.5 -3.8 GTP pyrophosphokinase (NCBI ptt file) compare
BT0892 -2.5 -2.3 dihydroorotate dehydrogenase (NCBI ptt file) compare
BT3758 -2.5 -5.0 N-succinylornithine aminotransferase (EC 2.6.1.81) (from data) compare
BT0891 -2.4 -2.2 dihydroorotate dehydrogenase electron transfer subunit (NCBI ptt file) compare
BT0704 -2.4 -2.6 phosphoribosylglycinamide formyltransferase 2 (NCBI ptt file) compare
BT1733 -2.3 -2.2 putative phosphoribosylformylglycinamidine synthase (NCBI ptt file) compare
BT0533 -2.2 -1.5 tryptophan synthase beta chain (NCBI ptt file) compare
BT1381 -2.2 -3.8 formyltetrahydrofolate deformylase (NCBI ptt file) compare
BT2932 -2.1 -2.0 transcriptional regulator (NCBI ptt file) compare
BT0529 -2.1 -1.4 indole-3-glycerol phosphate synthase (NCBI ptt file) compare
BT4211 -2.1 -1.4 putative phosphoribosylformylglycinamidine cyclo-ligase (NCBI ptt file) compare
BT3394 -2.1 -10.2 putative arginine decarboxylase (NCBI ptt file) compare
BT0475 -2.0 -1.9 putative phosphoheptose isomerase (NCBI ptt file) compare
BT2076 -2.0 -5.8 acetohydroxybutanoate synthase regulatory subunit (EC 2.2.1.6) (from data) compare
BT1363 -2.0 -1.8 DNA Pol III Epsilon Chain (NCBI ptt file) compare
BT1419 -1.9 -2.8 hypothetical protein (NCBI ptt file) compare
BT2843 -1.9 -4.6 integrase (NCBI ptt file) compare
BT3936 -1.9 -1.3 prephenate and/or arogenate dehydratase (EC 4.2.1.51) (from data) compare
BT0771 -1.9 -3.1 1,4-alpha-glucan branching enzyme (isoamylase or pullulanase type II) (NCBI ptt file) compare
BT3935 -1.9 -3.5 aminotransferase (NCBI ptt file) compare
BT3719 -1.9 -4.6 glutamate 5-kinase (EC 2.7.2.11) (from data) compare
BT1221 -1.8 -4.0 glucose-6-phosphate 1-dehydrogenase (NCBI ptt file) compare
BT1844 -1.8 -4.1 transcriptional regulator, putative iron uptake regulation protein (NCBI ptt file) compare
BT1375 -1.8 -9.6 aspartokinase (NCBI ptt file) compare
BT4562 -1.8 -1.2 hypothetical protein (NCBI ptt file) compare
BT3035 -1.8 -10.7 carboxy-terminal processing protease precursor (NCBI ptt file) compare
BT2418 -1.8 -4.0 hypothetical protein (NCBI ptt file) compare
BT2003 -1.7 -1.9 putative membrane peptidase (NCBI ptt file) compare
BT1380 -1.7 -1.6 imidazole glycerol phosphate synthase subunit hisH (NCBI ptt file) compare
BT1378 -1.7 -2.3 imidazole glycerol phosphate synthase subunit hisF (NCBI ptt file) compare
BT1559 -1.7 -5.0 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT1152 -1.6 -1.1 D-3-phosphoglycerate dehydrogenase (NCBI ptt file) compare
BT3260 -1.6 -2.7 DNA polymerase I (NCBI ptt file) compare
BT1444 -1.6 -2.4 conserved hypothetical protein (NCBI ptt file) compare
BT_2008 -1.6 -2.5 hypothetical protein (RefSeq) compare
BT3979 -1.6 -2.6 putative methyltransferase (NCBI ptt file) compare
BT4339 -1.6 -2.2 glutamine synthetase (NCBI ptt file) compare
BT3980 -1.6 -2.1 hypothetical protein (NCBI ptt file) compare
BT3268 -1.6 -1.5 glucose-inhibited division protein A (NCBI ptt file) compare
BT0203 -1.5 -1.5 histidine biosynthesis bifunctional protein hisB (NCBI ptt file) compare
BT3223 -1.5 -2.7 hypothetical protein (NCBI ptt file) compare
BT1752 -1.5 -1.0 hypothetical protein (NCBI ptt file) compare
BT1068 -1.5 -4.2 hypothetical protein (NCBI ptt file) compare
BT3371 -1.5 -2.9 putative glycosyltransferase yibD (NCBI ptt file) compare
BT3724 -1.5 -2.3 cationic outer membrane protein precursor (NCBI ptt file) compare
BT1336 -1.5 -3.8 putative translation initiation inhibitor (NCBI ptt file) compare
BT1341 -1.5 -3.4 UDP-glucose 6-dehydrogenase (NCBI ptt file) compare
BT3639 -1.4 -4.5 ThiF family protein, putative dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis (NCBI ptt file) compare
p5482_02 -1.4 -5.1 hypothetical protein (NCBI) compare
BT4018 -1.4 -2.4 hypothetical protein (NCBI ptt file) compare
BT0827 -1.4 -3.1 hypothetical protein (NCBI ptt file) compare
BT3373 -1.4 -3.3 spermidine n1-acetyltransferase (NCBI ptt file) compare
BT3554 -1.4 -3.3 conserved hypothetical protein (NCBI ptt file) compare
BT1470 -1.4 -1.8 putative two-component system sensor histidine kinase (NCBI ptt file) compare
BT1220 -1.4 -1.8 6-phosphogluconolactonase (NCBI ptt file) compare
BT2172 -1.4 -8.0 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) compare
BT1970 -1.4 -7.4 glutamate dehydrogenase (NCBI ptt file) compare
BT3372 -1.4 -4.6 glycosyltransferase (NCBI ptt file) compare
BT4590 -1.3 -2.7 conserved hypothetical protein (NCBI ptt file) compare
BT0739 -1.3 -2.0 hypothetical protein (NCBI ptt file) compare
BT0967 -1.3 -0.8 hypothetical protein (NCBI ptt file) compare
BT1342 -1.3 -4.7 putative UDP-glucuronic acid epimerase (NCBI ptt file) compare
BT3220 -1.3 -7.4 TPR-repeat-containing protein (NCBI ptt file) compare
BT0519 -1.3 -4.0 hypothetical protein (NCBI ptt file) compare
BT2742 -1.3 -1.7 integrase, site-specific recombinase (NCBI ptt file) compare
BT1343 -1.3 -3.7 putative capsule biosynthesis protein (NCBI ptt file) compare
BT4191 -1.2 -7.0 hypothetical protein (NCBI ptt file) compare
BT3911 -1.2 -2.4 malate dehydrogenase (NCBI ptt file) compare
BT0542 -1.2 -1.9 conserved hypothetical protein (NCBI ptt file) compare
BT1617 -1.2 -2.7 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT1356 -1.2 -3.2 putative capsule polysaccharide export protein (NCBI ptt file) compare
BT4561 -1.2 -3.7 conserved hypothetical protein, putative integral membrane protein (NCBI ptt file) compare
BT2173 -1.2 -5.4 hypothetical protein (NCBI ptt file) compare
BT1094 -1.2 -1.7 hypothetical protein (NCBI ptt file) compare
BT2375 -1.2 -2.5 hypothetical protein (NCBI ptt file) compare
BT3794 -1.2 -3.7 hypothetical protein (NCBI ptt file) compare
BT1351 -1.2 -1.9 glucose-1-phosphate cytidylyltransferase (NCBI ptt file) compare
BT4610 -1.2 -1.6 RecA (NCBI ptt file) compare
BT1347 -1.2 -3.0 conserved hypothetical protein (NCBI ptt file) compare
BT2129 -1.2 -4.7 aspartate--ammonia ligase (NCBI ptt file) compare
BT1055 -1.1 -1.8 pyruvate formate-lyase activating enzyme (NCBI ptt file) compare
BT0100 -1.1 -2.5 hypothetical protein (NCBI ptt file) compare
BT0799 -1.1 -1.5 hypothetical protein (NCBI ptt file) compare
BT1330 -1.1 -2.0 conserved hypothetical protein (NCBI ptt file) compare
BT3074 -1.1 -4.5 conserved hypothetical protein (NCBI ptt file) compare
BT1608 -1.1 -4.4 capsule biosynthesis protein capA (NCBI ptt file) compare
BT4699 -1.1 -2.1 putative hydrolase, haloacid dehalogenase-like hydrolase (NCBI ptt file) compare
BT3376 -1.1 -4.4 nucleotide sugar transaminase (NCBI ptt file) compare
BT2080 -1.1 -3.0 L-cysteine desulfidase cdsB (from data) compare
BT2034 -1.1 -3.0 two-component system response regulator (NCBI ptt file) compare
BT4644 -1.1 -2.4 putative anti-sigma factor (NCBI ptt file) compare
BT1202 -1.1 -1.0 UDP-N-acetylglucosamine 2-epimerase (NCBI ptt file) compare
BT3374 -1.0 -5.2 putative carbamoyl-phosphate-synthetase (NCBI ptt file) compare
BT4403 -1.0 -2.1 putative anti-sigma factor (NCBI ptt file) compare
BT0848 -1.0 -2.0 hypothetical protein (NCBI ptt file) compare
BT3370 -1.0 -0.7 putative glycosyltransferase yibD (NCBI ptt file) compare
BT0941 -1.0 -2.2 hypothetical protein (NCBI ptt file) compare
BT1894 -1.0 -4.2 TPR-repeat-containing proteins (NCBI ptt file) compare
BT4002 -1.0 -1.4 ATPase, ParA family (NCBI ptt file) compare
BT0875 -1.0 -2.4 beta-ureidopropionase (NCBI ptt file) compare
BT3072 -1.0 -4.4 collagenase precursor (NCBI ptt file) compare
BT0649 -1.0 -1.9 thiamine biosynthesis protein ThiH (NCBI ptt file) compare
BT4612 -1.0 -4.8 conserved hypothetical protein (NCBI ptt file) compare
BT1137 -1.0 -1.2 hypothetical protein (NCBI ptt file) compare
BT1367 -1.0 -2.2 hydrolase, metal-dependent (NCBI ptt file) compare
BT4490 -1.0 -2.3 hypothetical protein (NCBI ptt file) compare
BT3981 -1.0 -2.4 hypothetical protein (NCBI ptt file) compare
BT4310 -1.0 -6.3 NADPH-dependent glutamate synthase small chain (NCBI ptt file) compare
BT1345 -1.0 -2.4 glycosyltransferase (NCBI ptt file) compare
BT4027 -1.0 -1.4 hypothetical protein (NCBI ptt file) compare
BT1348 -1.0 -3.4 CDP-abequose synthase (NCBI ptt file) compare
BT4563 -1.0 -1.5 hypothetical protein (NCBI ptt file) compare
BT3762 -1.0 -2.6 arginine repressor, transcriptional regulator of arginine metabolism (NCBI ptt file) compare
BT1983 -1.0 -5.3 hemolysin III (NCBI ptt file) compare
BT1309 -1.0 -2.2 hypothetical protein (NCBI ptt file) compare
BT0545 -1.0 -1.5 nitrogen regulatory protein P-II (NCBI ptt file) compare
BT4551 -1.0 -1.6 putative GTPase, ThdF family (NCBI ptt file) compare
BT3075 -1.0 -5.9 NAD-dependent epimerase/dehydratase family protein (NCBI ptt file) compare
BT2170 -1.0 -2.5 hypothetical protein (NCBI ptt file) compare
BT0778 -1.0 -1.8 conserved hypothetical protein (NCBI ptt file) compare
BT2546 -1.0 -3.2 transcriptional regulator (NCBI ptt file) compare
BT2946 -0.9 -0.9 putative glycosyltransferase (NCBI ptt file) compare
BT1361 -0.9 -3.8 DNA repair protein recN (Recombination protein N) (NCBI ptt file) compare
BT1422 -0.9 -2.0 conserved hypothetical protein (NCBI ptt file) compare
BT0923 -0.9 -1.1 putative periplasmic protein (NCBI ptt file) compare
BT3224 -0.9 -2.9 putative lysine decarboxylase (NCBI ptt file) compare
BT3819 -0.9 -2.6 conserved hypothetical protein (NCBI ptt file) compare
BT3210 -0.9 -2.3 cell division protein FtsX (NCBI ptt file) compare
BT1193 -0.9 -2.8 conserved hypothetical protein (NCBI ptt file) compare
BT0629 -0.9 -2.4 Mn2+ and Fe2+ transport protein (NCBI ptt file) compare
BT0119 -0.9 -2.0 hypothetical protein (NCBI ptt file) compare
BT1979 -0.9 -2.0 Meso-diaminopimelate D-dehydrogenase (NCBI ptt file) compare
BT0195 -0.9 -2.6 glycerophosphoryl diester phosphodiesterase (NCBI ptt file) compare
BT1576 -0.9 -1.2 conserved hypothetical protein, with a conserved domain (NCBI ptt file) compare
BT4570 -0.9 -3.0 hypothetical protein (NCBI ptt file) compare
BT4258 -0.9 -3.9 putative 5-formyltetrahydrofolate cyclo-ligase (NCBI ptt file) compare
BT2122 -0.9 -0.9 lysyl-tRNA synthetase (NCBI ptt file) compare
BT0882 -0.9 -1.1 conserved hypothetical protein (NCBI ptt file) compare
BT4271 -0.9 -1.8 hypothetical protein (NCBI ptt file) compare
BT1355 -0.9 -3.9 hypothetical protein (NCBI ptt file) compare
BT3211 -0.9 -1.6 conserved hypothetical protein (NCBI ptt file) compare
BT0756 -0.9 -1.3 iduronate 2-sulfatase precursor (NCBI ptt file) compare
BT0414 -0.9 -1.4 sulfate adenylyltransferase subunit 2 (NCBI ptt file) compare
BT1972 -0.9 -5.5 phosphoenolpyruvate synthase/pyruvate phosphate dikinase (NCBI ptt file) compare
BT0887 -0.9 -1.1 conserved hypothetical protein (NCBI ptt file) compare
BT0468 -0.9 -2.0 putative F420H2-dehydrogenase 40 kDa subunit (NCBI ptt file) compare
BT4703 -0.8 -2.3 chloromuconate cycloisomerase (NCBI ptt file) compare
BT3375 -0.8 -3.6 aspartate aminotransferase (NCBI ptt file) compare
BT0692 -0.8 -1.4 putative calcineurin superfamily phosphohydrolase (NCBI ptt file) compare


Specific Phenotypes

None in this experiment

For Bacteroides thetaiotaomicron VPI-5482 in stress experiments

For stress 2-Mercaptopyridine N-oxide sodium salt across organisms